Epro030168.1
Basic Information
- Insect
- Eudemis profundana
- Gene Symbol
- -
- Assembly
- GCA_947034915.1
- Location
- CAMQQJ010000330.1:983455-990539[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 5.9e-08 5.2e-05 24.1 0.0 3 35 193 226 191 231 0.87 2 5 0.9 7.9e+02 1.1 0.1 22 35 235 249 233 254 0.83 3 5 0.051 45 5.1 0.0 17 35 268 287 261 292 0.85 4 5 0.051 45 5.1 0.0 17 35 329 348 322 353 0.85 5 5 0.1 93 4.1 0.0 21 33 356 368 355 376 0.84
Sequence Information
- Coding Sequence
- ATGGATGTGGAAGAATACAAATTCTTCGGTCTGTGCAAGTGTTGTCTTCAAGATGGTTGTTTCAGGAGTTTGTGGGTTGAATATGATGAGGATGGGGTGGTACAAAACTATGGCGAAATGCTCAACGAGTGCTTTTCTTTGCAATGGCAGAAACCTGAGAACACCCACCTGGAGCAGATCTGCGAGGACTGTGTGAAGCGAACAGCAGACGCATACAGCTTCCGACAGCAGGTACTGATGAGTCATCACCAGCTGAACAGTCACGAGCTGAATGAAGACCCATCCATCGTTTTAGGCTCGGCTTCCAGCGAGCGCAAGTTCAGAATAATAGTTAATGAGGAGCCTGTCCCTGATGTCATGGAACATGACATTGGAGAATTTGAGGAGGTGGAGTATTTGGAGGAAGAAAATGAGAAGGAATTGGTTGAGGTGGAAATTGTTAAAGAACAGCTGAAGGTAGAAGAGGAACAGCTAGTCGATGATCCAGAATTTTATCCCGAAGTCCCAGTTAAAAGGAAATGGCCCCGGAAGAAAAAAAAGAGTGAACGACTCCGCACCTACAAGAACTATACTTTTGACGATTTGAAGCATTGTCTCGAGGCCGTTAAAGAAGGCTCTATGACTGTCGCAGAGGCCTCGGTACATTACAACGTGCCGCGCAAAACTATAGCCGCTAGGATACTGAGCGACAAGCGGGGCGAGGCCTCGGCACATTACTACGTGCCGCGCAAAACTATAGCCGCTAGGATACTGAGCGACAAGCGGGGCGGTGAGTATGAGAGCGTGGAGGCCGCCGGCTTCGTGACTGTCGCAGAAGCCTCGGCACATTACTACGTGCCGCGCAAAACTATAGCCGCTAGGATACTGAGCGACAAGCGGGGCGAGGCCTCGGCACATTACTACGTGCTGCGCAAAACTATAGCCGCTAGGATACTGAGCGACAAGCGGGGCGGTGAGTATGAGAGCGTGGAGGCCGCCGGCTTCGTGACTGTCGCAGAAGCCTCGGCACATTACTACGTGCCGCGCAAAACTATAGCCGCTAGGATACTGAGCGACAAGCGGGGCGAGGCCTCGGTGCATTACAACGTGCCGCGTAAAACTGTAGCCGTTAGGATATTGAGCGACAAGCGGGGCGGTGAGTATAAGTATAGAGCGTGGAGGCCGCCCGCCTCGTGA
- Protein Sequence
- MDVEEYKFFGLCKCCLQDGCFRSLWVEYDEDGVVQNYGEMLNECFSLQWQKPENTHLEQICEDCVKRTADAYSFRQQVLMSHHQLNSHELNEDPSIVLGSASSERKFRIIVNEEPVPDVMEHDIGEFEEVEYLEEENEKELVEVEIVKEQLKVEEEQLVDDPEFYPEVPVKRKWPRKKKKSERLRTYKNYTFDDLKHCLEAVKEGSMTVAEASVHYNVPRKTIAARILSDKRGEASAHYYVPRKTIAARILSDKRGGEYESVEAAGFVTVAEASAHYYVPRKTIAARILSDKRGEASAHYYVLRKTIAARILSDKRGGEYESVEAAGFVTVAEASAHYYVPRKTIAARILSDKRGEASVHYNVPRKTVAVRILSDKRGGEYKYRAWRPPAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -