Basic Information

Gene Symbol
-
Assembly
GCA_963930755.1
Location
OZ005734.1:165034087-165041097[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.14 16 7.8 0.7 1 23 1592 1615 1592 1615 0.91
2 11 2.7 3.1e+02 3.7 1.0 1 23 1772 1794 1772 1794 0.93
3 11 0.001 0.12 14.5 2.8 2 23 1797 1818 1797 1818 0.97
4 11 5e-05 0.0056 18.6 0.2 3 23 1826 1846 1824 1846 0.98
5 11 1e-05 0.0011 20.8 5.8 2 23 1853 1874 1852 1874 0.97
6 11 0.049 5.6 9.2 0.1 2 23 1944 1964 1943 1964 0.96
7 11 0.00012 0.014 17.4 0.4 1 19 1970 1988 1970 1992 0.95
8 11 6.8e-06 0.00078 21.4 1.8 1 23 2000 2022 2000 2022 0.99
9 11 0.00024 0.027 16.5 6.5 1 23 2028 2050 2028 2051 0.96
10 11 0.0014 0.16 14.0 6.4 1 23 2056 2078 2056 2078 0.99
11 11 0.0037 0.42 12.8 6.0 1 23 2084 2106 2084 2107 0.96

Sequence Information

Coding Sequence
ATGGGTGAGAACGTGCAGTGTCCGGTATGCACATTATACCTACACGCAGGAATGAATCTTTCTGATCACTTGGAAACTCATCCGAAAGAACAAGTGATCAGAGCTCTAGTACAAATGACAATTTCTGGGGTTGGAGGAGGTACATCTGCTTTGGCATCTGTGTTAAAAGGCGTAAGCAGTTCTGGCGCAGATGTCAAGAAACCCTTGACAGAACCTGAAGATAAGTCTTTAGCTAatgaaaaaatcaatgaattgaatACAATAAGCACTGGCAGTAGTTGCAATGCAAGTATTAGCAATTCAGTCAGTAACTGCTCACTTTCCAACCAAAGTACCACAAGTAGCCAAAATTCAaacaatatgttaaattttgcaaATGCACATATCGCAGAAAATGTTGCAACTGAGCCAGTGGCGTCTGTAGAACCAGTTTTAAAGTCAGAAGAGACTACCGCGACGAATAAGGCGCAAACGGCGAAAGAGAATACAaatgaaatatttgttaataCTCAGCGGACGTATTCGAATTCGACAACTGATATAACAGACACTAATTTTACCATATTCGGAAATCAGCGATACCATCAACAAAGACAACAACGAAACGTGGGAAGTCCGCAACATCAGCAAATGCCTCCTCCACCAGCACCGCAGGGACAGCATCCCGAAATTTCACGTACAATTTTGCCACAACATCTGCCGCAACCAATGTCATCACAGTCAATGCCGTCAGGATTTCATTCTATGCAGGCCCAACAATTACCACATGCTCCACCGCACCATACTACTTTAGGAAATGTGTCCAATAGTCATGGCCGACAGCCACATGTATTTGCGGGTCAACATCAACAACCACCGCCACCACCCCATCATCAGCAAGATATAAAGGTCATATATTCTTCAGGTTTGCCTCCACCACCACCTCTACAGCTTTTTAGCTATCAGCCCCCATCACAACTTCAACATCATCACCAAAAACCCCCACCGGCATATGGAACTGCTATTAGTCAAATTCGATCTCAAAATAAGCATCAAGTTTCCGGGCAATTCGCAGCGCAACATCATCATGCGTCTATGGCCACGCATCACGATGCTGTTCTCCACCAGCAACAGCAGATGCATCAACAGCAGCCAACACACCATCTTCATCATCTGCGAGTCCAAGGAACAGTGGCCCCGCCACCTCCGATAGCTACGAAACATCTGTTTTCTAAAACAAGCGATGTTCCCCATTCAACGTCGTCTACTATTGTATCCCAAAGTACGAGACAAAATAGCAGCCAATCTCAGCAACATCATCAAAGTAAATATTTCGTACCTCAACAACAGATTGCTGATGTAGAAAATCAAAccctttataaaaattctttaactACACATGACATCCAGAACAAAGCAGTTAAGGGTTCAACAGTTACAAATTCTGATACCGTTACAAATGCGGCGCAGTCACAAGTTGATATTTCTCCGGTGGTAGCATCAGCATCAATGGCTGCGGTCGCAGCATCCACATTGAGCCGACATACAAATTCGCCATTCGCAGCCCTATTAGCAGCTGCTGCAGGAGCACCTTCACCCTCGAACTCCTCCTCTGTTCTACGATATGCCGAATCACCGGTGGCTCATTATCTTGAAAGGGATAATGGCGATTTTATTGTACAAGAAACACCTAAACACATCGTAGAGTGCGTTGAAAAAGATAATGGTGAATTTTCAGTTATTGAACGTATCTATCAATCCCCTCCTAGTGTTTTACATATTCATGATGATGCcgacgatgacgatgatgatacTGAGTGCTCCGAGGAGGGCAGTAAGGCGGACAATTCTGTCGCAAATAATAGTGATAGTAGTGAAAAAGCCGCAAGGGAAGAGAGAAAGGATGGACATGTCAAATCGCAATTTAAAAAGAGGGCCTCATCATCACCAGCAACAAAAGAAGACAACAACCAATGTCGAAATTCCAGCAAAAAGTCAATTGAAGCTAAGAACGCATGTAGGAAGTCTAATAATACTGAAAGCACTACATCTGACAACGAAATTGTTGACTTCGTAAGCATTTCAAGTGATAGTGACGAGGAAGAGTTTATTTCACACGAACGAAAAGACAACAAAAATACCACCGACAAATTTAAAAAGAACGAACCAGCCACATTACCATCTGCTTCAACATCATCAGCCTCCTCCCGTGTACAACATTCAACGCCGACAGGCGCCGAGGCACAAGTTTCTCCTTCGACATCTCACTCGAATTCATCTAACAGTCCCGTTACGCATCAAGGTAGCACTCgtaaaaaatcgtccaaaaataCGATAACTGTTTTGAGTGACGTTCAACTGAATTTGAATGAGTATTTAGACTTAGTAGGTAATATAATTGCTTCAAGTAAAGTGGCAGCTCAACGTAGAACGTTTACTTCGATTGCTCCCATTCCATTAGTGAAAATTGAAAAAGAAGAGCCAATGGATGATTATGCAACGAACGCAGCAGATACTGTAGAACAACCACTACCACCAACACCTTTGAAGGCCAATAAACAAGAGACTGAAGATTTAACTGATAATCCTAGCAGTAGTAGTCCTAGTAATAAACCTAATTTAAGCATAACTGATCAAACACTACAGGAACGGAATGATAAGAAGCCTCAGGTTTTAGAGAATAtgcaagaaaacaacaataatgtaTCACCTCCATCATTTATTAAAAACTCCAGTCAAGTTACCAGTGTAATACGTATGGCAACTAGTCAACATCCCCAACAACAGCTAACACAACAACCACTTCACTTGGTAAACAAATCGAATAATAATATTCCTGAATGTATTTCGACATCCAATGAAGCGAATAAAATTTCTGTCGAAGCGGAAGACCTCTCTCATAATCTGCGTAGTACTCCACCCTGCCTAAACAATCCAGGACAGTCTAAAACGATAGGTCATACAGTATTGGGGCGTAAAGGCCCAAAGAAACTGGTAATTAAACCAATGTCTTCAAAGAAAGATCTGTCTTCTTCAGCACAAGTAATTGATGATCTACAGCCTTCAACGTCTGCCAAAGCCTTAGAAAAATGTTCAAAGACGACAAATGTTGACGACTCTTTCAATGAGAATGAGGTTCAGGTGAAGAATGAGCCCCTAActtcgataactttcgaaaacAATCAATATCATCAGCAAAATGGTTATAGTATATTGGAGCAACATCTCAACTCCAAAGAACCTATTATGGTATGTAAGGAGGAAAAACCGTGCATACAAGAATCCAGCTTGTCTACAGCCATACAAGAAATGAAAGTGGAAAACAATGTTAACGATGATGCACGAGTTCTTTACGACTTTGCAACTTCGAAGAAAGCTAATACAAACAATAAATCTTTAATATTTCCTTCGCCATCGTCTTTATTCGCCAAAATCGAAAGGGAACAGTCGGTGCACAACAACTCCACAAGAAAAATTGGTGAGGACAAAAGCATACATTCAGAGATTGAGACATCATCTTACTCATCTCAATCCGCTATGGATGCAATAAATCCACCTgaagaacaaacaaaaaagtcCTCCACCAATACACTGACATCTTCCGAGCATAATGGAAATTCACAAATGTTTCCTGATTTCCCCTTCAACTATATCTATAGCAACAATGTGACTGAACAAGTGGACATAAAGAATCCCCGGCAATTAGCAACGTTTTACCAAAATACTACCGCGACGACCAGCAATAGCACAAACACACCGATGGCTTTAGAAGACTCTTCTTCCAGCAAAAATTATACGGATTACAACCAGCAACAGCCAACGGGGACGTCGTCGCAAAATCAATGGTTTAATAACTACCAGTCCGCTAGTGAAGCCAATGCTCCATCGATATCTTCAAACCAttctaattcaaatttaaataaccATTTGTCCTCAGATTGCAGCACCGCAGTAGATGGCAATGAAGTTGGTAaatatttagatttggatgaatgCAAGCGAGAACAATGTGTCGACATCGGGGGTTCTGTTGGCGGTACGCGAGATACTATTCCACCACCCCCATCATCTTCTACATCGTGCTCATTTACCGAAAATAGTATGGCTGGCATTTGCTCAACAGCTGGTACTCTGAACATACGAACAGACGAAAAAATGCCCGCCAAAGGTGAAATATCCGAACAGGAAAGTAACTGCGACATTGATAATTCATGGAGCCAGCCGATATATGGAGACATATCGGCTCGATTCTTTAAAACTACATTTCCCGGAATTTTTCAACAAGATAACGGTTGGAATAACGAAGAATATTTTACTGTACAAGACTTAAGTGCGTCAGGAACATCCCAAACCACTAATGCTAACAGCAACAAAACAAAAAGTTTTGATTTCCGCCTTCCATCGGAAGATAATAGTGCAGCCGTTGCAGGAAACAGCGGGAGCAGTGGTTTGACAATTTTCTCTCAAAACTCGAACGATAACTGCAATATGGACGCAATTCCATCAACTTCGGCCAAGGTGAGGAAGCGACGTAAACGAAACTCGCAGGATGGGAAGACGTCTGCACCAAGTTTGAAGAGAGTGCAACCAACGTCAACCATAACATCTCAGCAAATGATGCAAAGTCAAAGTGAAGTACAGGCCATGGATTACAATTTTCAACAACAAGATCAATTACCTAGTACTTCGTCAGCATTTTTGGCTGGACCATCCAATGCTGACATGActgaaacctctccatcctcatcaATTGTATCTCAACAATCGCAACAGCAGAGAATACGCACAAAAGTATATGAATGTGGTCACTGCAATGCAAAATATTCGAAACTCAAGGATCGCAACGCTCATATGGTCGACGTCCACAACTATGTGCGCCAAAATAGACGATTAGTGTGTCTCACAAATGGAATCGCCGTTCCTATGACAGACGCTGTAGCTGTGCCTACAACTAGTGGAGGTAACGATGGCTTGTTGACACCAGCAGATCCAAACAGTATGAGCGATTTTAAGCAGGGCATAGTTAAAATTGAAAGCGAAAATATTCACCGCGATATTTCTGGTTATGAGCATATCAGTGCCGATTTGAGAGCTAAAACTGAAGATGTCGATGATGATAAACAAAATTTATCATTGGTAGCGATTTCTTCATCCACCTCAGCCTCTCAAATAGCTCTGGATGCAAAACCCCCAAATTTCCAACCACTGTCTCTTTCAACAACCACGAGCAAATTAACCACACTGTACCGTATGTTGGTTACGTTTAACATGACAACACTAAAACAAAGCCAAAGAATGTCTGAATTCGACGAAAATCTCATAAAATCATCGATATTCTTTTGTTATATCTGCCGACAAAATTTTAATTCAGTGAAGCTGTACGACGCCCATCTGACCGAACATCCAGCTGAATGCTTTACGTGTGGCAAAAAGTTTCAACGATGGAAAAACTTTTCATTacatttgaaacgacatcttggCTGGAAAGAATTCGGTTGTACTGTTTGCGACAAGAAGTTTGTGGTGCGCAGTGCCTTAGTAGAGCATATGCGGATGCATTCAGGCCTGTCGCCTCTAAAATGCAAAGTTTGTGGCAAACACTTCAAACGATATTCAAATTTAACACAGCATCGTAAACGGCATATGAAACAAGTAATTCGAAGAAAAGAATATGTATGTTATTGTGGCGAAGTGTTACCATCGAAGGCTCGTTTCTTGTGGCATAAGGAGACTCATGACTCGAAACCAAAGTGCTGCCCACATTGTTGCGACCGTTTCGTACATGTAAACTCCCTTAGGCGTCATATACGTCTCGCACATTCGGAAAAATTTGATTACACCGAACccatggagtgtccgatttgtaaGCAAATATTTGCCAAGGCTTCCATGAAGGCTCACATGGCTACCCATTCCACTGATACTCAGTATGATTGTGCAATTTGTAATAAATCATTTTCAAccaaatggaatttaaaaatccATTCGTGGGTTCATGCGAATCGCACTGCGAAACCATTTAAATGTGAACACTGCCCCAAGGCATTCGTGCGCGAAGTTGACTTTAAAAATCACATGAATTCACACAAACAAATAAAGCCCTACACATGCGAAGTATGTGGATGTAAATTTATACGCAAGTATAATTATATGCGCCACAGACGAGAACATCATGGCAATAAGAAGTATACCTGTGATCTATGCAAGAAATCGTTCCATCGCCACTACTACCTTATAGAACACAGACGCATACACACTGGGGAAAGGCCTTTCCAGTGTACGATTTGTGGCAAAAGTTCAACCACAAAAACCAATCacaacaaacatttaaaaatacaccATTCACGTGACCCGTTTACGGTGGAGGTATAA
Protein Sequence
MGENVQCPVCTLYLHAGMNLSDHLETHPKEQVIRALVQMTISGVGGGTSALASVLKGVSSSGADVKKPLTEPEDKSLANEKINELNTISTGSSCNASISNSVSNCSLSNQSTTSSQNSNNMLNFANAHIAENVATEPVASVEPVLKSEETTATNKAQTAKENTNEIFVNTQRTYSNSTTDITDTNFTIFGNQRYHQQRQQRNVGSPQHQQMPPPPAPQGQHPEISRTILPQHLPQPMSSQSMPSGFHSMQAQQLPHAPPHHTTLGNVSNSHGRQPHVFAGQHQQPPPPPHHQQDIKVIYSSGLPPPPPLQLFSYQPPSQLQHHHQKPPPAYGTAISQIRSQNKHQVSGQFAAQHHHASMATHHDAVLHQQQQMHQQQPTHHLHHLRVQGTVAPPPPIATKHLFSKTSDVPHSTSSTIVSQSTRQNSSQSQQHHQSKYFVPQQQIADVENQTLYKNSLTTHDIQNKAVKGSTVTNSDTVTNAAQSQVDISPVVASASMAAVAASTLSRHTNSPFAALLAAAAGAPSPSNSSSVLRYAESPVAHYLERDNGDFIVQETPKHIVECVEKDNGEFSVIERIYQSPPSVLHIHDDADDDDDDTECSEEGSKADNSVANNSDSSEKAAREERKDGHVKSQFKKRASSSPATKEDNNQCRNSSKKSIEAKNACRKSNNTESTTSDNEIVDFVSISSDSDEEEFISHERKDNKNTTDKFKKNEPATLPSASTSSASSRVQHSTPTGAEAQVSPSTSHSNSSNSPVTHQGSTRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKVAAQRRTFTSIAPIPLVKIEKEEPMDDYATNAADTVEQPLPPTPLKANKQETEDLTDNPSSSSPSNKPNLSITDQTLQERNDKKPQVLENMQENNNNVSPPSFIKNSSQVTSVIRMATSQHPQQQLTQQPLHLVNKSNNNIPECISTSNEANKISVEAEDLSHNLRSTPPCLNNPGQSKTIGHTVLGRKGPKKLVIKPMSSKKDLSSSAQVIDDLQPSTSAKALEKCSKTTNVDDSFNENEVQVKNEPLTSITFENNQYHQQNGYSILEQHLNSKEPIMVCKEEKPCIQESSLSTAIQEMKVENNVNDDARVLYDFATSKKANTNNKSLIFPSPSSLFAKIEREQSVHNNSTRKIGEDKSIHSEIETSSYSSQSAMDAINPPEEQTKKSSTNTLTSSEHNGNSQMFPDFPFNYIYSNNVTEQVDIKNPRQLATFYQNTTATTSNSTNTPMALEDSSSSKNYTDYNQQQPTGTSSQNQWFNNYQSASEANAPSISSNHSNSNLNNHLSSDCSTAVDGNEVGKYLDLDECKREQCVDIGGSVGGTRDTIPPPPSSSTSCSFTENSMAGICSTAGTLNIRTDEKMPAKGEISEQESNCDIDNSWSQPIYGDISARFFKTTFPGIFQQDNGWNNEEYFTVQDLSASGTSQTTNANSNKTKSFDFRLPSEDNSAAVAGNSGSSGLTIFSQNSNDNCNMDAIPSTSAKVRKRRKRNSQDGKTSAPSLKRVQPTSTITSQQMMQSQSEVQAMDYNFQQQDQLPSTSSAFLAGPSNADMTETSPSSSIVSQQSQQQRIRTKVYECGHCNAKYSKLKDRNAHMVDVHNYVRQNRRLVCLTNGIAVPMTDAVAVPTTSGGNDGLLTPADPNSMSDFKQGIVKIESENIHRDISGYEHISADLRAKTEDVDDDKQNLSLVAISSSTSASQIALDAKPPNFQPLSLSTTTSKLTTLYRMLVTFNMTTLKQSQRMSEFDENLIKSSIFFCYICRQNFNSVKLYDAHLTEHPAECFTCGKKFQRWKNFSLHLKRHLGWKEFGCTVCDKKFVVRSALVEHMRMHSGLSPLKCKVCGKHFKRYSNLTQHRKRHMKQVIRRKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFVHVNSLRRHIRLAHSEKFDYTEPMECPICKQIFAKASMKAHMATHSTDTQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVREVDFKNHMNSHKQIKPYTCEVCGCKFIRKYNYMRHRREHHGNKKYTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-