Basic Information

Insect: Eudemis profundana
Gene Symbol: -
Assembly: GCA_947034915.1
Location: CAMQQJ010000193.1:1191470-1193101[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.4 1.1e+02 4.8 2.4 2 23 213 235 210 235 0.87

2 10 6e-05 0.0048 18.5 0.8 1 23 241 263 241 263 0.99

3 10 0.0011 0.089 14.5 8.9 3 23 271 292 270 292 0.96

4 10 0.00041 0.033 15.9 0.1 2 21 299 318 298 319 0.94

5 10 5.6e-05 0.0045 18.6 5.8 2 23 338 359 337 359 0.96

6 10 1.6e-06 0.00013 23.4 2.5 1 23 366 388 366 388 0.98

7 10 0.00087 0.07 14.9 0.4 1 23 394 416 394 416 0.97

8 10 1.1e-05 0.00087 20.8 2.1 1 23 422 444 422 444 0.96

9 10 0.00011 0.0091 17.6 3.2 1 23 450 472 450 472 0.98

10 10 0.00017 0.014 17.1 4.1 1 23 478 501 478 501 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.4	1.1e+02	4.8	2.4	2	23	213	235	210	235	0.87
2	10	6e-05	0.0048	18.5	0.8	1	23	241	263	241	263	0.99
3	10	0.0011	0.089	14.5	8.9	3	23	271	292	270	292	0.96
4	10	0.00041	0.033	15.9	0.1	2	21	299	318	298	319	0.94
5	10	5.6e-05	0.0045	18.6	5.8	2	23	338	359	337	359	0.96
6	10	1.6e-06	0.00013	23.4	2.5	1	23	366	388	366	388	0.98
7	10	0.00087	0.07	14.9	0.4	1	23	394	416	394	416	0.97
8	10	1.1e-05	0.00087	20.8	2.1	1	23	422	444	422	444	0.96
9	10	0.00011	0.0091	17.6	3.2	1	23	450	472	450	472	0.98
10	10	0.00017	0.014	17.1	4.1	1	23	478	501	478	501	0.98

Sequence Information

Coding Sequence: ATGTCGGACCAAGTGGACACTTACTGTCGCCTGTGCGCGGAAACAACACCAATAACACAGCTAATATCGGCAGAAGACGACGTCGCTAGGAGCTCGAAAGTTTTAACAAAAATGCAGTGGATAAACATCGATGTTTCGTCTAATATCCTACCAACCACCATCTGTTTCTCCTGTTTCGACTTATTAGAGAAAACCTGGGCGTTCTTGCACAACGCACGCAACGCGCAAATCAAGTTAACGTCCATTTTTGTTAAGAAAACAACCGACGATCAAGGTGACTCAAATTCTTTAGGCTCGAAGTCGGCAGATGAAGATACGTCTTTAAAACCTGTGGATAAGAATTGGGAGGAGTTCCAGACGACAAAACAAGAGGTGAAAGTAGAAAATAGTGATCATTTAGAGGGTATAACGACCGTAGACGCCAGCACACTTCTGCAGATCGACTTAATCCATGTCAAATCTGAACGTGTCAGCGAAGACGAACTTTACGACAACTCCATAGGCTCCGACGGTTTTACAAGTGACAGTAACGCTCCATTGGTGGAAAAGAAGAAGAAATCTAAACGTAAAAAGGGTGAATACTTAAACGACTTGGATGTGTCAGACTTATCTTTAACTTGGGAGCAGTACATGTGCCGCTGCGCCCAATGCGATGCTCAATGCAAGAACATGGAGTCCCTCCAACTCCATTCTTTGCAAATCCACTCGTGCTGCTGCGTTTTCAAGTGTTTAGACTGCGGGAAAGTAATTTCAAGCTACCGCTCTTTTATTAACCATGTTCGTACTCATAACACAAGCCTCAGACGCTGCTGTGAATATTGCAATAAGCATTTCTCATCGTCATCATgcttaaaaaaacatgtttcgacCATGCACCGGAAGTCCTACTTAACTACATGCTCTAACTGTGGAACCAATTTTGAAACACCAGAACAACTACAAGACCATATCCTACTGTTCTCCAAAGGCCAAAAGAAACATCGTAAACAGGAAAACTTAGAGCTGGACCTGAAATGCGAGCATTGTAACAAAGAATTCAAATCCCGGAGCAATTTACATCAGCATAAACTTGTTCATATGGAACGTAATAGAGAATTTGCTTGCCATGTTTGCGGTAAAATGTTCTTCACCAAAGGCACACTAAGTACTCATATGAATACACATGAAGACACAAAGCCACATAAGTGCGAGTTCTGTCCAATGGCATTCCGGGCGCGAGGAAACCTAGTATCCCACATAAGCCTCCATTCGGGATCGAAGCCTTTTGTTTGCGAGCAATGCGGAAAAAGCTTCAGAGTGAAGCGCCACTTGAAATCACATTCCATAGTCCATACGGATCTCATGCCGTATGTTTGTGAGTATTGCAATAAGCAGTTCCGTTTCAAGACACGGTTGAACCTTCATCTAAGACAGCATACGGGAGCTAAACCGTACACCTGTCTTTTCTGCCAAAGAGACTTCACGAATGGATCCAACTTCAAGAAACACATGAAAAGACGACACAACATTGACACGTCTAAGAAGAAATTCAATAATGTTAATAAAGAGGAACTTGATAATCAAGCGACGATTCAAGCAGTTCAGGCAACAGTCCAAGCAACGATTCAGGCAATACAAGCAACACAGGCATGA
Protein Sequence: MSDQVDTYCRLCAETTPITQLISAEDDVARSSKVLTKMQWINIDVSSNILPTTICFSCFDLLEKTWAFLHNARNAQIKLTSIFVKKTTDDQGDSNSLGSKSADEDTSLKPVDKNWEEFQTTKQEVKVENSDHLEGITTVDASTLLQIDLIHVKSERVSEDELYDNSIGSDGFTSDSNAPLVEKKKKSKRKKGEYLNDLDVSDLSLTWEQYMCRCAQCDAQCKNMESLQLHSLQIHSCCCVFKCLDCGKVISSYRSFINHVRTHNTSLRRCCEYCNKHFSSSSCLKKHVSTMHRKSYLTTCSNCGTNFETPEQLQDHILLFSKGQKKHRKQENLELDLKCEHCNKEFKSRSNLHQHKLVHMERNREFACHVCGKMFFTKGTLSTHMNTHEDTKPHKCEFCPMAFRARGNLVSHISLHSGSKPFVCEQCGKSFRVKRHLKSHSIVHTDLMPYVCEYCNKQFRFKTRLNLHLRQHTGAKPYTCLFCQRDFTNGSNFKKHMKRRHNIDTSKKKFNNVNKEELDNQATIQAVQATVQATIQAIQATQA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00657545;
90% Identity: iTF_00773116; iTF_00149714;
80% Identity: -