Epro019643.1
Basic Information
- Insect
- Eudemis profundana
- Gene Symbol
- -
- Assembly
- GCA_947034915.1
- Location
- CAMQQJ010000174.1:467143-493399[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.0015 0.12 14.1 5.8 2 23 65 86 64 86 0.95 2 29 1.8e-07 1.4e-05 26.5 0.8 1 23 92 114 92 114 0.98 3 29 7.1e-07 5.7e-05 24.6 0.6 1 23 120 142 120 142 0.98 4 29 0.00048 0.039 15.7 0.1 1 23 148 172 148 172 0.98 5 29 0.011 0.9 11.4 2.4 1 23 182 205 182 205 0.96 6 29 0.00015 0.012 17.3 0.9 1 23 220 242 220 242 0.95 7 29 0.00015 0.012 17.3 0.9 1 23 328 350 328 350 0.95 8 29 0.00015 0.012 17.3 0.9 1 23 408 430 408 430 0.95 9 29 0.00015 0.012 17.3 0.9 1 23 488 510 488 510 0.95 10 29 0.00015 0.012 17.3 0.9 1 23 568 590 568 590 0.95 11 29 0.00015 0.012 17.3 0.9 1 23 648 670 648 670 0.95 12 29 0.00015 0.012 17.3 0.9 1 23 728 750 728 750 0.95 13 29 0.00015 0.012 17.3 0.9 1 23 808 830 808 830 0.95 14 29 0.00015 0.012 17.3 0.9 1 23 888 910 888 910 0.95 15 29 0.00015 0.012 17.3 0.9 1 23 968 990 968 990 0.95 16 29 0.00015 0.012 17.3 0.9 1 23 1048 1070 1048 1070 0.95 17 29 0.00015 0.012 17.3 0.9 1 23 1128 1150 1128 1150 0.95 18 29 0.00015 0.012 17.3 0.9 1 23 1208 1230 1208 1230 0.95 19 29 0.00015 0.012 17.3 0.9 1 23 1288 1310 1288 1310 0.95 20 29 0.00015 0.012 17.3 0.9 1 23 1368 1390 1368 1390 0.95 21 29 0.00015 0.012 17.3 0.9 1 23 1448 1470 1448 1470 0.95 22 29 0.00015 0.012 17.3 0.9 1 23 1528 1550 1528 1550 0.95 23 29 0.00015 0.012 17.3 0.9 1 23 1608 1630 1608 1630 0.95 24 29 0.00015 0.012 17.3 0.9 1 23 1688 1710 1688 1710 0.95 25 29 0.00015 0.012 17.3 0.9 1 23 1768 1790 1768 1790 0.95 26 29 0.00015 0.012 17.3 0.9 1 23 1848 1870 1848 1870 0.95 27 29 0.00015 0.012 17.3 0.9 1 23 1928 1950 1928 1950 0.95 28 29 0.00015 0.012 17.3 0.9 1 23 2008 2030 2008 2030 0.95 29 29 0.00015 0.012 17.3 0.9 1 23 2088 2110 2088 2110 0.95
Sequence Information
- Coding Sequence
- ATGGACAAGTGTGGAATATGCATGAAGCCCGCTGTGCAATTGTTTGAAACGGGCAAGGATGGTGTGTACGCATGCTTCAAGTGTCAGCCGCTGGTCCCAGAGATCACCATCGAAGATCACACTGAGCCGGAGGAGGCTTCAGACCCACTTGAGGTCTCTGAGGAGAGCCTCACTGAGAATGACATCTCACTGTGCTGTGGCATTTGCCACAAGACGTTTCAGAAGAACATGCAGCTCCAGAACCACATGCGCAATCACCGCGCCGAGCGGAGGTTCGTCTGCACCTACTGCAACAAAGCATTTTCCCAATCCAACAACCTGCGCGCGCATCTCCGCATCCACACCAACGAGCGACCTTACAAGTGCAACGAGTGTGGGAAAGCCTTTACCCAGGTGACCAACCTGAACAACCATGTGCGTCTGCATACTGGAGAGCGGCCCTTCGTGTGCCCCGAGCCCGGCTGCAACAAGGCCTATGCACAGGTGACGAATCTGAACCAGCACCGCAAGCGGCACCTCGGCGGGCGCTGGGTGGAGAGCACCTACGACTGTACCATCTGCGGCCAGCAGTTCCAGCAGCGGAACCATATGTACACGCACAGACGCGAAGCGCACTACGGCGCGCGCAgcccggcgcgggcggcgcgggcgccgccgcaCCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACGTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATATCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATATCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCGGTATCTCACTTGTTACGTCATCAGACGCGAAGCCCACTACGCCGCACCAGTGCAAGCTGTGCGACAAGCGCTTCAGCACCGAGCGGCAGCTCGTCGCGCACGTCGCCGAGCACGTCGCCACCTCCGACCAGGACGCCGCCACGGACGAGGATGACGGTCAGGGCACGTTCTCGTGCGTGTTCTCGTCGTGCGGGGCGCGGCTGTCGTCGCCGCGCGCGCACACGGAGCACCTGCTGCGCGCGCACCAGCTGCGCGTgcacgccgcgcgcgcgccgccgccgccccagCAGCCGCCGCGCCGCGGCCGCCCGCCCAAGGTTATCAAAGTCGAGTCGATGGTTGACATTAAAGATTCAATATTTAATGACGTGAAAATCATAAAGGAGGAATCTCAATTACTGCCCAAATTAAAAGTGCAGAGTTTGTTCCAGTGA
- Protein Sequence
- MDKCGICMKPAVQLFETGKDGVYACFKCQPLVPEITIEDHTEPEEASDPLEVSEESLTENDISLCCGICHKTFQKNMQLQNHMRNHRAERRFVCTYCNKAFSQSNNLRAHLRIHTNERPYKCNECGKAFTQVTNLNNHVRLHTGERPFVCPEPGCNKAYAQVTNLNQHRKRHLGGRWVESTYDCTICGQQFQQRNHMYTHRREAHYGARSPARAARAPPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDGRTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDAPSGSSSRTSPSTSPPPTRTPPRTRMTVGISLVTSSDAKPTTPHQCKLCDKRFSTERQLVAHVAEHVATSDQDAATDEDDGQGTFSCVFSSCGARLSSPRAHTEHLLRAHQLRVHAARAPPPPQQPPRRGRPPKVIKVESMVDIKDSIFNDVKIIKEESQLLPKLKVQSLFQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -