Basic Information

Gene Symbol
-
Assembly
GCA_947034915.1
Location
CAMQQJ010000016.1:1180141-1193465[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.7e-14 1.9e-10 42.2 0.1 3 89 252 325 250 325 0.89

Sequence Information

Coding Sequence
ATGCACGGGGTATCGATCGGAGTGCGGCCCTGGGCCTCCCCGCCCGCCGAGCAATTTCGCAGCCCACAGCCGCCCAGGCGCAGTAGGCCCGCGCCACTAACACAAGGTAAAATAAAGGATGAAGTCCTAGCGATAAACGACAAGGTGGTCCTCAAAGCCGAGGACCTCCTCTCCTGGGTCTGCTGCGGCGCCGACTGGCGCTGGGGGCTCCGCGCCGTGTGGCGGGGCGCCTGCGCCCCTCCGGCGAATCCTCGCCGCACCCAGCCTCTGCATCACACGAGATTAGACTTCAGTGATGTGGAACGGGAGAAGAGCGCCATAAACGAGGACGCCGACAGTCCCGGCGTCGTGGTGTTCTCGTACCCGCGGTACTGCCGCTACCGGGCGCTGCTGTCGCGGCTCGAGGGCATCCAGGGCGACTGGCTGCGGGACAGCCTCGTGGCCGCGCTCGGCGGGTACGCGGCGCCCACCAAGAACACCAGGATACTGTACTGCAAGGACACGTTCGAGTACCCCGAGCTCGAAGGGCACGAGTTCGTATGCAACCAGCTCGCGCCCAAGCTGAAGGGGCGGCCGCGGGGGCGGCGCCGGAGACGCGCCTCCAAGCACTCGCCCTCGCCCTCCGACCGCTCCAGCGACAGCGACTCGCAGCGGCGCCCCGAGCCCACCGAGCCGCGGCGGCGCCTATCGCTCCGGAACGGCGCGCCGAAGTACAGCGATGAGGAGCCCGACAAGGAGCACTCCTCCGAGGACCGCGCCTTCCTGCACCAGCTCGAGCAGTTCTACCGCGAGCGCCGCGAGCCCTTCAAGATGCCACACTCCTTGAAGGACCTGTCGCTCCGGTCGCTATACAATTCTGTAACGAGTCTCGGCGGGTACGAGGCGGCCTGCAGACATAAGCTGTGGCGGCAGATACACGCACCGCAGCCCAACACCGCGCGCCGCCACTACGAGAGGTACCTCCTACCGCTGGAGAAGCACGAGGTGTCCCGGGGGCTCCGCACGCTGCCCAAGCTCAACGGCGCGCTCGCCGCCCCCGCGCCCCGCACCATCGCCACCATCGAGCTGCCCGACTCCCGGGAGCCCACGCCGGAGCCCCCCGCCGATAGAGACACCGGGGAAGCTAAAGACTTTAGTGTCACTTCCAAGCCTGCCGAAGAGCTAAATAGGGAGTTTCTGGAGTCACTACCCAAGGAAGAAACTAAGTTGAAAATAAGCGTAAAGCCGGTGGAGAAGCTTTTAGAAGAAGGGAAGAAGGAGAAAGAAGAGCCGCGGGAGGGGGCCTTTTACTCTGATCTCGCACAGAAACTCAACCTAGGCAAAGCCGACACGAACTACCTGAGCGATGTCGCGACGCAGCAGCAGGACCTAGTCTCTCGCAGCGCCCTCAGCTCCCTCTCCAGCCTCGTCAATGGACACACGTTGCCCAAGGAACAgAGTCGGCCGCCGACGCGGAGCTCGCTGCGCGCCGTGCGCGTGAagccggcgcgcgcgcagcacaacgcgcccgcgcccgcgcccgcgcccgcctccGCTCCCGCCTCCGCGCCTGCCCGCACTCCGCCGATCCCGCCGCTGCAAGATTCCGCGTCATCGTCCCCGCCGACCAGCACCACCAGCACGCCCGTCACCAACTTCGGCATCCACCACCCGCCGCCGCCCAGCCACAGCGACGACGAGATCGTCGAGGTCCCATACAAGCCCAAAACGCCAGAGATCATAGACTTGGACGAATACCCGGAGAGCCCCCAAGCAGTCAAAAAGAAGAAACTCGACATCCTGAAGGAGCGGGGGTTGGAGGTGACCGCCATCCCCACCGCGCCCGCCCCCTGGCCCCCCACCGCCCCCCTGCCCCCCCTAGCCCCCCTCGTCCTCAACCCCGCCGTGCAGCACCAGATCATGACGCAGGCGCAGATATTCCAAATGTACAACATCATCCCCCCCAACTACGCCAACGGCGTCCAACCCCCCAAGGTCATACAAGCCACTAGCGCCTTCGGCTCCTCCGGACCAGAGAAAACTGTTTACGGAAACCCTAAAGACCCCTTCATGCCGCCTCCCCACGTGCTCCTCGGAACCCCGGTCAAACCGCAGAGGAACAGCACCACCCCCCTCCCCTCCACCCCCCCGCAGGACATCCTAGACTTAACCTGCAAGAGCCTCCAGAGTCCCGGTCAAAAGCCCGCCGTAGAAATAGTCAGAATCCCGACCGTCCCCTCACCCTCGAAAATATCCTCCGCGGCCCAAAATTTGACGAAAAACTACACCCTGGTCGACGGGAAAGCTGTCGTCGGCTCCAATCTAGAGATCACCCTGGTCAATCCGAAGTCCCAAACGCCGACAAAGTCGAGACAGCAGCAGAAACGATCCTCAAACGGGAAATTCGTGTCAGCAAAAACGCCTACACCCCCAAAAGACTACCCGAAGAGCTATATAAGTCCCTCGCCTTCCGGCGCAAAGAAGCCTCCTATAATCGTCCCGAACTACCAAGTCAATCAACGGGACGATGTCTCTCCAACATCATCGACAGGCTCAGGTAACTCCCAAACGAATCTGCTTCAGAACAACTTATTACAGAACGTCTTTAAAGGCCAAAATAGCTTGCAGCAGATGATGGAGATGCAGAAAAACGTTCCTACGATGCCGTACGTTGATCCTATGTATATGAGCGCACTGTATAGCAGCCTCGCTGGGAGTATGGACCAAAGGCAGCTGGCCATGTATCGAGACTTCATGGCGAATCAGTTCAGAGGGTACTCTGGTCTGCTAGGGGTGACGCCGACAACGAAAAACTAA
Protein Sequence
MHGVSIGVRPWASPPAEQFRSPQPPRRSRPAPLTQGKIKDEVLAINDKVVLKAEDLLSWVCCGADWRWGLRAVWRGACAPPANPRRTQPLHHTRLDFSDVEREKSAINEDADSPGVVVFSYPRYCRYRALLSRLEGIQGDWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNQLAPKLKGRPRGRRRRRASKHSPSPSDRSSDSDSQRRPEPTEPRRRLSLRNGAPKYSDEEPDKEHSSEDRAFLHQLEQFYRERREPFKMPHSLKDLSLRSLYNSVTSLGGYEAACRHKLWRQIHAPQPNTARRHYERYLLPLEKHEVSRGLRTLPKLNGALAAPAPRTIATIELPDSREPTPEPPADRDTGEAKDFSVTSKPAEELNREFLESLPKEETKLKISVKPVEKLLEEGKKEKEEPREGAFYSDLAQKLNLGKADTNYLSDVATQQQDLVSRSALSSLSSLVNGHTLPKEQSRPPTRSSLRAVRVKPARAQHNAPAPAPAPASAPASAPARTPPIPPLQDSASSSPPTSTTSTPVTNFGIHHPPPPSHSDDEIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTAIPTAPAPWPPTAPLPPLAPLVLNPAVQHQIMTQAQIFQMYNIIPPNYANGVQPPKVIQATSAFGSSGPEKTVYGNPKDPFMPPPHVLLGTPVKPQRNSTTPLPSTPPQDILDLTCKSLQSPGQKPAVEIVRIPTVPSPSKISSAAQNLTKNYTLVDGKAVVGSNLEITLVNPKSQTPTKSRQQQKRSSNGKFVSAKTPTPPKDYPKSYISPSPSGAKKPPIIVPNYQVNQRDDVSPTSSTGSGNSQTNLLQNNLLQNVFKGQNSLQQMMEMQKNVPTMPYVDPMYMSALYSSLAGSMDQRQLAMYRDFMANQFRGYSGLLGVTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00656929;
90% Identity
-
80% Identity
-