Basic Information

Insect: Eudasyphora cyanicolor
Gene Symbol: -
Assembly: GCA_963930755.1
Location: OZ005736.1:93581079-93587583[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.4 2.7e+02 3.9 4.1 1 23 252 275 252 275 0.95

2 9 0.0018 0.2 13.8 5.0 1 23 282 305 282 305 0.95

3 9 2.2e-06 0.00025 22.9 1.8 1 23 315 338 315 338 0.98

4 9 0.093 11 8.3 0.1 3 23 347 368 345 368 0.95

5 9 4.4e-05 0.005 18.8 2.1 2 23 375 397 374 397 0.94

6 9 3.4e-06 0.00039 22.3 0.6 1 23 405 427 405 427 0.99

7 9 3.1 3.5e+02 3.5 0.3 2 23 435 459 434 459 0.90

8 9 0.00028 0.031 16.3 0.5 1 23 465 487 465 487 0.95

9 9 2.7e-06 0.0003 22.6 2.3 1 23 493 515 493 515 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.4	2.7e+02	3.9	4.1	1	23	252	275	252	275	0.95
2	9	0.0018	0.2	13.8	5.0	1	23	282	305	282	305	0.95
3	9	2.2e-06	0.00025	22.9	1.8	1	23	315	338	315	338	0.98
4	9	0.093	11	8.3	0.1	3	23	347	368	345	368	0.95
5	9	4.4e-05	0.005	18.8	2.1	2	23	375	397	374	397	0.94
6	9	3.4e-06	0.00039	22.3	0.6	1	23	405	427	405	427	0.99
7	9	3.1	3.5e+02	3.5	0.3	2	23	435	459	434	459	0.90
8	9	0.00028	0.031	16.3	0.5	1	23	465	487	465	487	0.95
9	9	2.7e-06	0.0003	22.6	2.3	1	23	493	515	493	515	0.97

Sequence Information

Coding Sequence: ATGCTCTCTATCAGTGATTTAGAAAACCATTGTCGAAcgtgtttaattaaattaaatttaaatgtatGTTCTGAGGTTGAAGATCCAAGCCAACTTGTTGTAGTGATCTCTAAATTCCCGGCAATAGAGCAACTGATACATTTATGTCTGAGGAAAGCGAACAACTTAGATGCTGAATATGACGGTTTGGATTTGTTTATGCCTAATATCTGTGAAATATGTTTCGCAAAGTGGTCAGATTTCGCTAGTTACTATGAAGAGCTAGTAGAAAACcatgaagaattaaaaaaaattgtcgataaGGATGTGGATGAGCTGGAAACGACCACCAATTCCGAGCAGATGTTAGAGCACGATACACCGAATATTACCAACAATTCGGCGGCAGTTGAATACTACGACACAATGTCACCTTTTTATCAAGAAGATTTAAGTGAACGAGTGTGTGGCGATTTGAATGACGATGATAATTCCACAACGAACGGCTGCCTACTTAATTGCTCAACACCATTATCACATAATCGAGATAATTTGAATGATCTTCACACAATATTAGAAGGAATGCAAAATGAGAAATCAGCAAATGATATACAACCCGAAACATCTTCCAAACTGTTTAAAAGCACAACCAATAAatgtgagaaaattaaaaaacgacGTTTGAGAAAAACTGGGAATAAAGTTACAGAAAATGGCGGTGAAGCACAAATGTCTTCCAACGATTCTAAAAAAGGATCAATCAAAAAGGTACTACATCGCTGTGAACCATGCAAAAAGTATTTCTATGGGATGCACAAATATGAAGCGCATATGAAACAAGTTCATGAGGGAATTAGAAATGCCTATCAATGTAAACATTGCAGTAAGGCCTAtcgtttctataaaaatctacATGACCATATTGCCTTAAATCATTCCAATGAAccatttttattggaaatgtttaaATGTGATGAATGTAACAAAGCATACAAAACAAAGGTTACTCTACAAAAACACCTGGAAACGAAGCATCAAAATCTTTCAAAATCTATTATTTGCGATCAATGTGGTTTTATAGCAGTCAGTATTTATGGTCTcaataaacatatcaaaaataaacACTCTGTGCCGGAGCAAATAAAATGCGACCATTGTCCGAGGGTATTCAAAAAtccatattatttaaaatatcacACGTTGAACTTTCATAATCCAATGGCTATAAGGCCTTTTAAATGCACAGACTGTAATATGGCTTTTACACGGATAGCATTACTCAATGCCCATAAACGAACTCACCTCAAGATTTCCGAACGTATAAAATGCGATTTCGAAGGGTGTGAGGTACGTTTTCTATTTAATGGGGAAAAGACAAAGCATATGCGATTGGTACACCTGAAGGTGAAGCAGCATATATGTGATATATGCGGAGAAGCGTTTGGAACTGCTCCAACTTTGCGCCACCATCGATATATACACACGGGAGAGAAACCATTCGCTTGTAGTTATTGTGGACAAAAGTTTCGACAACGTTCGGCAATGAGGACACACCAGAAAACACATGAGTCCAAGGAGGAGAAGAAAATGATGGACAATTTGACGGAATCCGATATTAATTTAGAAAACATTCTAATctaa
Protein Sequence: MLSISDLENHCRTCLIKLNLNVCSEVEDPSQLVVVISKFPAIEQLIHLCLRKANNLDAEYDGLDLFMPNICEICFAKWSDFASYYEELVENHEELKKIVDKDVDELETTTNSEQMLEHDTPNITNNSAAVEYYDTMSPFYQEDLSERVCGDLNDDDNSTTNGCLLNCSTPLSHNRDNLNDLHTILEGMQNEKSANDIQPETSSKLFKSTTNKCEKIKKRRLRKTGNKVTENGGEAQMSSNDSKKGSIKKVLHRCEPCKKYFYGMHKYEAHMKQVHEGIRNAYQCKHCSKAYRFYKNLHDHIALNHSNEPFLLEMFKCDECNKAYKTKVTLQKHLETKHQNLSKSIICDQCGFIAVSIYGLNKHIKNKHSVPEQIKCDHCPRVFKNPYYLKYHTLNFHNPMAIRPFKCTDCNMAFTRIALLNAHKRTHLKISERIKCDFEGCEVRFLFNGEKTKHMRLVHLKVKQHICDICGEAFGTAPTLRHHRYIHTGEKPFACSYCGQKFRQRSAMRTHQKTHESKEEKKMMDNLTESDINLENILI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -