Basic Information

Insect: Eudasyphora cyanicolor
Gene Symbol: -
Assembly: GCA_963930755.1
Location: OZ005738.1:199234160-199243713[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.23 26 7.1 0.2 2 23 192 213 191 213 0.95

2 9 1.4 1.6e+02 4.6 0.5 6 23 223 240 223 240 0.98

3 9 0.00075 0.085 14.9 0.9 1 23 246 269 246 269 0.95

4 9 0.00056 0.064 15.3 2.7 1 23 277 300 277 300 0.94

5 9 0.0013 0.15 14.2 0.9 2 23 306 327 305 327 0.96

6 9 0.038 4.3 9.6 0.0 2 23 333 354 332 354 0.95

7 9 0.012 1.4 11.1 0.6 1 23 391 414 391 414 0.95

8 9 1.5e-05 0.0017 20.3 1.5 1 23 420 442 420 442 0.99

9 9 6.1e-06 0.0007 21.5 3.8 1 23 448 471 448 471 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.23	26	7.1	0.2	2	23	192	213	191	213	0.95
2	9	1.4	1.6e+02	4.6	0.5	6	23	223	240	223	240	0.98
3	9	0.00075	0.085	14.9	0.9	1	23	246	269	246	269	0.95
4	9	0.00056	0.064	15.3	2.7	1	23	277	300	277	300	0.94
5	9	0.0013	0.15	14.2	0.9	2	23	306	327	305	327	0.96
6	9	0.038	4.3	9.6	0.0	2	23	333	354	332	354	0.95
7	9	0.012	1.4	11.1	0.6	1	23	391	414	391	414	0.95
8	9	1.5e-05	0.0017	20.3	1.5	1	23	420	442	420	442	0.99
9	9	6.1e-06	0.0007	21.5	3.8	1	23	448	471	448	471	0.98

Sequence Information

Coding Sequence: ATGGCGGAGTTTATtgtaaaaactgaaaatgcaaaatcAAAGCGACCTCGATCAATAGATGATCTTGTTAACTTTGACTCGTTGCCGAAGCCCGAACCAGATGACGACGAATTCGATGGTGAGGTACCATTCAATATGCTAATAGAAGATGCTATTGCTTTAGGAGGAGATGACACTTTATCGCGTAACGAGTTCAGTCAAGATGACAATGGAGATGTCCAGGAAAAATTTGAAAGCCATAATGATGTGTCGATCGACGATTTTGATGGCGAAGCATTTATGAAAAATCTACTAACCAATAAGCCCAAAGAAAAGGAAGTAAGTGCTGCAAAGCCCGAAATGAGGAGGTCTTCTAGAAATACAAACAGATCATCGGAGAAGACGGCATTTTCAGAACAAAATAATGATAGCATCGGTAAAAAACAGCGTGGTCGCCCAAAGAGAGAAAATGTCCAAAGAAATGACTCCAAAATGAAAATACGATCCGAAAATCGGAATAAATCTGGCGATAGTGACGTGTATAAAGCCAAAATGAAAGAAATAGATGATCAAATATCGCAGTATATGACTTTACATTGTGATGTTTGCAATTCTGCAGCAGATAATTTTGCTGGGCTGAGGATTCACATGCGGGAACATGGCATTAAAAGAGGATATGCTAAATGCTGcaataaaaagtttttgaaaaGAGCACTGTTATTGGATCACATACGTCAGCATCTGGACCCAGAATGTTACAGGTGTGTAGATTGTGAAAGAACATTTGCAGATCGACAGTCCATGCGAAACCATTTTCTTATAAAACACCAAAAGGAAGAAGACAAAAAGTACGAATGTTCGcagtgttcaaaaaaatttgtgaaGAAATACCTATTGGAACAACACAAAATGTTTTCACATCGGGATCGAACTACCACATGTAAAACATGTAATAGGAGATTTGAGACTTTAGACGCACTAGTAGAACACAATAAAATGCATTGTAATTATGGGACCATGTGTGATATATGTGCTAAGGTAATACGCGGACCTGCAGCTTTTAAGCGCCACCAGTTAGAGCACCAAGGAATAACATTTCCTAAAGTGCAATGTGATTTATGCGGTTCTTGGCACAAAGATAAATACGCCCTAAATAAACATAAGAAACGGCATATGGAATCCAAACAACCACACATTTGCGACGTATGCCAGAAGGTATCACCAAGTCGAAGTGCCATGTTAAGCCATAAGAGATATGTCCATGGGACAGAAAAAACTTATGAATGTGGCGTTTGtcgaaaaagttttaaaaagcAATTGTCTCTTAGAGAACATATGACAACTCATACGGGCGAAACATTATACCGATGCCCACATTGTCCAAAAACATTTAACTCAAATGCAAACATGCACGCTCATCGAAAAAAAGTACATCCACGTGAATTCGAAGAAACCCGAAAACTGAGAATACGAAATGCTCATTTAAATCAGCAACCAATTCCACCAATTTCAGTTTTAAGCAATGCAAAAACAGACACACAAGCATTATTAATAATTGGGACTGCAGAAAATGATGAAACGCATAATGTTTTAATAACGACGTCCAATCCAGAAGATTCTCTTAGTGATGATGAAGTTACGAATATGTCAAATAAACATGAACGTAATCCCATACTATATGGTATAAATTAG
Protein Sequence: MAEFIVKTENAKSKRPRSIDDLVNFDSLPKPEPDDDEFDGEVPFNMLIEDAIALGGDDTLSRNEFSQDDNGDVQEKFESHNDVSIDDFDGEAFMKNLLTNKPKEKEVSAAKPEMRRSSRNTNRSSEKTAFSEQNNDSIGKKQRGRPKRENVQRNDSKMKIRSENRNKSGDSDVYKAKMKEIDDQISQYMTLHCDVCNSAADNFAGLRIHMREHGIKRGYAKCCNKKFLKRALLLDHIRQHLDPECYRCVDCERTFADRQSMRNHFLIKHQKEEDKKYECSQCSKKFVKKYLLEQHKMFSHRDRTTTCKTCNRRFETLDALVEHNKMHCNYGTMCDICAKVIRGPAAFKRHQLEHQGITFPKVQCDLCGSWHKDKYALNKHKKRHMESKQPHICDVCQKVSPSRSAMLSHKRYVHGTEKTYECGVCRKSFKKQLSLREHMTTHTGETLYRCPHCPKTFNSNANMHAHRKKVHPREFEETRKLRIRNAHLNQQPIPPISVLSNAKTDTQALLIIGTAENDETHNVLITTSNPEDSLSDDEVTNMSNKHERNPILYGIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -