Epro032013.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eudemis profundana
Gene Symbol
TY3B-I
Assembly
GCA_947034915.1
Location
CAMQQJ010000364.1:815852-825008[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 1.8e-06 0.00014 23.3 3.8 1 23 960 982 960 982 0.98
2 11 2e-06 0.00016 23.1 0.7 1 23 1011 1033 1011 1033 0.98
3 11 7.4 5.9e+02 2.5 1.2 3 23 1041 1061 1039 1061 0.93
4 11 3.5e-05 0.0028 19.3 3.8 1 23 1067 1089 1067 1089 0.98
5 11 1.4e-05 0.0011 20.5 1.5 1 23 1094 1116 1094 1116 0.99
6 11 2.4e-05 0.0019 19.8 4.7 1 23 1122 1144 1122 1144 0.98
7 11 0.00071 0.057 15.1 1.2 1 23 1152 1174 1152 1174 0.97
8 11 7.3e-06 0.00058 21.4 1.8 1 23 1180 1202 1180 1202 0.97
9 11 0.00054 0.043 15.5 0.7 1 23 1208 1230 1208 1230 0.99
10 11 0.00071 0.057 15.1 0.0 1 23 1236 1258 1236 1258 0.97
11 11 1.1 90 5.1 0.2 6 22 1268 1284 1266 1284 0.94

Sequence Information

Coding Sequence
ATGTCGTTGGAGCCTCCAAGTCACACCGTGGTCGTTAAACAAGAAGTGTGTTGGGAGGAAGAGGAGGAACAGCGCGCGTGCCAGGAGGTGACCGTGTTTATAAAGCGCGAGTCAGAGGAACCAGAGCAGGCAGAGGATGCATCTTACAAGCGAGAGCCAGAAGCAGAATCTGGCAACAATGTTGGACCAGTGTGTGTCAAGACAGAGGTTGAGGAAGCGGCGCCAGAGACAGGGGAGCGGCCTGAGCCGCCCAGTTTGAAGATAGCGCCAGGGGAGTGCGGGCTGCTCTGGCCGGTGTATGCAACCTTCGAAGTGCCGGAATCTTTAAATAAGAAAATAGATTATCAATGTCAGCAGATTTCCGAATTAACGGCCAGATTGAACTCTTTGGAAGGGAAACCGTTAGATATTAGTCGTGAGGAGGGTGAATCAAAGGTCGATCAAGACGTCCGTGAGGAAATTACCACATTACTGCAGAAGCATAAAAGCGTCGTAACGGAAAAGTTAGGTAAAACAAACATTTTGGAGTATGAGATACGATTGACAGATAATATTCCGGTTCGTTCGCGATTTTATCCCTTGTCACCGCCCAAGTTATCTGAAATGAAAAATCATATCAATGAATTATTAGAGAAAGACGTTATCGAGAAGAGCTCCTCGCCGTATGCGTCCCCGGCGTTTCTTGTGGACAAAGCGGGGGGCGGCCGACGGTTGTGCTGTGACTACCGCGCGCTTAATAAAAAGATAGTATACGACAGCTATCCTATGCCGGCCGTTGACACTATTTTCCAATTCTTAGGAAATGCGAAGTACTTTTCAAAGATAGACTTAAACAAATCATTCTATCAAGTACCCTTGACGCAGTCGTCGAGAGAAAAAACTGCATTTACTACTCCTACGGGTTTATTTCACTTTAAATACGTTCCGTTTGGATTATGTGTAAGTCCACAGTCGTTAAATAGGGTTGTCGATTTGGTATTCGGTGAgagtaaatataaatatgtcatTCCATTCGTCGACGATTTGTGCGTATATTCGAACACTTTAGATGAACACTTAAGGCATTTAGATCAAGTATTTACCGCTTTGGGGGACGCCGGATTAACAGTTAACCCAAAGAAATTAGAATTGTGCAAAGAGTCAGTAACCTTCCTAGGTTATGTAATATCATCGAAGGGTCTGTCAGTGGACCCGGATAAGGTCAAGGCCGTTTTAGATTATCCGACACCGTTAAATTTGAAGCAATTAAAAACGTTTTTAGGAATGACTAGTTTCTACGCTAAATTCATACCCAACTATGCTGCGATTGCTGAgccattaaattatttaaaaaaaaaagacgtCACCTTTCAGTGGAGCTTGGACCAAAACGAGgcgtttaaaaaattaaaacaagaactCATATCCCCAAATGTTTTACGATTTCCGGACTTTGAGAAGAAATTCATTCTTCAAACGGACGCTTCCGGGACGGCGCTCGGGGCCGTCTTACAGCAAGAGTCAGAGGGCACTCTGGCGCCGATAGCGTTCGCGTCACGCTTGCTGGATCCGTCCGAGCGTCGCCGCAGCGCGTACGAGCTTGAGTGCGCAGCCGCCGTCTTTGGAGTCGAAAAGTTCAAAACTTACTTAGAGGTTGCTCCGTTCGAGTTGCAAACCGATAATGCAGCCTTGACGTGGTTGTTTGAACATCCGAAGCAAATAGGCAAACTAGGGCGATGGATCCTGTTCTTATCAAGATTTAAATTCGAAATAAGACATATTCGCGGCTCAAATAATAACGTGGCAGATGCCCTGAGCAGAATGTATGAAGGAAGGGAGGCTGGCATAGAGTGCGCAATTTTAAGGGACTATCCCGTGACGTCTAAGTCATTACAGTGTCACCAACTCAATGATGTGTTTTGTAACGATAAGATAGTAGACATTAACAGTGGGAAACGTCTACAGGGTTTTAAAATGAAGGATAATCTTCTATGTAAGAAAATTGCCAGAGGCAATAAGTGGCGTATTGTACTACCGGAGCACTTAAAGGAAGTGGTATTAAATTATTATCATGATCAGGACATCGCTGGACATTTTGGGGtaacaaaaacatttaaaaagatTTCGAACATTTTTTGGTGGGAAAAAATATCGAAGGATGTGAAGGATTATGTCCGAGGTTGCAAATTATGTCAAACATCAAAACCTAACAACATCAAGCCGGCAGGCCTGATGGTGTCCGAGGTTCCGCGTGAAACATGGGATACAGTTTATATAGATTATAAGGGCCCCTTACCACGTTCAAGGAATGGTAATGTTTACATTTTGGCGTTAATGGACTCGTTTTCAAAATGGGTAGAATTAATTCCGGTGCGTGCGGCTAACGCGGCGACGACAGTGCGCGAGCTGTCGCGGCAAGTGTGGGCGCGCTATGGCCCGCCGCGCAAGCTGGTTGCTGACAATGCGAAGCATTTCACGGCCGATGTATGTAAGGAAATGTGCCGCGGATGGGGTATACGATTGACCCATATATCACCTCATTTCCCACAGGCAAACGCAGTTGAGAGAATTAATCGCAATTTAGCATcgatgttaaaaatatattgtagAAATTCGACAAAGACATGGGATGAATTTTTGCCGCAGTTCCAACTAGCAATAAATTCTACCTTGCATGACAGTTTAAACGCGACGCCTGCTAAAATATTTTTGGGTAGGGATATTAAGTCACCTTTAGAAGTAAAATGGGAATTGGACAAATGTTTAAATTCTTTAAACCCGAACGACGTTACCTCATACGCAGTGCCGGTAAGCAAGCAGGAGCCAAGCGCCAAGGCGGGCGCCAAAGCACCAAGCAAGCGCAGGCCCCCCCGCCCGAAAGACATCCAAGCGGAGTTCTACGAGTGCCACGACTGTGGCAAGCGGTACACAAAGAAGGACAGCCTCCGGTCGCATCTGAGGAACCATCCCGGCGCCCCGAGCAGGTGCGGCGTCTGCGGCAAGCTCGTCATAGGGCTGCGGCAGCACATGGCCATCCACACGATACGCGAGTACCCCTGCCCCGTGTGCCAGAAGAATTTCAAGAGGAAAGAATCACTCAGGATACACGTCAAGAGTCACGAAGGCGAGCGGCCGTTCGGCTGCGACCACTGTTCTTTGCGTTTCCTCACGAAGATCAACGCGAAGCGGCACGAGGTCGTCCATAATGCTGACCGCCCTTACGAGTGCGACGTCTGCCAGAAGCGCTTCAAACACTCCAACAACCTCACCGACCACAGGAAACTGCACTCGGACAAGCGCTTCCAGTGCGACATCTGCCACCGACAGTTCGCCATGAAGGCGTATCTCACCGACCACATGCGGGTCCACACCGGGGAGAGGGGCTACGCGTGTGATCTATGTGACAAGAAGTGCCGGAGCCGGACGAATCTGAACAGACACCGAAGAACACACGTAGGGGTAGCGAGGAAGCTCCACGAGTGTGCCGAGTGCAAAGCTACCTTCACGACCGCGTTCTCCCTCCGCTCCCACCGCCTGGTCCACACCGGGGAGCGGCCTCACGAGTGCGATATCTGCGGGAAGCGCTTCGCCCTAAAATCCAACCTGAAAGAACACCGGAAGCTGCACACGGGCCAGCCGAAGTACAAGTGCAAAGTGTGTAAAGAACAGTTCGAGATTCGCGGGTATCTGCGAGTGCACATGTTGTCGCACGGGGCTCCGCCGCGGTACAGCTGTGCCACGTGCGGGCGCGGGTTCGACAAGCCCTCGGCGCTGGCGGAGCACGCGCGGGCGCACGGCGGCACGCGAGAGTTCCGGTGTAGATGCGGCGCTGACTACGTGCACGCGGCCTCGCTGTGGCGGCACCGGCGCACGTGCGACGAGGCGGGGAGCGACCCCGACGAGGAGTCGCGCGCCGGTGCCGCGGGGGCGGGGAGCGACACGGATGACAAAAAGATTGTCGCTACGGACGTGGGAAGTGATGAACGGGGGGCCGAAAATACTGACGCGGTCTAA
Protein Sequence
MSLEPPSHTVVVKQEVCWEEEEEQRACQEVTVFIKRESEEPEQAEDASYKREPEAESGNNVGPVCVKTEVEEAAPETGERPEPPSLKIAPGECGLLWPVYATFEVPESLNKKIDYQCQQISELTARLNSLEGKPLDISREEGESKVDQDVREEITTLLQKHKSVVTEKLGKTNILEYEIRLTDNIPVRSRFYPLSPPKLSEMKNHINELLEKDVIEKSSSPYASPAFLVDKAGGGRRLCCDYRALNKKIVYDSYPMPAVDTIFQFLGNAKYFSKIDLNKSFYQVPLTQSSREKTAFTTPTGLFHFKYVPFGLCVSPQSLNRVVDLVFGESKYKYVIPFVDDLCVYSNTLDEHLRHLDQVFTALGDAGLTVNPKKLELCKESVTFLGYVISSKGLSVDPDKVKAVLDYPTPLNLKQLKTFLGMTSFYAKFIPNYAAIAEPLNYLKKKDVTFQWSLDQNEAFKKLKQELISPNVLRFPDFEKKFILQTDASGTALGAVLQQESEGTLAPIAFASRLLDPSERRRSAYELECAAAVFGVEKFKTYLEVAPFELQTDNAALTWLFEHPKQIGKLGRWILFLSRFKFEIRHIRGSNNNVADALSRMYEGREAGIECAILRDYPVTSKSLQCHQLNDVFCNDKIVDINSGKRLQGFKMKDNLLCKKIARGNKWRIVLPEHLKEVVLNYYHDQDIAGHFGVTKTFKKISNIFWWEKISKDVKDYVRGCKLCQTSKPNNIKPAGLMVSEVPRETWDTVYIDYKGPLPRSRNGNVYILALMDSFSKWVELIPVRAANAATTVRELSRQVWARYGPPRKLVADNAKHFTADVCKEMCRGWGIRLTHISPHFPQANAVERINRNLASMLKIYCRNSTKTWDEFLPQFQLAINSTLHDSLNATPAKIFLGRDIKSPLEVKWELDKCLNSLNPNDVTSYAVPVSKQEPSAKAGAKAPSKRRPPRPKDIQAEFYECHDCGKRYTKKDSLRSHLRNHPGAPSRCGVCGKLVIGLRQHMAIHTIREYPCPVCQKNFKRKESLRIHVKSHEGERPFGCDHCSLRFLTKINAKRHEVVHNADRPYECDVCQKRFKHSNNLTDHRKLHSDKRFQCDICHRQFAMKAYLTDHMRVHTGERGYACDLCDKKCRSRTNLNRHRRTHVGVARKLHECAECKATFTTAFSLRSHRLVHTGERPHECDICGKRFALKSNLKEHRKLHTGQPKYKCKVCKEQFEIRGYLRVHMLSHGAPPRYSCATCGRGFDKPSALAEHARAHGGTREFRCRCGADYVHAASLWRHRRTCDEAGSDPDEESRAGAAGAGSDTDDKKIVATDVGSDERGAENTDAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-