Basic Information

Insect: Eudasyphora cyanicolor
Gene Symbol: -
Assembly: GCA_963930755.1
Location: OZ005737.1:265029553-265033259[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 9.5e-06 0.0011 20.9 1.1 1 23 367 389 367 389 0.98

2 6 1.6e-05 0.0018 20.2 2.5 1 23 395 417 395 417 0.97

3 6 3e-06 0.00035 22.5 1.4 1 23 567 589 567 589 0.98

4 6 3e-05 0.0034 19.3 2.9 1 23 595 617 595 617 0.98

5 6 0.55 63 5.9 2.4 1 23 623 645 623 645 0.97

6 6 0.018 2.1 10.6 1.0 2 23 689 711 688 711 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	9.5e-06	0.0011	20.9	1.1	1	23	367	389	367	389	0.98
2	6	1.6e-05	0.0018	20.2	2.5	1	23	395	417	395	417	0.97
3	6	3e-06	0.00035	22.5	1.4	1	23	567	589	567	589	0.98
4	6	3e-05	0.0034	19.3	2.9	1	23	595	617	595	617	0.98
5	6	0.55	63	5.9	2.4	1	23	623	645	623	645	0.97
6	6	0.018	2.1	10.6	1.0	2	23	689	711	688	711	0.94

Sequence Information

Coding Sequence: ATGGAAATTATTATGAAAGTGAAATGTTCACCAACTCCAGGAGCTGGAGCTGTACTTGGACCAGCTCCAACCCACCATTCTTCGTTAAAAATTATCGATCATCATCGTCAATTGCAGCAACATACCGGTGGTGTGGGTGGTTACAGCAATACAAATACATCACCACAAATCACATCATATATTCCTCCCCCCAGTTCCAATACAGAATGCCCACTGTCAGCATCATCTTGTGCAGAATGCACTGTAGGTTATTGTTGTAATTTACAGACTTGCTGTTTGCCCACGTCCCATGTAACCCTGCCAACTCCACCACCATTATTACCCATACAGACAGACCAATATACTACGTCCAACAATACAAGCCTTACACATCAAACTGCAGAAGATCAGCCAGAATTTGTATCAATTGAGGATGAAAAAGTTAAGGAGTATCTTATGAAATTTGGGCAACAACGAAAATTATATCTGGATACTACAAAACTGACGCGTATTATGTCTGTGCCGCCCTCCAGAACAACCACCAGACCAATTGTGTATGAAATTATTGAACTAGATGATGAAGGTGAAAGGGAAAAACTGAAGCAGATTAAAGAACAGGCTGAAAAATTCCAGGCCAACAAAAAATCATCAGTCCCTTGTATTGATATAAATTTTGCCGCCCGACATACCAGGTCATTGAATCAATTGAATATCAGCTTAATACCAAAACCATCGGAAAACAATTCTATTTCCGAACAACAGACTTCGCCCTTAGTACATTCTCAGAAAGCCAAGACGAGTGTGTCATGCTCAAACCAGAAAATTATAGCTGAAATCAATTTAATAGACAGTAGTGATGACGAGTCGTCTATGGATGATGATGATCCTGAAGAAGATGATGACGACGAAACGCTACCATTAGCAGCGGTCAGTTGTGAATTAGattgtgatgatgatgatgaaaacTCCAATTCATTTGAAACTAACGCTTCATCATTCGCTAATTTATATCAAGTTTCAAAGAGTCGTACACTTTCAACGAAACGTTCCGATGGATCAACTAATGAAAATTTGCTCATTCGTTGGGAAGAATATGAGGGACAACGAGAGCGAGTATTTTTTGAGTGTTTCCTATGTGGTAAAAAGGTACAATCCAGCTATAACTTAAGACGTCACATGATGATCCATACAGGTGAACGCCCATTTGCCTGCGATATGTGCGATCGTAGATTTCGAGAATTTAGTGATCTGAAAAAACATCGACGACGTCACTCAACAGAGCCAAATTTCATATGTATGGTTTGTCGAGAATTTCCTCCGGTAGAAAATGATCCTACGCGTTGCATAAAATGCTGTACTCAATCAAAAAATGCCGTCTTAATGGCGGCAATGAAGACTGGGGAAGAAGAAAATATACTTACGGCAGAGCAGGACGTGGAACAAACTGCAACAGAGACAAACATAACAAACATTccgacaacaacagcaataagaACACCCCCACCAGCAGCCACATCCACAGGGGCAGCTTCATTATTCACAACTATCACTAACATTATGGGTGCAGCAAAAACATCACCCAGAGAAAATTTGTCAACTCCCCAGCAAACTTCTTCGGGCAATTCTACAAGTTCAGAGGATACTCAACGTCTTCTGGATAACATACCAGCCGTGCATCGTCCTGGTCACAATCAACTGGGCATGATCACTCGTAAAGAATTCCCTTGTCCTCTATGTAATCGGGCATTCGGAACCCGCCATAATCTAAAGCGTCACTATATGATACATACGGGAGAGAAGCCATTCAGTTGCACAAAGTGCCGCAAACCTTTCCGAGAATATTCAACTCTTAAGAAACATATGGTAACGCATCAACGTGATCGTTGGTATAAGTGCATGCGATGCCCGTTAAAGTTTCGCGATTTCCTCAAGTATACCGAACACAAAGAGTCACATCCTCATGAGGATGATGAATCCGAGGAACTTCCAGAAGATGCGTCGTCGTCAAAATCTCGCAACAAATATAAATCAAGTGATAGTTATATGGACTCTAATGATGAAGATTCCATGTTGGACGATTGGTTAGAATGTTGTGAATGTGGCCAACGATTTAATGAAATCGACACATACAATGCACATCTCAAAGAAAAACATTCAGCGAAGCAAATACCAGAGACAGATAGCGATGATGAAGCTGTGGAATGTGTTTAA
Protein Sequence: MEIIMKVKCSPTPGAGAVLGPAPTHHSSLKIIDHHRQLQQHTGGVGGYSNTNTSPQITSYIPPPSSNTECPLSASSCAECTVGYCCNLQTCCLPTSHVTLPTPPPLLPIQTDQYTTSNNTSLTHQTAEDQPEFVSIEDEKVKEYLMKFGQQRKLYLDTTKLTRIMSVPPSRTTTRPIVYEIIELDDEGEREKLKQIKEQAEKFQANKKSSVPCIDINFAARHTRSLNQLNISLIPKPSENNSISEQQTSPLVHSQKAKTSVSCSNQKIIAEINLIDSSDDESSMDDDDPEEDDDDETLPLAAVSCELDCDDDDENSNSFETNASSFANLYQVSKSRTLSTKRSDGSTNENLLIRWEEYEGQRERVFFECFLCGKKVQSSYNLRRHMMIHTGERPFACDMCDRRFREFSDLKKHRRRHSTEPNFICMVCREFPPVENDPTRCIKCCTQSKNAVLMAAMKTGEEENILTAEQDVEQTATETNITNIPTTTAIRTPPPAATSTGAASLFTTITNIMGAAKTSPRENLSTPQQTSSGNSTSSEDTQRLLDNIPAVHRPGHNQLGMITRKEFPCPLCNRAFGTRHNLKRHYMIHTGEKPFSCTKCRKPFREYSTLKKHMVTHQRDRWYKCMRCPLKFRDFLKYTEHKESHPHEDDESEELPEDASSSKSRNKYKSSDSYMDSNDEDSMLDDWLECCECGQRFNEIDTYNAHLKEKHSAKQIPETDSDDEAVECV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -