Epro031862.1
Basic Information
- Insect
- Eudemis profundana
- Gene Symbol
- Znf711
- Assembly
- GCA_947034915.1
- Location
- CAMQQJ010000361.1:610117-613593[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.69 55 5.7 0.5 1 23 157 179 157 179 0.91 2 19 6.4 5.2e+02 2.7 0.0 6 23 191 209 191 209 0.92 3 19 2e-07 1.6e-05 26.3 0.1 3 23 266 286 265 286 0.97 4 19 0.0045 0.36 12.6 0.0 3 23 295 316 293 316 0.94 5 19 0.15 12 7.8 0.1 1 19 322 340 322 344 0.92 6 19 0.099 7.9 8.4 0.6 2 23 351 374 350 374 0.91 7 19 0.00076 0.061 15.0 0.8 6 23 384 402 383 402 0.98 8 19 0.22 17 7.3 1.3 1 23 568 590 568 590 0.92 9 19 0.00046 0.037 15.7 1.3 2 23 597 619 596 619 0.92 10 19 7.1e-05 0.0057 18.3 0.8 3 23 627 647 625 647 0.96 11 19 7.9e-06 0.00064 21.3 1.7 1 23 653 675 653 675 0.98 12 19 0.0046 0.37 12.6 1.1 1 23 681 703 681 703 0.97 13 19 0.0025 0.2 13.4 0.1 1 23 709 731 709 731 0.93 14 19 0.031 2.5 10.0 5.5 1 23 737 760 737 760 0.96 15 19 4.1e-05 0.0033 19.0 0.0 3 23 840 861 839 861 0.95 16 19 0.0009 0.072 14.8 1.3 3 23 869 889 869 889 0.98 17 19 0.0049 0.4 12.5 0.0 1 23 895 917 895 917 0.97 18 19 3.3e-06 0.00027 22.5 0.3 1 23 922 944 922 944 0.96 19 19 0.00021 0.017 16.8 1.4 6 23 954 971 951 971 0.97
Sequence Information
- Coding Sequence
- ATGCTGCCGCTGGTGGTGTGCTACCAGTGCACGGGCACGCTGCTGGCCACGCACGAGCTGGCGCAGTGCAGCCTGCAGGCCGACGCGGCGCTGCGCACCCGCGCCGCGCAGCGCTTCCGCACCATGCAGGAACGGCAGGAGGAGCTACGAGCGGCGGCGAGGCGGGAGCAACAAAAAGCCCGACAGAACGCTGGCAAGCCGGCGGATGTAGGGTTTACCGCGACCGTCGCTCGCGTGCTCGTCGACTACTTCCACACGCTCGACATGGACGAGGGCGACGAGTGCCAGTTCGCGTGCCAGCCGTGCGCCTGGCGCGGCCACTCCGTGCCGGCGCTCGCCGCGCACCTGCGCGCGCACGGCGCCCGGgggcccgccgccgccgcgcgcctcATCCGAGAACACGTCACCTTCGAGCAGGCGCTCGACGAGCCCGCGCCGagcccgccgccgcccgccgtGCCGCCCGCGCACCGCTGCCCCTTCTGCGAGAGCGCGTTCTCCTCCACCGCGCGCCTCGCGCTGCACTTCGCCGAGCACGTCGACATCGGCGCCGACAACGCCGTCGAGTGCTGCGGCGGCGTGTTCGCCGACCGCGCGCTGTTCGTGCGGCACGCGCAGGCGGCCCacggccgcgcgccgccgccgcgcctcgCCTGCCGCGCCTGCGGCCACCTCGCCGACACGCCCGCCGCGCTGCGGGAGCACGTGCGCGCCGCCCACGCCGACGCCGCCGCGgagcgccgccgccgcaccgccgccgcgcccgccgggGACCAGAAGTATGTCCCGGCGCCGTGCCCGGACTGCGGCAAGACTTTCTCCAACAAGTACAACATGGCGGCCCACGCGCGCACCCATCGGAACGCTCCGCAGAGACTCGCCTGCGACCGCTGCCCGCGGTTCTACTCGAGTCGCGGCGCGCTCACGGCGCACGCGAGGGCCGCGCACGCGGGCCTCCTCCGCTTCGCGTGCGAGGCGTGCGGCGAGCGCTTCCCGACGCGCTCGGCCCGCGCGCGGCACGAGCCGGTCCACACCGGGGAGCGCCCGCACGCCTGCACGGTGGACGGCTGCCGGAGCGCATTCCGGACTCGCAACTCGCTGCTGCGGCACCTGGACGCGCACCGCGACGTGCGTCCGTACGCGTGCGCGTGCGGCAAGGCCTTCCGCCGGACCTCCCATCTCGCCTACCACGTCAGAACGCAACACGGCCCGCCCCGCACCGCCGCGGTGCCCGACGAACGAGAGAACGCGATTCTGAAGGTGCCTCCCCCGGAAATATCGTTGGTACCTCCAGTAACGACGACCGTTTGTTGCAGGTCGAAGCCTCGCAACGAAGACGATTCGGAAAATTACCGGTGGACGAGTACCGATGACGAGGGCGACGATCGCGGGGCGGCCGCGAGCTCCAGCGAGGACGACGACCGCCCGCTGGCGACCCTGGCCTCCGAGAAAGCCTCCGGCGACCTATACGGCGAATTCTACGCGGCCCTGCTGAACTTTAGAAATCATCTCATGAACGAACACGAGACGACCACCGGCTACCCCGAGTTCACGGAATCGAGCGACGGCGAGTCGTCGGACGGGTCGGCCGCGGACGACTACGACGACCTCTCGAGGAACAACATGAGGAAGGACCGCATGGACGAGGCGCTGCGGCTCGAGCTCGCGCAGGTGCTCACGAGGATTGACGGCAAGCCGTACTACACGTGCCGAGTGTGCGGCAAGAACCTGAGCTCGCCGCACACGTACGTGTTCCACGGGCGCATCCACACGGGCGAGCGGCCGTGCGTGTGCCACGTGTGCGGCAAGCAGTTCCGCGCGCCCAACGGCCTGCAGCGGCACCTCGCCGAGACGCAcgagcgccgccgccggctcGCCTGCCGCCTCTGCGCGCGCACCTTCGCCAACTCGCAGAACCTGAAGCAGCACCTGCGCACGCACACGGGCGAGCGGCCGTACTCGTGCGCGACCTGCGGCAAGCGGTTCGCGCAGTCCGGCTCGCTGCACGCGCACCGCAAGACGCACAGCGCCGCGCTGCCGCACCGCTGCGCGCACTGCCCGGCCGCCTTCCGCCTGCGTGCCGGGCTCGCGCGCCACCGCCTGCGCCACTCCGGCGAGCGCCCGCACGCCTGCCCGCTGTGCGCGCGCGCCTTCCGCACCCGCGCCGACCTCGCCTCGCACCGCGCCGCGCACGAGGCGCTGCGCCCGCACCGCTGCGGCGCGTGCCACGCCACGTTCCGCTCGCGCCGCGCGCTCCGCCACCACGCGCGCCGCCTGCACGAGGCGCCCGCGCCCCCtccagcgccgccgccgccgatgccGCACGTCACCCTCCAGCCGACCGACCACCCCCTAATTTCGAAATTCTCCCGTGAAACGTCTGAACGTCTCCCCCTCGATCCTTCCAGAGCGCCAGACCCGGAGATCCGACCCGAGAATCGAATCGAGACCGAAACGGCGAGCGTCTCGCCCGGGGCGCTCGGCGGCGGACGCCCcccggcgcggcgccggcggccgTGCCCGTCGTGCGGGCTGTCGTTCTCGGACGCGGGCAACCTGGCGCGGCACTGGCGCGCGGCGCACGGCGGGCGGCGGCCGCACGGCTGCGCGCGCTGCCCGGCGACGTTCGCGCGGCGCGACCACCTGCGCGACCACGAGCGCACGCACTCGGCGACGCGCGAGTTCGTGTGCGCCGAGTGCGGCGCGGCGTCGCGCTCGGCCGCGGCGCTGCGCATGCACCGGCGCGCGCACGGCCCGCCCCGGCACCCGTGCGTGGAGTGCGGCAAGAGCTTCCGGCGCCGcgccgagctgcaagcgcacTGGAGCGTGCACACGGGCGAGCGCGCGCACGAGTGCCGCTGCGGGAAGGCGTTccggctgcgcgcgcagctCACCCGCCACCAGCGCACGCACCGCACGGACGCGGGACCGGCGGCCGACCTATAG
- Protein Sequence
- MLPLVVCYQCTGTLLATHELAQCSLQADAALRTRAAQRFRTMQERQEELRAAARREQQKARQNAGKPADVGFTATVARVLVDYFHTLDMDEGDECQFACQPCAWRGHSVPALAAHLRAHGARGPAAAARLIREHVTFEQALDEPAPSPPPPAVPPAHRCPFCESAFSSTARLALHFAEHVDIGADNAVECCGGVFADRALFVRHAQAAHGRAPPPRLACRACGHLADTPAALREHVRAAHADAAAERRRRTAAAPAGDQKYVPAPCPDCGKTFSNKYNMAAHARTHRNAPQRLACDRCPRFYSSRGALTAHARAAHAGLLRFACEACGERFPTRSARARHEPVHTGERPHACTVDGCRSAFRTRNSLLRHLDAHRDVRPYACACGKAFRRTSHLAYHVRTQHGPPRTAAVPDERENAILKVPPPEISLVPPVTTTVCCRSKPRNEDDSENYRWTSTDDEGDDRGAAASSSEDDDRPLATLASEKASGDLYGEFYAALLNFRNHLMNEHETTTGYPEFTESSDGESSDGSAADDYDDLSRNNMRKDRMDEALRLELAQVLTRIDGKPYYTCRVCGKNLSSPHTYVFHGRIHTGERPCVCHVCGKQFRAPNGLQRHLAETHERRRRLACRLCARTFANSQNLKQHLRTHTGERPYSCATCGKRFAQSGSLHAHRKTHSAALPHRCAHCPAAFRLRAGLARHRLRHSGERPHACPLCARAFRTRADLASHRAAHEALRPHRCGACHATFRSRRALRHHARRLHEAPAPPPAPPPPMPHVTLQPTDHPLISKFSRETSERLPLDPSRAPDPEIRPENRIETETASVSPGALGGGRPPARRRRPCPSCGLSFSDAGNLARHWRAAHGGRRPHGCARCPATFARRDHLRDHERTHSATREFVCAECGAASRSAAALRMHRRAHGPPRHPCVECGKSFRRRAELQAHWSVHTGERAHECRCGKAFRLRAQLTRHQRTHRTDAGPAADL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -