Basic Information

Gene Symbol
-
Assembly
GCA_947034915.1
Location
CAMQQJ010000142.1:1075791-1078259[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 3.5 6e+03 -1.3 0.0 22 33 233 244 230 254 0.84
2 5 2.9e-10 5e-07 31.0 0.1 1 45 264 310 264 311 0.94
3 5 5.5e-09 9.4e-06 26.9 0.4 2 44 318 364 317 366 0.94
4 5 1.1e-09 1.8e-06 29.2 0.0 1 43 370 412 370 414 0.97
5 5 7.5e-09 1.3e-05 26.5 0.0 4 44 423 465 422 466 0.97

Sequence Information

Coding Sequence
ATGGATGTAGATAGTGACGAAGAAAAGCAGCTCAACGATATAGCGCAAATAAATGCTGCTTTAGAACAAGAAGAGGAAGAGGCCTCATCTCTATTCCTGGACGCTTCAGTAAGTGACAGCGTAATCTCACGGCTCTCTCGATCCATACCCAGCAGTTTAGCCGACGAGACCGCACAAGAACATCTAAGAATCGATTCGGCTTTGGGCCTTAACAAACTACtagacgagaaattacgaaggCTTGAAAAAGTACTCGTCGACCGCTTACACGAGTGCCGACAGAAGTTACGTGACCTTCAAGCAGCAGTAACGCCAGGGGAGAGACAAGATCGTCATGAAACATTCCGATACATAAATTGTGGTAAGCCATATTTCAAGGATAAATCTAATTTTCCAGCCCCTGACAATGAAGACACAATACTTATGACAAAGAGTAACATGTATGATTTTTCCGAAATCACATCGGTTCCTGGTTGGACAGTAAAAGACAAGATCAGTGTGACCAACCTTCTTCGGAAAATGTCAATTGAGATTAAGAAGAAAGAGTTCCTTTCAAAGATTGCACAGTTAAAACGCGAAAGTAAGAATACAGATTCAAAgactttagaaaaaaaaattgatgccATCAACAGACAAATCACTGGTTTAGATAAAAAGAAATTGGAGGATATAGCCTTACCTATAGATCAAGAGTATGATTGGGAGATTGTGGCCAACAAACTAAACCGAAGGCACAGTGCTGCGGAGTACAGATCTCTCTGGAAAGTATTTCTACATCCTAGCGTAAGTAAAACCTCCTGGAGTCAAGATGAGCATGCCCGCTTGCATGAAATAGCACTAAACCACGACCTGCAAGACTGGGATGCCATTGCCAAAGAACTCAACACCGGCAGGACAGGGTACCAATGCTTTGTATACTTCAGGACTAATATGAGCAATACATTCACTGGGAAGAAGTGGTCAAAGGAGGAGGAGGAATATCTTCGGAGATTAATTGAATATTATAAAGAAGATGAGTATATACCATGGGGCAAGGTAGCTTCATCTATGGAGAACAGAACCAAGATTCAGATTTATAACAAGTATTTTAGGCTAGTTGAAAAGAGAAAAGGCAGATTTCTACCAGAAGAGGACGCGGTGATTTTAACATGTTACGATAATTTTGGCCAAGACTACAAAAAGATGTCGGAGTACCTTCCTGGTCGTTCAGCTACTCAAATTCGCGTGCGCTACCAGGTTTTATCAAAAAAGAGGGTATCAGCTATCTGGACACTTGAAGAGGACAAGCAGTTGCTTCAACTCATGGCCAATGAGGATTGCCTGACTAATTATTCCAGTGTTTCGAAACACTTCAATGGAAAAACCCGTGTACATCTTAGAGCAAGGTATCTAACCTTGTCAAAATGGATGAAAAGACATCCAAATGCCTCGCTCGATAATGCCCCCAGAAGAGGCGCGCGTCGTCTCGGCCACGGGCTTGCCACAGACAATCTTAACAAAGCcacagaaaaacttaaaaagAGAATAGAATCAGAGATTGAAATTAGAAAGAGCAAAAGAATCACAAGAGAATCACCACTAGAAGTTATAGAAGATGCTATTATAGCTAACCTTGTTACCGAAAATGTCAAACTAGAAGAAGAACGAAAATTCGAAGCCTATGAAGAAGACGATGTCGTACAACTAGACGATGAGTCATTGGCGTTCATACATAATCTGAATGTCACTAATCTCCAAAAAGTGATCATCTTCTTGAGAGGAAAACTAGAACAAAATCTTTTCAAAAACAGCTCCTATGCTGATCAATATCCTGGCTTGCTAGATCCTAAGCGAGACGTGAATCTATTTCAAATCAAGAGTTACTCTAGAAAAGAAAAAACCACGTCAGTGCACGTAAATAGTGCACCCGATATATGGGGTAATAACACTTTAGGCAACTTGTCTTATGTGCTCCCGCCTTCTTACGCCACAATAACAGGATGCCGAAAATTAATGGCCTTTGTCAATTCGAAAGCCAACAGGAAAGACGGCGCTCTACAACCCCCAATCAACATCAACCTTATGGCGAGAAGGAATGCTGTTTTGAAAGAACAACTCTTTCTTTTATCAGAAAGGTTCCACACATTGTTCCTGTTTCCAATACTGCTGTCAAATGAGGGTACTGAACAAGCAGGGATAAAGGCTAAGGAGCAAAATGAAAGAATAAGCACTGGTGCAGTGGGAACTACTCGTGAGAGACTCGAGGGTATCGCTACTAGTTTTGGCGTTCCGGATCATCCTCAGTATACCAAAACCAAAAGAAAGGGATCAGATTCTCCGATTGGAACAGGCATCGACTTGGAGGAACCAGGAGAAGATGAGAAGGACAAACTCTGTGTACAGAAAATTGTTGTTGATGAAAATAGATTTAGATTTGTTACTGCAGGCGAGGGCAAGAAAAGAAAGTTGAATCAATATGTTTTTAGTTGA
Protein Sequence
MDVDSDEEKQLNDIAQINAALEQEEEEASSLFLDASVSDSVISRLSRSIPSSLADETAQEHLRIDSALGLNKLLDEKLRRLEKVLVDRLHECRQKLRDLQAAVTPGERQDRHETFRYINCGKPYFKDKSNFPAPDNEDTILMTKSNMYDFSEITSVPGWTVKDKISVTNLLRKMSIEIKKKEFLSKIAQLKRESKNTDSKTLEKKIDAINRQITGLDKKKLEDIALPIDQEYDWEIVANKLNRRHSAAEYRSLWKVFLHPSVSKTSWSQDEHARLHEIALNHDLQDWDAIAKELNTGRTGYQCFVYFRTNMSNTFTGKKWSKEEEEYLRRLIEYYKEDEYIPWGKVASSMENRTKIQIYNKYFRLVEKRKGRFLPEEDAVILTCYDNFGQDYKKMSEYLPGRSATQIRVRYQVLSKKRVSAIWTLEEDKQLLQLMANEDCLTNYSSVSKHFNGKTRVHLRARYLTLSKWMKRHPNASLDNAPRRGARRLGHGLATDNLNKATEKLKKRIESEIEIRKSKRITRESPLEVIEDAIIANLVTENVKLEEERKFEAYEEDDVVQLDDESLAFIHNLNVTNLQKVIIFLRGKLEQNLFKNSSYADQYPGLLDPKRDVNLFQIKSYSRKEKTTSVHVNSAPDIWGNNTLGNLSYVLPPSYATITGCRKLMAFVNSKANRKDGALQPPININLMARRNAVLKEQLFLLSERFHTLFLFPILLSNEGTEQAGIKAKEQNERISTGAVGTTRERLEGIATSFGVPDHPQYTKTKRKGSDSPIGTGIDLEEPGEDEKDKLCVQKIVVDENRFRFVTAGEGKKRKLNQYVFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-