Ecya001677.1
Basic Information
- Insect
- Eudasyphora cyanicolor
- Gene Symbol
- -
- Assembly
- GCA_963930755.1
- Location
- OZ005734.1:46174585-46194763[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0027 0.31 13.2 0.0 1 23 141 164 141 164 0.97 2 13 0.1 12 8.2 6.1 2 23 213 235 210 235 0.95 3 13 0.17 19 7.5 0.1 1 23 370 393 370 393 0.96 4 13 2.8 3.2e+02 3.7 0.3 2 21 443 462 442 465 0.88 5 13 7.2e-05 0.0082 18.1 0.2 1 23 527 550 527 550 0.91 6 13 0.00024 0.028 16.5 2.1 2 23 601 623 601 623 0.98 7 13 0.00094 0.11 14.6 5.6 1 23 739 762 739 762 0.97 8 13 0.00049 0.056 15.5 0.5 1 23 819 842 819 842 0.97 9 13 9.7 1.1e+03 2.0 1.0 1 15 860 873 860 884 0.75 10 13 0.0019 0.22 13.6 0.9 2 23 892 914 891 914 0.96 11 13 0.8 91 5.4 1.3 1 22 999 1020 999 1022 0.90 12 13 3.7 4.2e+02 3.3 1.9 1 20 1074 1093 1074 1095 0.93 13 13 0.013 1.4 11.1 0.0 2 23 1175 1197 1174 1197 0.95
Sequence Information
- Coding Sequence
- ATGGAGGAGCTGGAGCCCTGGAATATGTTTACCAATGACTTTACACCAGACGATGTCGGCggtggtgatggtggtggtggtgttggcacGGCAGATGAAGAGAATAACGACGGTGGTGATGGTCAAGAAAATAACGACGAAGAACAGTTTGCCATACCCTCACCCGTACAAGACATGCAGGTGAAAGAAGAACCACAGGAGCCCATGGAAGAAGCGTACGACGATGAAAATAGTTTTGGTGGTTTCCATTCAATACTTCATGGTGATAGAGATCCTAACGAAGAAGATGAAGCTCTATTTGATTTCAATTCGGAAAACTCGAATTCAGGTAGAGGTGGTCGATCTGCACAGGCGGAAACTCCCTTATCTGCCGAGGATGAATACTATAATTCCCTGGTTAAATATGAAGATGCCATTGTGTACATTTGTCCGGCCTGTGGTGCCGAATATCGTTCCCAAGAGAACTGGAAAATACATTTGAATTCTATGCATCAATACAATACCAGACGTGGTCTGAATTTCATTCAACTGGATAAATTGTATCACGAATGCATGGAATGCCACAAACGAATTGCCATGCATAGCATGGAGAATTTGCTAAAGCATAAATTCACCCATCTGCCGTATCGTTGCTGTAAATGCTATATATGCAAGCGTCAATACAAATACCGCCAAGATCTTATGATTCACCTAAAGGTGAACCATCGTGATGATTTGATAAATCTTGCTAAAGAGGAGGAGAAATCAAAGAAACAGCTGGAATCACAAAATCAAACTATACGCTCCATTCTTAATAAGCCGCCAAGTAAAAATATGAACACAGCGCGTCCCAGCATAGCAATTGGTCAAGTTAAGGAGAATGCCGTGGATATATTTGAGAATAATTCGGACAATATTGAGGTGCGCAATGAAGTGCttattgatgatgatgatgacgatgcggACAACTCACTGCCTGGTTTACCACCCGCAAAGAGAATAGCTCGAGATTTGCCAACATTTTTAGATGATGCCTCTACAAATGGTTCTGCCAATGAGCAGCGAGGGTCCTCACGAACAACAAAGCTTTTAGATGATATTGATGAGTCACTGGAGGAATACATATTGTTTTCGTGCCCACAGTGTGGTTCTGAAAGTGAAACAACAGGGCAATGGCGACAACATATTGAATCAGCACACGATTTCGGTTCGAGAAAAGGTCTAAAGATGCGAGATATTAATCAGGGACAAGCTCAGTGTCTGGAATGCAATCAGacaATAACCGTGAATACAATACGTAATCTGCAAATgcacaaatttgaacatttaccaCACAAGAAATGGATGACTTGTAAATTGTGTTTTACTCCGTTTAATGTCGCCAAAGACATACTTAAGCATTTAGGGGACAAACATCATTTGAAAGCCGAGAAGAAGAACAATGATAATAACGACGAGGACAGCCAAGAGCCCTTTGGCTTTGGGGCGGATGATTACGATGATGGCGCGGGTGCGGCCGATACGAAAAAGCTTTTGGCCGGCTATGAGGGTAGTATGACGAAGCAGGAGGAACGTGATGCATTCGAACAGCACATTGACTATTTGTGCCCCCAATGTGGCAAAGAGTTTAACGACAAAAAACTCTGGCGTAAACATATGGTGGAAGCTCATCAATTGGGCGATTTGGAGACATTaaattttgagcaaataaatgatCGTCAATTGAGATGCCGAGAATGCGATAAGATAATTACAAATGCCTATGGCATACAGAATGCCCAGCAGCATCGCATCACGCATATGCAATACAAATCATTTGCCAAATGCCGCATATGCCGTAAACAATATACAGATCGTAAAGGTTTGACAAAACACTTGCGGACAGCTCATGGCGTGGGAGCGACAAGTAAGCCGTCGCGTATAACCTCACCGATACCGAATTTCGGTAGCAGCTCCTATATGTTGAAGTCATATAAGGCGAAGCCTTATAAAACGGCGGCCTATCCACAAAGAGAAATTGTCCGGCATAATAACTATACCTATGAAATTTGCTATTTGGAAGAGGAGGAGGacaataatgataatgataattttGCCAGTCGTcgtggcggtggtggtggcagTGGTGTTACTTCGTCAGCTCCTCCCGCCTATGACTTTGCCAAGGGAGATGCCCATTTATATCGCCGCTCTTATCCCGCACCTAAGAGTAGTAATTTAGAGCAAATGTCACGGCATCGTTGTGTCGACTGTGGTTCAAGTTTCTCCTCACATCAAACGCTGCAGCATCATATTAAAACCGAGCATGAATTTGTGGACTTTTCGGCGACAACAAGAAATTCTCCCAAAAAAGTTAATGCCAACAATGCCGAGGAACAATCGAATGATGCCGATGATTTACTCGTGCCCAGTAGTAAACGGGATGTTGATGTGATCCAGCCCGACGAGGCCGCCACAGTAGAGTGtcatttcatttacatatgtccACAGTGTGGCGTTGAATTTAGACTACGGCATCTGTGGCGTCGTCACATTAATATGGAGCATAACTTTGACAAACGTGAATCTTTGGACTTCCGCATCATAGATAAATTCCGCTTCCAATGCAAGACTTGTCATGAGATGGTGCAAAGCTCTAAGCTGAAGGGTTTGCAAGATCACAAGTTCCGCCATTGCCCGTATCGGCAATATTTGAAGTGTTTGATCTGTGGCCAGGCCTATAATCACAAGCCGAATATGATCAGTCATTTAAGGCAGCGTCATAATATTATAGATGCAGAGCCAGGTCAACATGCACCCATTGTAATGGAAAGAAATCACTCGACCAAAGCGTCTGGTGGcagtggtggtggcggcggcgaAAGTGGTTCCTCGAAGAGTGCAGGCGCTGGGGGAGGAGGAGCGAAAAGTTCTGATGCCAGTGCTGCTAATGCCAATGCAAGTCGTCCTCCTGGCCTCAAGACGGTGGAAGATGTGATTTCCTTTCACAATGCCGTCGATCATGAGAGTATTACCTATCATTGTCCCTCGTGTGCGGAAACTTTTGATTCCCATGTTTTTTGGCGTAAACACATTGTGGACGAGCACAATCTCAATAGCCGGGAAGGTTTGAATTTTCGCCAATTGGACGATCATCACTACATTTGTTTACAGTGCTACAAACGTGTCACAGTCACTCACACGAAGGGAGCCATTGGGCAATTACAGTCGCATAAATTCCGTCACTTACCCTACAAGTCATTCCACTGTACCGCCTGTAAGGGTGAGTTTGTGCGCAAACAAATGTTCTTCAAGCATTTGGATAAAATCACCAATAAATGTAGTGGCTTAAATGCTGACAGTGTAAAAGCTGGTGCAGCCGAAGGCAATGACTCCACACAATTCGGTGAGGATTTCGGCGCTGGTGCCGACAATACAATGACCGAAACGCAACAGGATAGCCCCGCCTCATCGGCGAAATACATCTGGCCCACTCGTGCCTCATTGCCGGCGCAACCTACACTACTTGAGAGCGTTGCCGATAACCAAGGCTGTTTCACGCTAAGCTGTCCCCAGTGTGGCATTGAATTTGAAACCACCCGCGGCTGGCGTGAACACATCAACATCGAGCACAATCTAAACAGTCGTTCGGTtctgaattttagaaaaatcaacTCAAAACTACACCTGTGCTTGGAATGCAATGAACATGTTAATGGCCGCAAATTGCGCGATCTGCAAGTGCACAAGTTCAAGCATTTACCTTTTGGAGCCTACCTGCACTGTAGCTTCTGCAGCATGAACTATTTCCATATAAGCAATATGCAAGAGCATTTGAAGAACAAACATCCACAAATGTTGCAGAAAATGAAACCAGAAAACTATGATGACGAAACAGGGAATTTGGATGTGGAAGATGAggatgatggtggtggtggtggcaacACCAAGATGGAGGATGATGATGCTGGTGACGATGGTGCTGACGAGGAGGGTGGTGACAGTCCTCCATGCCTAGAAGATATTGTTGATATTGATCTGCTAGAAGCCGAAGCGGAAATAGAAGAAGTTGATCCTGATAATGTAGAGAACGATGATCAATACCTTTTGGGTTAA
- Protein Sequence
- MEELEPWNMFTNDFTPDDVGGGDGGGGVGTADEENNDGGDGQENNDEEQFAIPSPVQDMQVKEEPQEPMEEAYDDENSFGGFHSILHGDRDPNEEDEALFDFNSENSNSGRGGRSAQAETPLSAEDEYYNSLVKYEDAIVYICPACGAEYRSQENWKIHLNSMHQYNTRRGLNFIQLDKLYHECMECHKRIAMHSMENLLKHKFTHLPYRCCKCYICKRQYKYRQDLMIHLKVNHRDDLINLAKEEEKSKKQLESQNQTIRSILNKPPSKNMNTARPSIAIGQVKENAVDIFENNSDNIEVRNEVLIDDDDDDADNSLPGLPPAKRIARDLPTFLDDASTNGSANEQRGSSRTTKLLDDIDESLEEYILFSCPQCGSESETTGQWRQHIESAHDFGSRKGLKMRDINQGQAQCLECNQTITVNTIRNLQMHKFEHLPHKKWMTCKLCFTPFNVAKDILKHLGDKHHLKAEKKNNDNNDEDSQEPFGFGADDYDDGAGAADTKKLLAGYEGSMTKQEERDAFEQHIDYLCPQCGKEFNDKKLWRKHMVEAHQLGDLETLNFEQINDRQLRCRECDKIITNAYGIQNAQQHRITHMQYKSFAKCRICRKQYTDRKGLTKHLRTAHGVGATSKPSRITSPIPNFGSSSYMLKSYKAKPYKTAAYPQREIVRHNNYTYEICYLEEEEDNNDNDNFASRRGGGGGSGVTSSAPPAYDFAKGDAHLYRRSYPAPKSSNLEQMSRHRCVDCGSSFSSHQTLQHHIKTEHEFVDFSATTRNSPKKVNANNAEEQSNDADDLLVPSSKRDVDVIQPDEAATVECHFIYICPQCGVEFRLRHLWRRHINMEHNFDKRESLDFRIIDKFRFQCKTCHEMVQSSKLKGLQDHKFRHCPYRQYLKCLICGQAYNHKPNMISHLRQRHNIIDAEPGQHAPIVMERNHSTKASGGSGGGGGESGSSKSAGAGGGGAKSSDASAANANASRPPGLKTVEDVISFHNAVDHESITYHCPSCAETFDSHVFWRKHIVDEHNLNSREGLNFRQLDDHHYICLQCYKRVTVTHTKGAIGQLQSHKFRHLPYKSFHCTACKGEFVRKQMFFKHLDKITNKCSGLNADSVKAGAAEGNDSTQFGEDFGAGADNTMTETQQDSPASSAKYIWPTRASLPAQPTLLESVADNQGCFTLSCPQCGIEFETTRGWREHINIEHNLNSRSVLNFRKINSKLHLCLECNEHVNGRKLRDLQVHKFKHLPFGAYLHCSFCSMNYFHISNMQEHLKNKHPQMLQKMKPENYDDETGNLDVEDEDDGGGGGNTKMEDDDAGDDGADEEGGDSPPCLEDIVDIDLLEAEAEIEEVDPDNVENDDQYLLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -