Basic Information

Insect: Eudemis profundana
Gene Symbol: -
Assembly: GCA_947034915.1
Location: CAMQQJ010000794.1:129658-141734[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 7.3e-06 0.00059 21.4 2.3 1 23 172 194 172 194 0.97

2 12 0.0059 0.48 12.2 3.3 1 23 223 245 223 245 0.97

3 12 0.0009 0.073 14.8 0.1 1 23 251 273 251 273 0.96

4 12 2.3e-06 0.00018 23.0 0.6 2 23 280 301 279 301 0.97

5 12 0.00017 0.014 17.1 3.8 1 23 307 329 307 329 0.98

6 12 4.3e-06 0.00035 22.1 0.8 1 23 335 357 335 357 0.98

7 12 0.00016 0.013 17.1 0.8 1 23 363 385 363 385 0.96

8 12 2.2e-06 0.00018 23.0 0.3 1 23 393 415 393 415 0.97

9 12 0.0032 0.26 13.1 0.6 2 23 421 442 420 442 0.97

10 12 0.00045 0.036 15.8 5.7 1 23 448 470 448 470 0.96

11 12 1.6e-06 0.00013 23.4 0.4 1 23 476 498 476 498 0.97

12 12 1.4e-05 0.0012 20.5 4.4 1 23 504 527 504 527 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	7.3e-06	0.00059	21.4	2.3	1	23	172	194	172	194	0.97
2	12	0.0059	0.48	12.2	3.3	1	23	223	245	223	245	0.97
3	12	0.0009	0.073	14.8	0.1	1	23	251	273	251	273	0.96
4	12	2.3e-06	0.00018	23.0	0.6	2	23	280	301	279	301	0.97
5	12	0.00017	0.014	17.1	3.8	1	23	307	329	307	329	0.98
6	12	4.3e-06	0.00035	22.1	0.8	1	23	335	357	335	357	0.98
7	12	0.00016	0.013	17.1	0.8	1	23	363	385	363	385	0.96
8	12	2.2e-06	0.00018	23.0	0.3	1	23	393	415	393	415	0.97
9	12	0.0032	0.26	13.1	0.6	2	23	421	442	420	442	0.97
10	12	0.00045	0.036	15.8	5.7	1	23	448	470	448	470	0.96
11	12	1.6e-06	0.00013	23.4	0.4	1	23	476	498	476	498	0.97
12	12	1.4e-05	0.0012	20.5	4.4	1	23	504	527	504	527	0.97

Sequence Information

Coding Sequence: ATGGAGTGCAGCGGCTGTATTAGCGCAGCGCTAGACCCGACGCGCGTAAAGAAGGAGCCTGGATGCGAATTTAATGCAGTGTCCATTAAGGAGGAAGGAGAGTATGCAAAGGACCCGGAATGGGAGAACATTGCGGATATGTGTGGGCTCAGTTTGCCAGTGACGCGAGCCGGGCCGTATGTTGACCATGTGGTGAAGAACGAGCACCCGCAGCCGCGAGACGTAGTCTTGTCGCTTCATGGCCAGCCGTCAGGCTCCGCGGCGCGCTGCGCGCTGAAGGAATGCTCAGTGCGGCTTGAACGTATCGACGACAAGTGCCAAATAGTCAATCAGGATATGAGCGACTACGGAGATACAGTCTTGTACAGCGACCTACGGCTCTGGCAGTGCTCCGTCCGGCTCGTGCGTTGTCTCATCCCTCGCGGGGGCGCCACTCGCGCGGGGGATCCACACAACGACAGCCACAGAGGAGAGAAAACCGATTCACAACTCAACTctcaagatactaaaaactataTATGTAACACTTGTGGCCGGTCATACCGACACAGGAACGACTTAATTAAACACATTCAACAGCACGAGCTGTACTACAGTCTACAGTCAAAAAAGCTGCCAAGGAAATCAAAGCTCATCATCCAAGCCATGCTGTCGGAAAGTAAAGAATATTTTTGTGATAAATGTGACAGACGCTTTGGAAGTTATTCCGGTTTCCGCTACCACAAGAAGCTACACTCGGGGAAAAAGCCCTTTGCATGCGACATTTGTGGTAAGCGATTCATAATGCTGAGCGATGTCAGCATGCACAGGATCGTTCACACAGGGGAGAGGCCTCTGTCATGTGAGGTATGTAAAAAAACGTTTGCGCGCTTGAGCTCACTGGCGATACATAGACGAACGCACTCCGGCCTGAAGCCCTACGAATGCCGAATATGTAAAATGAAGTTCAGGCAGACGGGCCATTTAAAGAATCATGAACAAACTCACGCCAAGCAAAAGGCGTTCTCTTGTGAAATATGCTCCAAACGATTTGCGCAATTGAGCTACTTAAACGTACATAAACGCGTTCACACTGGAGAGAAGCCGTATTCGTGCGGTGTATGCAATAAACAATTTAGACAATCTAACGCTTTAAAGTATCATGAGCAAGGACATATGGCTGTCatagaaaaaccttatgctTGCGACATATGTGAAAAACAGTTTAGGGATGCaggcaatttaaaaaaacataaacaaatacaCATAGGAAAAAAGGTAACCTGCGAGATATGTAACAAACAATTAGCACATATGCAGAGCTTGGAGATTCATAGACGAATTCACACAAAAGATAAACCTCACGCCTGCGACATTTGCCACAAGAAGTTCAGGGAGTCGCGTTATTTAAAATCGCATAAAAGAGTCCACACGGGGGAGAAACCTTATTCCTGCGATGAATGCGAGAAACGGTTTTCGCAGCCGAGTGCGTTAAAGAGCCATAAACTGATACACTCGGGTGGTAAACCTTTTTCTTGTGATGTTTGTCAAAAGAAATTCAGACAATCGTGCAACTTAAAGAAACATGAAAGAAGTGCACACGGAAATAAGGCCTTATCTGTGCGAAAAGTGTAA
Protein Sequence: MECSGCISAALDPTRVKKEPGCEFNAVSIKEEGEYAKDPEWENIADMCGLSLPVTRAGPYVDHVVKNEHPQPRDVVLSLHGQPSGSAARCALKECSVRLERIDDKCQIVNQDMSDYGDTVLYSDLRLWQCSVRLVRCLIPRGGATRAGDPHNDSHRGEKTDSQLNSQDTKNYICNTCGRSYRHRNDLIKHIQQHELYYSLQSKKLPRKSKLIIQAMLSESKEYFCDKCDRRFGSYSGFRYHKKLHSGKKPFACDICGKRFIMLSDVSMHRIVHTGERPLSCEVCKKTFARLSSLAIHRRTHSGLKPYECRICKMKFRQTGHLKNHEQTHAKQKAFSCEICSKRFAQLSYLNVHKRVHTGEKPYSCGVCNKQFRQSNALKYHEQGHMAVIEKPYACDICEKQFRDAGNLKKHKQIHIGKKVTCEICNKQLAHMQSLEIHRRIHTKDKPHACDICHKKFRESRYLKSHKRVHTGEKPYSCDECEKRFSQPSALKSHKLIHSGGKPFSCDVCQKKFRQSCNLKKHERSAHGNKALSVRKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -