Epro010579.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eudemis profundana
Gene Symbol
-
Assembly
GCA_947034915.1
Location
CAMQQJ010000089.1:563119-569637[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 9.9 8e+02 2.1 0.5 1 21 127 149 127 150 0.86
2 14 0.41 33 6.4 0.3 9 23 165 179 157 179 0.84
3 14 0.0014 0.11 14.2 5.9 1 23 185 207 185 207 0.99
4 14 3.7e-06 0.0003 22.3 3.9 1 23 213 235 213 235 0.99
5 14 2.5e-05 0.0021 19.7 6.4 1 23 241 263 241 263 0.99
6 14 6.4e-05 0.0052 18.4 4.5 1 23 269 291 269 291 0.99
7 14 5.7e-06 0.00046 21.7 3.8 1 23 297 319 297 319 0.99
8 14 0.081 6.5 8.7 0.8 9 23 333 347 331 347 0.95
9 14 9.6e-06 0.00077 21.0 4.4 1 23 353 375 353 375 0.99
10 14 7.1e-05 0.0057 18.3 5.6 1 23 381 403 381 403 0.99
11 14 1.1e-05 0.0009 20.8 3.1 1 23 409 431 409 431 0.99
12 14 8.3e-06 0.00067 21.2 2.9 1 23 437 459 437 459 0.99
13 14 5.2e-05 0.0042 18.7 3.2 1 23 465 487 465 487 0.99
14 14 0.072 5.8 8.8 1.3 3 23 495 516 493 516 0.97

Sequence Information

Coding Sequence
ATGGAGGCAGTGTGTGTGAAGGAGGAGCCAGAATGGGAACCAGTGGTTGTGAAAGACGAGCCCGAGTGGGAGCCTGGCGCATGCGCGCgcggcgtgagcgaggcggccgcgcgggcAGGGCTCTATGTGGGTCATATCATCAAGGACGAGCTGGTGCTGGGCCCCGAGCTGCTGCAGCCCCGCGACGCGGTCTTTGCGCTGCGAGCATCACTGCCGACAGAGGACAGTCACCTCTCATCACTGAAGACAAAGGAGGCGCCGGGCAGGACTTGCTCTGTCATTCTGGAGCGCATGCCTCTGGATCTCGAGCAGCTAACATATAGGATTGGTGACAGATTAAATCATTTTCAATGGTATCTCCAAAACCAAGGAACCGACTTTAAATGCGATGTGAACACTTGCAACAGCAAGTTTGATACGAAACTGCTTCAACTGCAGCACGCGAGGAGAGAATATGGTGTGAAATATTTTACTTGCAAGGAATATCAGTATGCAACAAAATATGCACGAAACTTACAGGATCACTTAAGGACTCATACAGGTGAGAAGCCTTTCGAGTGCAATCAGTGCAGTTCcaaatttaaactaaaatgtAATTTACTTCGTCACCAGAGAACGCACACTGGCGAGAAGCCtttcaagtgcaatcagtgcagTTCCAAATTTAGCCAAAAATCTAATTTACTTAATCACCAGAGAACGCACACTGGCGAGAAGCCTTTCAAGTGCAACCAGTGCAGTTCCAAATTTAGCCATAAATCATCTTTACTTCGTCACCAGAGAACACACAGTGGCGAGAAGCCTTTCGAGTGCAATCAGTGCAGTTCCAAATTTAACCAAAAATCTCATTTACTTGATCACCAGAGAACACACGGTGGCGAGAAGCCTTTCAAGTGCAACCAGTGCAGTTCCAAATTTAGCCAAAAATCTTCTTTACGTATTCACCAGAGAACACACAGTGGCGAGAAGCCTGTCAAGTGCAACCAGTGGAGTTCCAAATTTAGCCAAATATCTAATCTACTTACTCACCAGAGAACACACAGTGGTGAGAAGCCTTTTAAGTGCAATCAGTGCAGTTCCAAATTTAACCGAAAATCTAATTTACTTACTCACCAGAGAACACACAGTGGTGAGAAGCCTTTCAAGTGCAACCAGTGCAGTTCCAAATTTAACCAAAAATCTCATTTACTTGATCACCAGAGAACACACAGTGGCGAGAAGCCTTTCAAGTGCAACCAGTGCAGTTCCAAATTTAGCCAAAAATCTTCTTTACTTATTCACCAGAGAACGCACACTGGCGAGAAGCCTTTCGAGTGCAATCAGTGCAGTTCCAAATTTAGCCAAACATCTAATTTACTTCGTCACCAGAGAACACACAGTGGCGAGAAGCCTTTCAAGTGCAACCAGTGCAGTTCCAAATTTAGCCAAAAATCATCGTTACTTACTCACCAGAAAATACACACTGGCGAGAAGCCTTTCGGGTGCAACATCTGTGACTACAAGGCTACTTGGTCAAGTTCCCTGAAGCATCATGTAATGACACGTCACTAG
Protein Sequence
MEAVCVKEEPEWEPVVVKDEPEWEPGACARGVSEAAARAGLYVGHIIKDELVLGPELLQPRDAVFALRASLPTEDSHLSSLKTKEAPGRTCSVILERMPLDLEQLTYRIGDRLNHFQWYLQNQGTDFKCDVNTCNSKFDTKLLQLQHARREYGVKYFTCKEYQYATKYARNLQDHLRTHTGEKPFECNQCSSKFKLKCNLLRHQRTHTGEKPFKCNQCSSKFSQKSNLLNHQRTHTGEKPFKCNQCSSKFSHKSSLLRHQRTHSGEKPFECNQCSSKFNQKSHLLDHQRTHGGEKPFKCNQCSSKFSQKSSLRIHQRTHSGEKPVKCNQWSSKFSQISNLLTHQRTHSGEKPFKCNQCSSKFNRKSNLLTHQRTHSGEKPFKCNQCSSKFNQKSHLLDHQRTHSGEKPFKCNQCSSKFSQKSSLLIHQRTHTGEKPFECNQCSSKFSQTSNLLRHQRTHSGEKPFKCNQCSSKFSQKSSLLTHQKIHTGEKPFGCNICDYKATWSSSLKHHVMTRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00680818;
90% Identity
-
80% Identity
-