Basic Information

Insect: Eudemis profundana
Gene Symbol: -
Assembly: GCA_947034915.1
Location: CAMQQJ010000509.1:116151-124688[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.1e-05 0.0017 19.9 4.7 1 23 149 171 149 171 0.98

2 15 8.7e-07 7e-05 24.3 0.4 1 23 177 199 177 199 0.98

3 15 3.8e-05 0.003 19.1 2.4 1 23 205 227 205 227 0.96

4 15 1.6e-06 0.00013 23.4 0.8 1 23 233 255 233 255 0.98

5 15 0.00091 0.074 14.8 3.8 1 23 261 283 261 283 0.97

6 15 0.00018 0.014 17.0 3.9 1 23 289 311 289 311 0.98

7 15 4.8e-07 3.9e-05 25.1 1.7 1 23 317 339 317 339 0.98

8 15 2.9e-05 0.0023 19.5 2.0 1 23 345 367 345 367 0.98

9 15 4.3e-05 0.0035 19.0 1.1 1 23 389 411 389 411 0.98

10 15 2.6e-06 0.00021 22.8 0.9 1 23 417 439 417 439 0.96

11 15 7e-07 5.6e-05 24.6 2.4 1 23 445 467 445 467 0.98

12 15 8e-06 0.00064 21.3 0.9 1 23 473 495 473 495 0.98

13 15 1.3e-05 0.001 20.6 1.1 1 23 501 523 501 523 0.98

14 15 3.9e-05 0.0032 19.1 2.3 1 23 529 551 529 551 0.98

15 15 2.2e-07 1.7e-05 26.2 0.5 1 23 557 579 557 579 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.1e-05	0.0017	19.9	4.7	1	23	149	171	149	171	0.98
2	15	8.7e-07	7e-05	24.3	0.4	1	23	177	199	177	199	0.98
3	15	3.8e-05	0.003	19.1	2.4	1	23	205	227	205	227	0.96
4	15	1.6e-06	0.00013	23.4	0.8	1	23	233	255	233	255	0.98
5	15	0.00091	0.074	14.8	3.8	1	23	261	283	261	283	0.97
6	15	0.00018	0.014	17.0	3.9	1	23	289	311	289	311	0.98
7	15	4.8e-07	3.9e-05	25.1	1.7	1	23	317	339	317	339	0.98
8	15	2.9e-05	0.0023	19.5	2.0	1	23	345	367	345	367	0.98
9	15	4.3e-05	0.0035	19.0	1.1	1	23	389	411	389	411	0.98
10	15	2.6e-06	0.00021	22.8	0.9	1	23	417	439	417	439	0.96
11	15	7e-07	5.6e-05	24.6	2.4	1	23	445	467	445	467	0.98
12	15	8e-06	0.00064	21.3	0.9	1	23	473	495	473	495	0.98
13	15	1.3e-05	0.001	20.6	1.1	1	23	501	523	501	523	0.98
14	15	3.9e-05	0.0032	19.1	2.3	1	23	529	551	529	551	0.98
15	15	2.2e-07	1.7e-05	26.2	0.5	1	23	557	579	557	579	0.98

Sequence Information

Coding Sequence: ATGGAGGCGATGCAATCATGTCGTTGTTGCTTGCTGCGGCCACCCGACAAGGGTTTGAAGACGCTGTACACCCATCTGGGCAAAACCGAGATATATTCGGACATGCTCAAGGAATGTTTCGATATACAACTTGTTCTTGGCAATGACGAGTGTGGGATCTGCGAGGTGTGTGTATGCCGGTTACGTAACGCAAGCGACTTCAAGCAACAAGTGCAGCGCAGCCAAGCAGAATTGCAGGCTACCCTGGATGGGGCACAAAATGTCAAAgAAGACAAATCAGATGTGAAGTTGGAGATGTCTTTAGCAGATGTCACGAATGCTGAGACAGTACAACACGAAGAGCCCTCGGTGAAGTTGGAGGTTTCCGACGACGATGCAGATTTAATATCGTTGGCATTGTATGGCAAAACCGGCGCTCCCTCGGGCGGCCGCGACGCCGGCCCCCACACTTGCGACACCTGCGAGAAGACCTTCGACCGACACTCCAGCCTGCGCGCCCATACCCGCGtccacacaggagagaaaccttACTCATGCGACATATGCCAAAAGGAATTCGCCCAAAAAGGCAACTTGAACGCCCACCTCAAATACCACACGGGAGACTATCGATACTCCTGCGATGTGTGCAATATGCAATTCACTCAAAAATCACACCTAACCAATCACAAGGTGATTCACACGGGAGAAAAACCGTACACGTGCGAAATATGCAAGAGACAGTTCGCGCAGAAAGGCAACTTGAACGCGCATTTAAAATATCACACGGGGGACTATAGGTTTTCCTGTGATGTCTGTCACAGGAAATTCACGCAAAAATCTCGCTTGGACACTCATAAGCTCGTTCATACTGGTGAAAAACCGTACAGCTGCGACGTATGCAATAAGCAGTATACACAGAAATGCACGTTAAATGCTCATTTGAAATATCACACTGGAGATTATCGGTTTACTTGCGATGTCTGTAATAAACGGTTCACACAAAAAGCTTACCTGATAAAACATACGAGAGTTCACAcaggcgagaaaccttacactTGTGACGTATGCAACAAGGGGTTCGCGCAGGAGTGTAACTTAAAAACACACTTAAAAGATCATATAAATAAATCTGACATTAATGCTCACCCACTCATAGAAGAAGCGAACATATCATCTGAAACATATTCATGTGAAACATGTAAAAAGGAATTCAGACTAAAATCCACCCTAGACCGCCATATTCTAATTCACACGGGAGATAAAGTATTCAGTTGTGAAATATGCGGAAAGCAATTTCAACGCAAGAGCGGGTTATCCCGACACATGTACGGGCACATGGGGCTAAAACCGTTTTCCTGCGAAATTTGCAACCGACGATTTACACTGAAAAGCAACTTGAAAGCTCACAAGCGAACGCATACTGAAGAGAAATCGTATTCATGTGAAGTGTGTCAGAAGCTATTTagaactaaaactaatttaaaaggTCATATGTTGGTGCATTCTGGTTTAAAACTTTACTCTTGTGAGATTTGCAGTAAGGAATTCGCTCATAAATCTGCGTTAACCGTCCACAGCAGACTTCACACAGGATTAAAACCGCATTCATGTGAGATATGTAAAAAGGAGTTTAGAGTGCTCTCTGGGCTGAAGCTGCATTACAGGACGCACACGGGAGAGAAACCGTACGTTTGCGATATGTGCAGCAAGTCGTTCGCTGACCCGTCGTCTCTGAGGAAGCATAAACGCATACACGCTAAAGAGAAACCGTATCCTTGGTga
Protein Sequence: MEAMQSCRCCLLRPPDKGLKTLYTHLGKTEIYSDMLKECFDIQLVLGNDECGICEVCVCRLRNASDFKQQVQRSQAELQATLDGAQNVKEDKSDVKLEMSLADVTNAETVQHEEPSVKLEVSDDDADLISLALYGKTGAPSGGRDAGPHTCDTCEKTFDRHSSLRAHTRVHTGEKPYSCDICQKEFAQKGNLNAHLKYHTGDYRYSCDVCNMQFTQKSHLTNHKVIHTGEKPYTCEICKRQFAQKGNLNAHLKYHTGDYRFSCDVCHRKFTQKSRLDTHKLVHTGEKPYSCDVCNKQYTQKCTLNAHLKYHTGDYRFTCDVCNKRFTQKAYLIKHTRVHTGEKPYTCDVCNKGFAQECNLKTHLKDHINKSDINAHPLIEEANISSETYSCETCKKEFRLKSTLDRHILIHTGDKVFSCEICGKQFQRKSGLSRHMYGHMGLKPFSCEICNRRFTLKSNLKAHKRTHTEEKSYSCEVCQKLFRTKTNLKGHMLVHSGLKLYSCEICSKEFAHKSALTVHSRLHTGLKPHSCEICKKEFRVLSGLKLHYRTHTGEKPYVCDMCSKSFADPSSLRKHKRIHAKEKPYPW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -