Basic Information

Insect: Eudasyphora cyanicolor
Gene Symbol: -
Assembly: GCA_963930755.1
Location: OZ005738.1:27546620-27549655[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.2 2.5e+02 4.0 5.0 1 23 315 337 315 337 0.96

2 10 0.0011 0.13 14.4 1.3 2 23 350 371 350 371 0.98

3 10 0.00036 0.041 16.0 0.8 1 23 397 418 397 418 0.97

4 10 2.5e-05 0.0029 19.6 2.3 1 23 424 446 424 446 0.98

5 10 0.00057 0.065 15.3 2.1 1 23 477 499 477 499 0.97

6 10 3.4e-07 3.8e-05 25.5 0.9 1 23 505 527 505 527 0.98

7 10 0.00017 0.02 16.9 3.5 1 23 533 555 533 555 0.99

8 10 2.8e-06 0.00032 22.6 2.6 1 23 561 583 561 583 0.98

9 10 8e-05 0.0091 18.0 0.4 1 23 587 609 587 609 0.98

10 10 0.8 92 5.4 0.2 2 23 622 644 622 644 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.2	2.5e+02	4.0	5.0	1	23	315	337	315	337	0.96
2	10	0.0011	0.13	14.4	1.3	2	23	350	371	350	371	0.98
3	10	0.00036	0.041	16.0	0.8	1	23	397	418	397	418	0.97
4	10	2.5e-05	0.0029	19.6	2.3	1	23	424	446	424	446	0.98
5	10	0.00057	0.065	15.3	2.1	1	23	477	499	477	499	0.97
6	10	3.4e-07	3.8e-05	25.5	0.9	1	23	505	527	505	527	0.98
7	10	0.00017	0.02	16.9	3.5	1	23	533	555	533	555	0.99
8	10	2.8e-06	0.00032	22.6	2.6	1	23	561	583	561	583	0.98
9	10	8e-05	0.0091	18.0	0.4	1	23	587	609	587	609	0.98
10	10	0.8	92	5.4	0.2	2	23	622	644	622	644	0.91

Sequence Information

Coding Sequence: ATGGCTGACGATCAAGCTGTTGGTTTTACAGAAACAAATGGAGGTGACTGGTACACCACCTATGAGAATCTGGGCTACGAAGCAACAGATGTGAATGTCAACGGGAATAATGTATTCTTTCAGCCAAATCAGACAATTATAAAACAAGAATCTGTTGTGGTACACCAAACAGACGATGTGCCATATAATGCAGGAGAAGAAGATTCTGAGGAATTTATCTTCACTGATTGTGTGGAAGATGCAGTTGGAGAAGGAGTTGAAAATCTGGATAATGACTTGTCTAAACATAATCTAGTGCTCAAGGAAATCATAACCGAACAAGGTTTGATTAGGGAGAGTTACTTTTGTCAAGAATGTTCTGTGGAATATAGCGATATCAATGAATTTCTTCACGAACATCCTGGTACACAACTCCTAGAAAATCCCGAAGAAGATTGTGAGAACGCAAAAATGGAGCCTGTTGAGGAGACAATAGAAGAAAATGAAGTGCTAGTGCTTAATGAAAGAGAAGTGGATTCACAACATGATAAACTTTGGGATTTAGTAGATAATATAATAGAAGAAGACCATAATGATGATCAAGAATTGTCCGACCTAATACGTTTGAATAAAACAGAGGAAGAAGAGGATTTGGGCCCCAGTGTAAAGACTAAAACTGAAACTGTAGATACTGATAGCGAACATTATTTTTGCTATGAATGTCGGCAATTATTTACCGATTTGAATACTGCCGAGGAGCATGATTGTGGTGCGCCAAATGCCGAAACAACGGAAGAACAAATGGCCGAGCCGGAAGAAGAGCAGCAGGACGAAGCGGCTGAGGGGGAGGATTATTCTTGTGTttattgccaacaaatgcactcaTGCTATGAAGATATGATAAATCATATTTCAAATTGCGAACTAAATgaAACCGTTCCTCTAGCTACCAAACCAGCAGCTCATCATTGTGACATATGTAATAAAGATTATCTTAGCCTTCGTTCCTACTACAATCATCAGCGTTTGCATAAAAAGATGAAGATCGTGGCACCTCAAGGGCCTGCCAAATGTGAAATATGTAATACACTATTTCAatcagtaaaaaatttaaaATTACACATGAAAATGCACAATGAGCGTTCGCTTAAATCTATACAAGAAGCATTACCTGCCGGGGCTCTAACGGAATACAGTGAATTAAATCAATTTTACTGTGAAATATGTAATAAAAGCTTCGATCAAAGACTATTGGCCATACACAAAAATATGCATCAAAATGTGGAGGAATATAATTGTAGTAAATGTAATAAACAATTTGATAACTCAACTAATTATGAAATGCATATGCAAATGCATAATGAAACTCGTGGCAATAGTATAAAACAAACTATAGCTCCAGATCTTAATATTTTTGGTAATACTTCCTGCGATGTAACCCGTAAAAAACATTCTTGCCAGTATTGTGGCAAAGAGTTTCAGAGGCCGTATGAAAAAGTAAAACATGAACGTATACACACCGGAGAAAAGCCTTACAACTGTGAGGTGTGTGGCAAAACGTTCCGCGTTTCGTATTCATTGACATTACATCTGCGCACCCACACCGATATTCGTCCTTATGTTTGTGCCACCTGCAACAAAAGATTTAAACAGCAATCGGTTTATGTGCATCACCTCAAAACTCATGTAGCCGAAAGGCAATATCGCTGTGAGGAATGTGGAAAAAGTTTTCGAACCTCCGTTCAATTATGTGGCCATAGAAACAGCCATAAGAAACCCTTCAATTGCACTGAATGTAATCGTCCTTTTGCCTCGATGTATGCCGTCAAGATACATATGAAAACTCACAACAAAGGCAATAAggcaaataaaaatttgaaaaatcgctGCGATCTCTGTGGTGCCACGTATGCACGAATCTTTGCTTTACGCTTTCACTTAAAAGAACAACATGGTGTCGAGGTGGATCCTGCCCAACTATTGGATGCTGAGCATTCTTCTTTTTCCGGCAAAGATATGGACGTAGAAACGGCCATTCTAATGAACGCTGCCAATGAGGCGCAATTGGGCGACGAACACAATGGGGAAATGAGTTTTATGAATGCCGATGATGATGATGTGGAGGGAGATCACAATAATGAAACGCCTCAAATCGACGACTCGAATGGTGCAGCGCTCTTAAATCATGATGATGATCTGGATGAAACGGTAGCGGCTACACAGACAATAATGCAAAGAGAAGAtATTATTGTTGACAATTTTCATGCAGAGGAAGTCATAACGGATTGGTTAAAATAG
Protein Sequence: MADDQAVGFTETNGGDWYTTYENLGYEATDVNVNGNNVFFQPNQTIIKQESVVVHQTDDVPYNAGEEDSEEFIFTDCVEDAVGEGVENLDNDLSKHNLVLKEIITEQGLIRESYFCQECSVEYSDINEFLHEHPGTQLLENPEEDCENAKMEPVEETIEENEVLVLNEREVDSQHDKLWDLVDNIIEEDHNDDQELSDLIRLNKTEEEEDLGPSVKTKTETVDTDSEHYFCYECRQLFTDLNTAEEHDCGAPNAETTEEQMAEPEEEQQDEAAEGEDYSCVYCQQMHSCYEDMINHISNCELNETVPLATKPAAHHCDICNKDYLSLRSYYNHQRLHKKMKIVAPQGPAKCEICNTLFQSVKNLKLHMKMHNERSLKSIQEALPAGALTEYSELNQFYCEICNKSFDQRLLAIHKNMHQNVEEYNCSKCNKQFDNSTNYEMHMQMHNETRGNSIKQTIAPDLNIFGNTSCDVTRKKHSCQYCGKEFQRPYEKVKHERIHTGEKPYNCEVCGKTFRVSYSLTLHLRTHTDIRPYVCATCNKRFKQQSVYVHHLKTHVAERQYRCEECGKSFRTSVQLCGHRNSHKKPFNCTECNRPFASMYAVKIHMKTHNKGNKANKNLKNRCDLCGATYARIFALRFHLKEQHGVEVDPAQLLDAEHSSFSGKDMDVETAILMNAANEAQLGDEHNGEMSFMNADDDDVEGDHNNETPQIDDSNGAALLNHDDDLDETVAATQTIMQREDIIVDNFHAEEVITDWLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -