Ecya022717.1
Basic Information
- Insect
- Eudasyphora cyanicolor
- Gene Symbol
- zfh1
- Assembly
- GCA_963930755.1
- Location
- OZ005735.1:260461896-260466086[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 4.7e-05 0.0053 18.7 2.6 2 23 384 405 383 405 0.97 2 11 0.0023 0.27 13.4 0.3 1 23 411 435 411 435 0.96 3 11 0.14 16 7.8 3.2 1 23 442 467 442 467 0.98 4 11 0.0003 0.035 16.2 0.1 1 23 476 498 476 498 0.97 5 11 0.0061 0.69 12.1 1.5 1 23 506 530 506 530 0.97 6 11 0.027 3.1 10.0 2.9 1 23 536 558 536 558 0.97 7 11 0.00032 0.036 16.1 0.4 1 23 564 587 564 587 0.97 8 11 1.8 2.1e+02 4.3 2.1 1 23 598 620 598 620 0.80 9 11 1.5e-06 0.00017 23.4 0.2 1 23 626 648 626 648 0.98 10 11 0.00057 0.065 15.3 1.1 1 23 655 677 655 677 0.98 11 11 0.00052 0.059 15.4 0.7 1 23 684 706 684 706 0.98
Sequence Information
- Coding Sequence
- ATGCACACAGAAGACTTGTTGAACGAGTTGTTGATAGAGGAAGTAAAAAAGTATGAATTTATATACAATAATGCGCATCCAGATCATGGCAAAAGGGTACCAAGACAACAAACTTGGACAACGATATCTTCGATTGTTGGTGAAACAGttcaaCAATGTAAACGTCGATGGTTTGGTTTGAGGAAACGTTTTGCCAATGAATACGGGAGAATATCGGACAATGGTGCGGAGGAATATAAATCCGATTGGAAATATTTTGATGCTATGGTTTTCTTGAAAGGATATGTCGACTCAAATCAaaattttctagaaagacttAAGAAAATCTCTAAAAGAGATTCCTTTTGCCGAGCATGCCTTTGTCCAATTAAACCGCCTTCCGAAGAAGCGGACtctaaattttacaatatttttaattcgGAGAATTTAGACATGAAACTAATAcaatgcacaaatttaaaatgtgttcCGTGGGATGAATATCCACATTCTTTGTGTGTGAATTGTTATGAAAAGGTTTTGGATTTCTATAATTTCCAATGTATGTGCCGCACTTCTCTCGAAAAATTCAACGTTATGCTGGAAACACAAATGGAATTGAAAGATGACAGTGAAGGAGAAAAAAGCGCAGAAAATCGTTTACATGTCACAGAATATGCTGATATAAACTGTATTGCGCCGGAAGAAAAACTTTCAACAAATGCAGCTGTAACAGTGGAGGAACAACAAAATGCAAATGAATCAGAAACTACTTGTGTCGATCCATTGGCGGATCGAAACACTGACGATTTTGTACGTTTGGAAAATATAGAAATCAATGACTATCCCAAAGAAAACCaggaaattaaagaaataatgaaaaaaggtaCGCGAAAGAGAAAAACCGCGATTTTGACGAAAGGCATTGAGAAAAGTGATATAAGTGCTGAAAAGATTCAAACGGATGTATCCGCTAGGAAGAGGAAATCGACAAAGAATAACAAGAAACCTCCATTCTGTAATGAATCGGAGAAGTCAGAAGCAAAGGAGGACATTGATTTAAATTCTGATCAAGAACCTGATGATTACCCAGATGATGACGTGTCGTATTCGGATTATTCAGAAGCATCGGAAGGTGAGAATGAGAAACATCTTAATAAACGTTATCTTAAATGCGACGATTGCCCGCAAACTTTTCGTTTTCAACATCGCTTGGAAGCCCATCAGCGAAGACACCAAGGATTGCAAGGATACCCCTGTACATTTGAAAATTGTCAACGCGCCTACAATCGCTTGGGTGATTTGCGAAACCATCTCAACGATCATAATGGTATTCCGAATGTGTACAAATGCCCCATTGAAAACTGTAATATGGTGTATACATGTTTCTCTGGTTTAAACAAACataaaagaaaatttcataaatgcgGCAAAGAACTAAAGAAATATCCATGTGAAACGTGCGGTAAAGTTCTAACTAACCCAAGATCTCTGACGGGACATCGGTTCATTCATCTAGATAAGTCACAATGGCCTTATGTATGCGATGAGAAAGACTGCACCCGAAGATTTCGTTTGATGTCACAGCTGTCAATACATAAGAAGCGCCATGCCGGTATTAAGAACTATGTCTGTCCACACTGTGGCGTCCGCAAGACTACATGCACTGaactaaaaattcatataaattttCATACATTCGAACAAAAATATCCCTGTGAATTTTGCTCAAAAGTCTTTAAAAGCGTGGGTATGATGAGAACTCATATAAACAGGGTGCACGAGGGAAAGAAACCAGCAAATGATATAACTTTTGTTTGCTCTTTTTGTGATCGAAAATTTGGGTCTCTTCAATCAAAGAAATTTCATGAAATGACCCACACAGGTGAAAAACCATATGTATGCGAGGAGTGCGGAAAAAAGTTTACCTATCCATCGGGACTGGCCTCACATAAAAATATGCATTTGAAGGGAGACAATCCATATGTTTGCGACGAATgcggaagaaaatttaaatggCCATCGGCTCTCAAATGTCATATGAGGTTGCACTCTGAAGTTTCGAAACCATATTCCTGTGAAGAGTGTGGCAAAGGTTTCCGATGGCCGGGATCGtattacaaacataaaaaaacgcaTATGAGACAGGAGGAAGGAAATTCCGAGGATATCGTTGATGAGGCAAATGTAGTTCATAATATGGAACCATCGGAAGAAACACCGCCAGTACCCACAGACCCATCAAACACCAAGTACGAGATTACGTATTTACAATACACAACAATCGATAtggatacaaataaaattattgaataa
- Protein Sequence
- MHTEDLLNELLIEEVKKYEFIYNNAHPDHGKRVPRQQTWTTISSIVGETVQQCKRRWFGLRKRFANEYGRISDNGAEEYKSDWKYFDAMVFLKGYVDSNQNFLERLKKISKRDSFCRACLCPIKPPSEEADSKFYNIFNSENLDMKLIQCTNLKCVPWDEYPHSLCVNCYEKVLDFYNFQCMCRTSLEKFNVMLETQMELKDDSEGEKSAENRLHVTEYADINCIAPEEKLSTNAAVTVEEQQNANESETTCVDPLADRNTDDFVRLENIEINDYPKENQEIKEIMKKGTRKRKTAILTKGIEKSDISAEKIQTDVSARKRKSTKNNKKPPFCNESEKSEAKEDIDLNSDQEPDDYPDDDVSYSDYSEASEGENEKHLNKRYLKCDDCPQTFRFQHRLEAHQRRHQGLQGYPCTFENCQRAYNRLGDLRNHLNDHNGIPNVYKCPIENCNMVYTCFSGLNKHKRKFHKCGKELKKYPCETCGKVLTNPRSLTGHRFIHLDKSQWPYVCDEKDCTRRFRLMSQLSIHKKRHAGIKNYVCPHCGVRKTTCTELKIHINFHTFEQKYPCEFCSKVFKSVGMMRTHINRVHEGKKPANDITFVCSFCDRKFGSLQSKKFHEMTHTGEKPYVCEECGKKFTYPSGLASHKNMHLKGDNPYVCDECGRKFKWPSALKCHMRLHSEVSKPYSCEECGKGFRWPGSYYKHKKTHMRQEEGNSEDIVDEANVVHNMEPSEETPPVPTDPSNTKYEITYLQYTTIDMDTNKIIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -