Basic Information

Gene Symbol
Arid2
Assembly
GCA_947034915.1
Location
CAMQQJ010000059.1:222464-258506[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-18 9.8e-15 56.0 0.0 2 89 17 101 16 101 0.94

Sequence Information

Coding Sequence
ATGtctaaaacacaaataaatacaaaatctaGCACGTATCTTAAGGATAAAGAGGCATTCCTAAAGGAATTGAAACAGTTTAATGAGAGTAAAAACATACCATTCAAGATACCTTCAGTGAATTGCATTGATATAGATTTATATCTATTCTATACACTAGTTCAGCAGCGAGGTGGTATCAGCAAGGTTAACTTCTATGATGTGTGGGATTCATTTCTGCGTCCACTGCGATTGCCACACCCTTGCATCAATGGTTCCACTCTGTTACGAAGAATCTATGGAACATACTTAGAAAAGTATGAGAAAGCGAAAGGCCCTCCAAGTAGAGATGATGACAATGATCTGGATGAGGATCTCAGGTCTACACGCGGAAGGGGGAGAGATGTTCCAAGGACACCCCATGGAGGGGGCACATACTATACTgCATCCGGAGAGCCACTCCGAACAGCCCAGACCCGCGTGGCGGGTCCGTCGGAGCGGCTGGCGTTGTCTCTGCTGTCACCCATGCCAAACGAGCAAGACTTCGCGGTCAACGTGTGCACGGTGCTTGCTGCGGACCACTCCAATCGCATGCCGCTAGGGACTACCCCGCACATATTGGACTTCCTGCTGGCTCATGCCGGGGTGTATAACCATATGAGTCTCCGAGACACAATCGGCCGCTCGTACTTCGAGGCCCGCGGCCGCTACCCGCACGAGTTCTGGCAGCTGCGGGCCGGCGGCGGAGGCGCCAAGGAGCTCGCAGACGAGACCAAGTTCTCCCAGCTCACCGGAGATCAGCCGGAGCTGATGGTGCAGGCTCTGGCGGCACATAACACGCTTACGGATTGTCTGATGAAGGAGTGCGGGGGAGAGGAGTTGGTCGAGAAGATTCTAGAAGAGGAATCACACGAGGACTGGGTGACAGAGCCGTCTGAAGACGAGCAACTGTTCGCCCCCGAGCTCCCCGGCGGCGCGGGGTGCGTCTACACACAACGAGTCCTACAGATCGCGTCAATAGTGCGCTCTCTCTCCTTCCACGACGAGAACATCCAGTATTTGGCTAAGAACACGACCCTCATCAGATTCCTGCTACTCTGTGCCAACTGCTGGGTCGGCAGTCTGCGCCAGTCTGGATTGGACGCGCTTGGGAACATATCTACGGAGCTCATTATAAAGGACCCGGCGACTTGCCTCATCTCTCGGCACGTGCTTTCGACTATCCAGTCTGCGCTGGTGTCCCACGATCGCGCCAGAGTGTTGGCAGCGCTGGAGCTGCTCAACAAACTGGCTCAGAACGAGGCCAATGAGGACGCTTTACTTCGGTCCTTGGAGGCTAAGGTTTACAGCGACGTGTGTTCGCTGCTGACGCTACGCGACATCATGGTGTTAGTGTGCACGTTGGAGTGTGTGTACGCGCTGACGTCGCTCGGCGACCGCGCCGGCGAGTGCGTCGCTCGGGTGCCCGGGCTCGTCGCTACGCTCGTCTCGCTCGTCACCGTCGAGGCGCAAAGCTACGGGCCGCGCGCCTGCATACTTATGCGGGTGGTGGAGACTGTGAGCGGGCCGAGCGCGgtggccgccgccgccgagagGGACCAGGACAAGCAGAATCCGCCCCAACAACAACCGCAGGCAGCGGCGACGCCGCCCTTGGCCGCGAAGCCGGCAGAAGCGGTGCCGACGCCGCCCCCCGCGCCCTCCCCGCAGCCCGCTGCGCTTACTAGCATCCAGCACTCGCACATGCAGCAGCGCACCGTGCAGGTCAGTACTGTGACCATCGTATCAGCAGGCAACGCCCCCTTGGCCGCGAAGCCGGCAGAAGCGGTGCCGACGCCGCCCCCCGCGCCCTCCCCGCAGCCCGCTGCGCTTACTAGCATCCAGCACTCGCACATGCAGCAGCGCACCGTGCAGGTCAGTACTGTGACCATCGTATCAGCAGGCAACGCCCCCTTGGCCGCGAAGCCGGCAGAAGCGGTGCCGACGCCGCCCCCCGCGCCCTCCCCGCAGCCCGCTGCGCTTACTAGCATCCAGCACTCGCACATGCAGCAGCGCACCGTGCAGGTCAGTACTGTGACCATCGTATCAGCAGGCAACGCCCCCTTGGCCGCGAAGCCGGCAGAAGCGGTGCCGACGCCGCCCCCCGCGCCCTCCCCGCAGCCCGCTGCGCTTACTAGCATCCAGCACTCGCACATGCAGCAGCGCACCGTGCAGGTCAGTACTGTGACCATCGTATCAGCAGGCAACGCCCCCTTGGCCGCGAAGCCGGCAGAAGCGGTGCCGACGCCGCCCCCCGCGCCCTCCCCGCAGCCCGCTGCGCTTACTAGCATCCAGCACTCGCACATGCAGCAGCGCACCGTGCAGGTCAGTACTGTGACCATCGTATCAGCAGGCAACGCCCCCTTGGCCGCGAAGCCGGCAGAAGCGGTGCCGACGCCGCCCCCCGCGCCCTCCCCGCAGCCCGCTGCGCTTACTAGCATCCAGCACTCGCACATGCAGCAGCGCACCGTGCAGGTCAGTACTGTGACCATCGTATCAGCAGGCAACGCCCCCTTGGCCGCGAAGCCGGCAGAAGCGGTGCCGACGCCGCCCCCCGCGCCCTCCCCGCAGCCCGCTGCGCTTACTAGCATCCAGCACTCGCACATGCAGCAGCGCACCGTGCAGGTCAGTACTGTGACCATCGTATCAGCAGGCAACGCCCCCTTGGCCGCGAAGCCGGCAGAAGCGGTGCCGACGCCGCCCCCCGCGCCCTCCCCGCAGCCCGCTGCGCTTACTAGCATCCAGCACTCGCACATGCAGCAGCGCACCGTGCAGGTCAGTACTGTGACCATCGTATCAGCAGGCAACGCCCCCTTGGCCGCGAAGCCGGCAGAAGCGGTGCCGACGCCGCCCCCCGCGCCCTCCCCGCAGCCCGCTGCGCTTACTAGCATCCAGCACTCGCACATGCAGCAGCGCACCGTGCAGGTCAGTACTGTGACCATCGTATCAGCAGGCAACGCCCCCTTGGCCGCGAAGCCGGCAGAAGCGGTGCCGACGCCGCCCCCCGCGCCCTCCCCGCAGCCCGCTGCGCTTACTAGCATCCAGCACTCGCACATGCAGCAGCGCACCGTGCAGGTCAGTACTGTGACCATCGTATCAGCAGGCAACGCCCCCTTGGCCGCGAAGCCGGCAGAAGCGGTGCCGACGCCGCCCCCCGCGCCCTCCCCGCAGCCCGCTGCGCTTACTAGCATCCAGCACTCGCACATGCAGCAGCGCACCGTGCAGGTCAGTACTGTGACCATCGTATCAGCAGGCAACGCCCCCTTGGCCGCGAAGCCGGCAGAAGCGGTGCCGACGCCGCCCCCCGCGCCCTCCCCGCAGCCCGCTGCGCTTACTAGCATCCAGCACTCGCACATGCAGCAGCGCACCGTGCAGGAAAACGAGCACTTTGCTCAAGCGTGGCTGCGGTCGTCATACGAAACGCTACCCGTCGGTGACAACAGCACTTGCGATGCGCCGGAACTGTACCGGCAGTATCTCGCCTGCTGCGCCAAGCTCAACAGGAAGGGGCTCATCGCGCCAACCAACCTGTCCAGACTTGTCAGAACGGTATTCGGCGGCACAGTCGGTCCGAATACGGTCACACTGCCGAATGGGGAAACACAGCAAGTCTACATCGGCATAAGGTCTAAGAATCCGCAAAACAGAAACAATCCTCCGGCAGGTCCAGCATCACCCATATTGAAAGCGCAGCTGACAAACAAGACTGCTCCTGTGGAAATTAAAACTGTTGTATCGCAACCACAGccgCAGCCTCAGCCCACGCACCCGCATCTGTCGCACGCTCTCGAAGCGAACGCGACCAACACCACACTAATAAAGCACCTGCTCGCCAATAAAGTAAGCCCCGCCCTACAAACCCCGCAAGTAGCCCAAAGACAGCAGAACCAACAACGGGTGGGCGCTCCATCTAGTGGGGTAGTAGTGCAGGCGAATCAATCGGTGATGGATGTAGACCCAGAAGCGTTGATAAAGTGCTCGACTATCACTCCTGGTGGGGTTGCCAGCAGCACACCCACTATTCAGGGCGACAAGGTCCTGATTAAAACAGAGGAAACAACAGCTGTAAAAGAAGAACCAATACAAATACAGATAGATGAACAAACACAACTGACTCTAAAGTCTGCGCAAAACAAAATGTTGGCCGATCTCCTCGAAAAAAAGTCCAACCCGCCGGTCCAAGTTGTCCAAATGGGCCCCCACATGAACGCCCCAACCATACAGATCACAGAGACGGGCCAAATCGTCCAAGTCAAACCAGACGCCAACCCAGTTCTACAATATAATGACGGCATCGTCTCCCAAGGGAGCCAGTATTTCCAAATAAAGAATGAACAGGGCCAACTAATCCAAATCAAGAACGAACAGGGACAAATTATCCAGCTAAAAACCGACCAACTTCAAAATCCTCTTATCCAGTTCAAAAATGACCAGGGGCAGGTGATCCAAGCTAACCAGATTATTCAAAGCGTTATCCAAAGTCAAATAAAAGAGGAGGAATACAGTGAACCGCCCACGAAGCGGGTGAAGATTGAGACTAAATCGGAGAATCCACCCCAGGAAAGTGTATCGAAGACGGCGGCCAATTTATACGCCGCGCTGGCTGCCTCCGCCCTTGAAGATGAAGACGATTTGgTGCCCGTAAAACAAGAGGCCGTTGACGTAATACAACCGCCGGTTATGGTCGGCAGCAGTGATAGCGGGTCTGTCATCATACAGGAGCCAATTTTACAGGTCCAACAACCAACTATGCAAGTACAGCAACCGACGTTGCAAGTGCAGCAACCTACTCTGCAAATGCAGACGACTATGCAGATGCAGCAACCAACCTTACAAGTGCAGCAACCAATGCTGCAAGTGCAGCCTATGGATGTCCAGAATATCCTGACATCGCAGTCCGGTCAGCTTATTCTACAAGGTATAATAAAACACTACTGGCTCTGTGAGTTGTAA
Protein Sequence
MSKTQINTKSSTYLKDKEAFLKELKQFNESKNIPFKIPSVNCIDIDLYLFYTLVQQRGGISKVNFYDVWDSFLRPLRLPHPCINGSTLLRRIYGTYLEKYEKAKGPPSRDDDNDLDEDLRSTRGRGRDVPRTPHGGGTYYTASGEPLRTAQTRVAGPSERLALSLLSPMPNEQDFAVNVCTVLAADHSNRMPLGTTPHILDFLLAHAGVYNHMSLRDTIGRSYFEARGRYPHEFWQLRAGGGGAKELADETKFSQLTGDQPELMVQALAAHNTLTDCLMKECGGEELVEKILEEESHEDWVTEPSEDEQLFAPELPGGAGCVYTQRVLQIASIVRSLSFHDENIQYLAKNTTLIRFLLLCANCWVGSLRQSGLDALGNISTELIIKDPATCLISRHVLSTIQSALVSHDRARVLAALELLNKLAQNEANEDALLRSLEAKVYSDVCSLLTLRDIMVLVCTLECVYALTSLGDRAGECVARVPGLVATLVSLVTVEAQSYGPRACILMRVVETVSGPSAVAAAAERDQDKQNPPQQQPQAAATPPLAAKPAEAVPTPPPAPSPQPAALTSIQHSHMQQRTVQVSTVTIVSAGNAPLAAKPAEAVPTPPPAPSPQPAALTSIQHSHMQQRTVQVSTVTIVSAGNAPLAAKPAEAVPTPPPAPSPQPAALTSIQHSHMQQRTVQVSTVTIVSAGNAPLAAKPAEAVPTPPPAPSPQPAALTSIQHSHMQQRTVQVSTVTIVSAGNAPLAAKPAEAVPTPPPAPSPQPAALTSIQHSHMQQRTVQVSTVTIVSAGNAPLAAKPAEAVPTPPPAPSPQPAALTSIQHSHMQQRTVQVSTVTIVSAGNAPLAAKPAEAVPTPPPAPSPQPAALTSIQHSHMQQRTVQVSTVTIVSAGNAPLAAKPAEAVPTPPPAPSPQPAALTSIQHSHMQQRTVQVSTVTIVSAGNAPLAAKPAEAVPTPPPAPSPQPAALTSIQHSHMQQRTVQVSTVTIVSAGNAPLAAKPAEAVPTPPPAPSPQPAALTSIQHSHMQQRTVQVSTVTIVSAGNAPLAAKPAEAVPTPPPAPSPQPAALTSIQHSHMQQRTVQVSTVTIVSAGNAPLAAKPAEAVPTPPPAPSPQPAALTSIQHSHMQQRTVQENEHFAQAWLRSSYETLPVGDNSTCDAPELYRQYLACCAKLNRKGLIAPTNLSRLVRTVFGGTVGPNTVTLPNGETQQVYIGIRSKNPQNRNNPPAGPASPILKAQLTNKTAPVEIKTVVSQPQPQPQPTHPHLSHALEANATNTTLIKHLLANKVSPALQTPQVAQRQQNQQRVGAPSSGVVVQANQSVMDVDPEALIKCSTITPGGVASSTPTIQGDKVLIKTEETTAVKEEPIQIQIDEQTQLTLKSAQNKMLADLLEKKSNPPVQVVQMGPHMNAPTIQITETGQIVQVKPDANPVLQYNDGIVSQGSQYFQIKNEQGQLIQIKNEQGQIIQLKTDQLQNPLIQFKNDQGQVIQANQIIQSVIQSQIKEEEYSEPPTKRVKIETKSENPPQESVSKTAANLYAALAASALEDEDDLVPVKQEAVDVIQPPVMVGSSDSGSVIIQEPILQVQQPTMQVQQPTLQVQQPTLQMQTTMQMQQPTLQVQQPMLQVQPMDVQNILTSQSGQLILQGIIKHYWLCEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-