Basic Information

Insect: Eudemis profundana
Gene Symbol: -
Assembly: GCA_947034915.1
Location: CAMQQJ010000781.1:518775-522205[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 5.5e-06 0.00044 21.8 1.7 1 23 218 240 218 240 0.98

2 9 5.2e-08 4.2e-06 28.1 1.6 3 23 248 268 246 268 0.98

3 9 0.00018 0.014 17.0 0.3 1 23 274 296 274 296 0.98

4 9 1.9e-05 0.0015 20.1 1.7 1 23 302 324 302 324 0.99

5 9 3.9e-05 0.0032 19.1 1.7 2 23 507 528 506 528 0.96

6 9 5.1e-09 4.1e-07 31.3 1.6 1 23 534 556 534 556 0.98

7 9 0.0043 0.35 12.7 0.6 3 23 564 584 562 584 0.97

8 9 0.00011 0.0089 17.7 1.5 1 23 590 612 590 612 0.99

9 9 0.11 8.6 8.3 0.8 1 23 618 642 618 642 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	5.5e-06	0.00044	21.8	1.7	1	23	218	240	218	240	0.98
2	9	5.2e-08	4.2e-06	28.1	1.6	3	23	248	268	246	268	0.98
3	9	0.00018	0.014	17.0	0.3	1	23	274	296	274	296	0.98
4	9	1.9e-05	0.0015	20.1	1.7	1	23	302	324	302	324	0.99
5	9	3.9e-05	0.0032	19.1	1.7	2	23	507	528	506	528	0.96
6	9	5.1e-09	4.1e-07	31.3	1.6	1	23	534	556	534	556	0.98
7	9	0.0043	0.35	12.7	0.6	3	23	564	584	562	584	0.97
8	9	0.00011	0.0089	17.7	1.5	1	23	590	612	590	612	0.99
9	9	0.11	8.6	8.3	0.8	1	23	618	642	618	642	0.94

Sequence Information

Coding Sequence: ATGGTGGAAAGTAACATTCGTAACAACGCACCGAGCATCATAAAGAATACGACAGCACCTTACGTCCTGTACAAAGATGGCGTGGAGAGAGCCCCACCGGGAACGCAGTGGGGTGGAGGAGTGCTGGACGGCGGGTACCAACCCATGCAGCATCAGAGTCCGGGCGGGCCTTCGCCACAGCCCGAGCCGCAGCTGGCCTCGCCGGCGCCATCGCCGTACCCGCCCGCACCTCCGCCCCCCGACCAGGCCGCAGAGGACGCCGCGCAACAACTCGCGCAACAACAGGCCCAGCAGCAAGTCCAGCAGCAACAACAACAGACCTCTCCCGACCACATGCAGGTCGAACAGCAGCTACAGAACCAGTCCCAAACCCAGCCCACTCAGGACCACCTCGACCGCGGACCCTGCTTCATACCGCAGCCAGACTTACAACAGCAGTACACGCCATACTTCAAAGAAACGAGACCCGCTAGCCACATGCTAGGCGGCGGCGGCTTCCCGCTCCACTATTTGAAACAGAACGGAGGAGTTCTCTCGCTAGAGGGACCGTTGGACCAGTACGGGGCCCCCGAACTCCGTCATTTACCGGATATCGTGCAACCGGAGCCGCCGAAGCCGCGGAAGCACAACCCGAACTCTGAGCTGAGGCTATTCAAATGCCTGACGTGCGGCAAAGACTTCAAGCAGAAGTCGACGCTGCTCCAGCACGAGCGCATCCACACGGACTCGCGGCCGTACGGCTGCCCGGAGTGCGGCAAACGTTTCCGGCAGCAGTCGCACCTCACGCAGCACCTCCGCATCCACGCCAACGAGAAGCCGTACGCTTGCGTCTACTGCCCGCGCTCGTTCCGGCAGCGCGCCATCCTCAACCAGCACCTACGCATCCATTCCGGTGAGAAGCCATATACGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGGCGAGCGCTATTCACACATATATGCCCCTCCCCGGTccccgcgcgcgccgcccgcaCTGGCCCGAGCCGCTCGGGCCAGTGCCGGCGCCGCGAGCGCTCCCCGCCGCCCCCAGCACGTTCGACTCGGTCTCGCATCCATTGGCCTTCCTAACAAACAAATTCTCGGTCCCCTCGTCGCCCACCTCGAGGGCGCGCGCGAGACGCGGAACCGATCTCCGGACGCTCCCGTAACCGTCCCTAACGTTTCTCCGCATCTGATCTTCAAAAACGGGACCACGCCGACGTTGTGGCCCCAGGACGTTCCGTTCCCTCCGGACGAGGGCAAGGAGGAGGTGATGTCCACGTTTGGCGACGCGGACGGCCAGAACGGCGATCAGCGCGGGTCGTGTTTCTCCCCGGGCGACACGGCGCAGTATCCGGCTTATTTCAAAGACACGAAAGGGCTCAATCATACGGTGTTCGGCTCCGGGCTCTCGTTACAATACCTCAAGGGAGGTAAGCTGCCCGACGTGATCGGCGGTCGCGTGATGCCGCTGTACGTGCGCTGTCCGATCTGCCAGAAAGAGTTCAAGCAGAAGTCGACGCTGTTGCAGCACGGCTGCATACACATAGAGTCGCGGCCGTACCCCTGCCCCGAGTGCGGCAAACGGTTCCGGCAGCAGTCGCATCTCACGCAGCACCTCCGCATACACACGAACGAGAAGCCGTACGGCTGCGTGTACTGCCCGCGCTTCTTCCGGCAGCGGACCATCCTGAACCAGCACCTGCGCATCCACACCGGCGAGAAGCCGTACAAGTGCACGCAGTGCGGCAAGGACTTCCGGCAGAAGGCCATCCTCGACCAGCACACGCGCACGCACCAGGGCGACCGGCCGTTCTGCTGCCCCATGCCGAACTGCCGGCGGAGGTTCGCGACCGAGCCCGAGGTGAAGAAGCACGTGGACAACCACATGAACCCGCACGCGGCGAAGGCGCGGCGCGCGGACGCGAACAAGACGCCGCGGCCGCTGCCGCCGGCCACGGCGGTGGTGAAGCCGGAGCTGTACTTCCCGCAGTGCTACGCGCCGCCGTTCCAGCAGTTCCCGCCGAGCGGGGGCGAGTTCAAGCCGGCCGTGGGCCCGGGCGCGCCGCTGGCGTGCCTGCCGGCGCAGTga
Protein Sequence: MVESNIRNNAPSIIKNTTAPYVLYKDGVERAPPGTQWGGGVLDGGYQPMQHQSPGGPSPQPEPQLASPAPSPYPPAPPPPDQAAEDAAQQLAQQQAQQQVQQQQQQTSPDHMQVEQQLQNQSQTQPTQDHLDRGPCFIPQPDLQQQYTPYFKETRPASHMLGGGGFPLHYLKQNGGVLSLEGPLDQYGAPELRHLPDIVQPEPPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQGERYSHIYAPPRSPRAPPALARAARASAGAASAPRRPQHVRLGLASIGLPNKQILGPLVAHLEGARETRNRSPDAPVTVPNVSPHLIFKNGTTPTLWPQDVPFPPDEGKEEVMSTFGDADGQNGDQRGSCFSPGDTAQYPAYFKDTKGLNHTVFGSGLSLQYLKGGKLPDVIGGRVMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHVDNHMNPHAAKARRADANKTPRPLPPATAVVKPELYFPQCYAPPFQQFPPSGGEFKPAVGPGAPLACLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01078408;
90% Identity: iTF_00888518;
80% Identity: -