Basic Information

Insect: Eudasyphora cyanicolor
Gene Symbol: ush_1
Assembly: GCA_963930755.1
Location: OZ005737.1:233237319-233244902[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.03 3.4 9.9 0.5 1 21 232 252 232 257 0.90

2 9 0.00059 0.068 15.3 0.8 1 23 312 334 312 334 0.98

3 9 0.11 12 8.2 1.0 2 21 364 383 364 384 0.92

4 9 0.1 12 8.2 2.9 2 21 786 805 785 806 0.93

5 9 0.019 2.2 10.5 0.0 3 21 847 865 845 866 0.91

6 9 0.25 28 7.0 0.1 1 23 950 972 950 972 0.97

7 9 0.027 3.1 10.0 1.4 1 23 978 1000 978 1000 0.99

8 9 0.00068 0.077 15.1 0.6 1 23 1072 1095 1072 1095 0.96

9 9 0.68 77 5.6 0.8 2 20 1228 1246 1227 1248 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.03	3.4	9.9	0.5	1	21	232	252	232	257	0.90
2	9	0.00059	0.068	15.3	0.8	1	23	312	334	312	334	0.98
3	9	0.11	12	8.2	1.0	2	21	364	383	364	384	0.92
4	9	0.1	12	8.2	2.9	2	21	786	805	785	806	0.93
5	9	0.019	2.2	10.5	0.0	3	21	847	865	845	866	0.91
6	9	0.25	28	7.0	0.1	1	23	950	972	950	972	0.97
7	9	0.027	3.1	10.0	1.4	1	23	978	1000	978	1000	0.99
8	9	0.00068	0.077	15.1	0.6	1	23	1072	1095	1072	1095	0.96
9	9	0.68	77	5.6	0.8	2	20	1228	1246	1227	1248	0.92

Sequence Information

Coding Sequence: ATGGATGACCAACACGACCCTctccatcatcatcagcagcagcaacaacactcAAATGATGAGCGACGTTCTTCGCCAGCTGCTGTAAATCGCTTAACAAAAGAGactgaaaataaaatacaagacAACTCACCAGATCATAGTGACAGTGAAATGGGCGATCTGGACTCAGAGCCACCCATGAATAAAAGAGCAAAAATGGATTTGCGCAGAACACCGTTGTCTTCGCCATCCCAGCCGGCAGCGGCGGCTAGAACAACACCACATGCAATTGACATTTCCACAACCACAGACACCACAACCTGTGATGATTTACAAAATCAAAATGATGAATCAAATTCTAAAGATCGTAGATCTTGCAGTCCTGGCATTATGAATAGCCCCTCCATAAGTCCCGCCAAATCGGAAGACAATGCCAATGATCGTCATTCCTCTTCACCTGCGTCACATGTAATGCCTAAACTAAGACTTAATGCTTTATTAGCTTCAGATCCCGCTTTAATGCCAGATGCCAAAGATTTAAAAGTGGTCCATGAATCCCAATCACAGCAGAGAAAACAAcgtttgcaacaacaacaacagcagcaacaacaacaggatTCAGAAATCGATCCTCCTGCGGCCAGTGTAGTAGAGCCCATTGTAAAACCTCAACCCACTGCACCCGTTGAAGTGGCTCCACGCATGAAAGTTTTCATGTGTTTACCCTGTGGCATAGGCTTCAGTTCGCCCTCTACCCTGGAAGCTCATCAATCCTATTATTGTTCACATCGCCATAAAGAAAACGAAGATGAAGCAGCCTCCTCGTCGGCAAACCTAAGCGGCGATAAAACCTCCACCTCTCCCTCCCAGGCGGCCGTCAATGCTTCCAGCGTTAATGTGACGACGAGTGGCTCGGAGCCAGCAGCAAAAGCTCCCAAGACTGGCAAACAATATGCTTGCACTCAGTGTTCCTACAGTGCCGACAAGAAGGTATCGCTCAATCGTCATATGCGTATGCATCAGACCTCACCGGCTCCCAGCTCGAACTCGAATAATGGTGGCAATAATGCACTAATGGAAGAAAATTCTAGTCAACAAATTGATCGCTATTGCAGTGATTGTGATATACGATTTAATAATATCAAAACCTATAGGGCTCACAAGCAGCATTATTGCAGCTCAAGGAGAACCGAAGGaCAATTGACACCCAAACTTGAAGTGACTACCACATCGACCACCCCAAAAGCCAATTCCGTACATTCGGGTGCCATTAGTCCACAGACTAGAACCAAAACTCCTACTCCCGCCATGGTAGCTGCTGCAGCAGCGGCTGCCGCGGCCGCTGCTGCTTTACAACAACCCACAGCCACACCATTTTTAGCTTTACCCACCAATCCCATACTGATCATACCCTATTCATTGATACGCTCAGCCAGTCTAATAGCAGGGCCACTaCAATCTCCTTCTCCCTCGGTTGTTAATCCGGAAACCACTTGTTTCACCTTGGATAGTGGTCATTTGAAACCTTTGGCCACCGCTTTAAATATCAATGCTTTGAATGCTGCCTCTACGGCTGCCAATAATTTAGCTGCAGCTGCCTCATCAATCCAGCAGATACCCATAGTTGATTCTACACGCCAGACATCCTCGAATGAAACACTGCTAACTGAAAAGAATATTAGACGAAATGTAGAAGAATCTGCAGAAAATACACCCAAACGTAAGGGAGATGGATTAAGGGAATCTGCTCCATTGGATTTATCACTCCGACGTTCTCCCATTGCCGCATTGTTGCAAAGACAACGCCTGAATTCGGCTGCGGCCGCCGCCTCCTTTCTTGATAgcgaacatcatcatcatcagcgctTAGACATGGAAACCCTCTTGGAAGCTGGCAAAGAAAACCTAGCACTTGATGACACGGGCAGTATAACACCCGAACAAATTGTTTGTGCCCCCTCCTTGCCCAACAGTCCCTCAATGAGTCCATCACCGCGTCGCAGAGCCATTAGTCCCAGAAGTTCGGGACCGGGAAGCACTTCCTCCATGTCACCACCGGTCACAATACCACCACCAGCCGTCACCGGTGCTGCAAATCCCGCAAATATTTTCGATAATTTACATTTAAGATCCATGTTGCCAGCCGAATTGTTAAACCCATTATTGGCAAATAAAAATCTAGAGCTTGCTCTCAAACTGTCGGCGGCAGCAGCAGCCGCCGCTGTAAGTTCCTCTAATAATGCGGCTGGACAACCAGGCAACAACCCTCTATTGGGTTTACCTGTGATGCCACCGGTTGCGGCCACAACAGCTGGACAACCTGCCACCGGAGCGGCAAATCAACCGCAAATCTATGTCAAACAAGGCGTTTCCAAATGCAAAGAATGCAATATTGTTTTCTGCAAATATGAAAACTATTTGGCGCACAAACAACACTACTGTTCGGCCCGAAATCAAGAGCCCAGCGAAGGGGAGGCCAAAGTGTCGTCTACTCCACCCATGGCTTCGGCTGCCTCGCCGGCCGAAACAACGCCGGTTGCCTATCAACAGCTAATCTGTGCAGCTTGTGGTATCAAATACACCTCATTGGATAATTTGAGAGCTCACCAAAACTACTACTGTCCCAAAGGTGGTGGCGCTGTAGCCGCGGCGGCAGCAGCTGCTGCTGCAGTGGCAGCCAATATTGCGGATACTGCGCCATTGGTTTTGCCGCCCAAggaaaaatgtacaaaatgtaaAACTATGCATGAATTTGGTTTGCCATGCCCACCACCGCCAGCAGCATTGCCACAGCCCGCACCTCAAGCCCCAGCAGCGGCAACAGTTCCATCTTTGACACCCACTGCAACTGGCAATCAAAATGTCTACAAATGTCCTTTGTGTGATGCTGTAAGTCTAACAGCCAGCGAAAGTCGCAAGCATATGGAAACTCATGGCACGGTCAAGGCATTCAGATGTACCATTTGTCGCTACAAAGGCAATACATTAAGAGGTATGCGCACTCATATACGCATGCATTTCGATAAGAAATCCACCGATTTGAATGAGGAGCACTTTATGGCCTGCATACTGGAAGATGAATCCATTGAAATTCCCAGTGCGGCCTCTCTAAATCAAGAACATTTAGCTCAACAGCAGCAGAAGCATTTACAACAACAAGTGGCCGTTGCTGCAGCCGTAGCGGCTGGCCTTCAGCAatcgcagcagcagcaacaacagcagcagcaggtgTTCAATTGTGATATTTGTAATTATTCTTCCACATACAAAGGCAATgtgCTCCGTCACATGAAATTAGTACATCCTCACATTATTACCAACTCACCTTCAATTTCTCCCGAAGCAGGAGATTTAGAGACAACAGAAACAAATTCCCTGAGCGGTAGTCTTAATGGTGACAATGGCATTAATAATAGTTTCACCATAAAATCTGAACCTTTAGACCATCACACTACCGCCCCAACAACGCCCGTAGTATTACTGAATCCCCATGATAATAATAATTCACCTATTCCCAGCATTGGACAACATCCCGTTCATGCAAATGATTTAATGCATCACATAAAAACCGAACCAATGGAAGTTGCCATTGAACCGGCAGCAGCCATGATGAGTATAACGCCCACTTTAAGATCTCCAGCCATAGGCCCACCACCACCACTGAATGCCACACCGGAGGAGAATATCAACAATCAAAAGTATTGTCAGACATGTGACATTTCATTTAATTACATGAAAACCTTTCTGGCTCACAAACAATTCTATTGTAAGAATAAATTGCGAAGGCCCGAAACCAATGACAGTCCCAGTCCCAATGCAGCGCCCGGAGCTGCGGTGCCATCACCCAATGCTCTCATGATGATGCAAAAGAACAAAGAGAATTTGCAACAGGAAGCCGCCATTTGA
Protein Sequence: MDDQHDPLHHHQQQQQHSNDERRSSPAAVNRLTKETENKIQDNSPDHSDSEMGDLDSEPPMNKRAKMDLRRTPLSSPSQPAAAARTTPHAIDISTTTDTTTCDDLQNQNDESNSKDRRSCSPGIMNSPSISPAKSEDNANDRHSSSPASHVMPKLRLNALLASDPALMPDAKDLKVVHESQSQQRKQRLQQQQQQQQQQDSEIDPPAASVVEPIVKPQPTAPVEVAPRMKVFMCLPCGIGFSSPSTLEAHQSYYCSHRHKENEDEAASSSANLSGDKTSTSPSQAAVNASSVNVTTSGSEPAAKAPKTGKQYACTQCSYSADKKVSLNRHMRMHQTSPAPSSNSNNGGNNALMEENSSQQIDRYCSDCDIRFNNIKTYRAHKQHYCSSRRTEGQLTPKLEVTTTSTTPKANSVHSGAISPQTRTKTPTPAMVAAAAAAAAAAAALQQPTATPFLALPTNPILIIPYSLIRSASLIAGPLQSPSPSVVNPETTCFTLDSGHLKPLATALNINALNAASTAANNLAAAASSIQQIPIVDSTRQTSSNETLLTEKNIRRNVEESAENTPKRKGDGLRESAPLDLSLRRSPIAALLQRQRLNSAAAAASFLDSEHHHHQRLDMETLLEAGKENLALDDTGSITPEQIVCAPSLPNSPSMSPSPRRRAISPRSSGPGSTSSMSPPVTIPPPAVTGAANPANIFDNLHLRSMLPAELLNPLLANKNLELALKLSAAAAAAAVSSSNNAAGQPGNNPLLGLPVMPPVAATTAGQPATGAANQPQIYVKQGVSKCKECNIVFCKYENYLAHKQHYCSARNQEPSEGEAKVSSTPPMASAASPAETTPVAYQQLICAACGIKYTSLDNLRAHQNYYCPKGGGAVAAAAAAAAAVAANIADTAPLVLPPKEKCTKCKTMHEFGLPCPPPPAALPQPAPQAPAAATVPSLTPTATGNQNVYKCPLCDAVSLTASESRKHMETHGTVKAFRCTICRYKGNTLRGMRTHIRMHFDKKSTDLNEEHFMACILEDESIEIPSAASLNQEHLAQQQQKHLQQQVAVAAAVAAGLQQSQQQQQQQQQVFNCDICNYSSTYKGNVLRHMKLVHPHIITNSPSISPEAGDLETTETNSLSGSLNGDNGINNSFTIKSEPLDHHTTAPTTPVVLLNPHDNNNSPIPSIGQHPVHANDLMHHIKTEPMEVAIEPAAAMMSITPTLRSPAIGPPPPLNATPEENINNQKYCQTCDISFNYMKTFLAHKQFYCKNKLRRPETNDSPSPNAAPGAAVPSPNALMMMQKNKENLQQEAAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00817004; iTF_00817948;
90% Identity: -
80% Identity: -