Basic Information

Insect: Eudasyphora cyanicolor
Gene Symbol: -
Assembly: GCA_963930755.1
Location: OZ005738.1:159853306-159862346[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0084 0.95 11.6 0.5 1 23 15 38 15 38 0.96

2 15 0.0072 0.82 11.9 0.4 2 23 45 67 45 67 0.94

3 15 0.056 6.4 9.0 4.1 1 23 74 97 74 97 0.93

4 15 1.1e-05 0.0012 20.8 1.2 1 23 103 125 103 125 0.98

5 15 0.0082 0.93 11.7 6.1 1 23 131 153 131 154 0.96

6 15 7.1e-05 0.008 18.2 0.1 1 23 178 201 178 201 0.97

7 15 0.0011 0.12 14.4 0.3 2 23 208 230 208 230 0.95

8 15 0.0088 1 11.6 1.6 1 23 237 260 237 260 0.93

9 15 9.6e-06 0.0011 20.9 1.3 1 23 266 288 266 288 0.98

10 15 0.062 7.1 8.9 7.5 1 23 294 316 294 317 0.95

11 15 0.026 3 10.1 0.2 1 23 340 363 340 363 0.92

12 15 0.18 20 7.4 0.7 2 23 370 392 370 392 0.96

13 15 0.027 3.1 10.0 1.3 1 23 399 422 399 422 0.91

14 15 1.6e-06 0.00018 23.4 1.7 1 23 428 450 428 450 0.98

15 15 0.00012 0.013 17.5 5.4 1 23 456 478 456 479 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0084	0.95	11.6	0.5	1	23	15	38	15	38	0.96
2	15	0.0072	0.82	11.9	0.4	2	23	45	67	45	67	0.94
3	15	0.056	6.4	9.0	4.1	1	23	74	97	74	97	0.93
4	15	1.1e-05	0.0012	20.8	1.2	1	23	103	125	103	125	0.98
5	15	0.0082	0.93	11.7	6.1	1	23	131	153	131	154	0.96
6	15	7.1e-05	0.008	18.2	0.1	1	23	178	201	178	201	0.97
7	15	0.0011	0.12	14.4	0.3	2	23	208	230	208	230	0.95
8	15	0.0088	1	11.6	1.6	1	23	237	260	237	260	0.93
9	15	9.6e-06	0.0011	20.9	1.3	1	23	266	288	266	288	0.98
10	15	0.062	7.1	8.9	7.5	1	23	294	316	294	317	0.95
11	15	0.026	3	10.1	0.2	1	23	340	363	340	363	0.92
12	15	0.18	20	7.4	0.7	2	23	370	392	370	392	0.96
13	15	0.027	3.1	10.0	1.3	1	23	399	422	399	422	0.91
14	15	1.6e-06	0.00018	23.4	1.7	1	23	428	450	428	450	0.98
15	15	0.00012	0.013	17.5	5.4	1	23	456	478	456	479	0.96

Sequence Information

Coding Sequence: ATGTATTTATCTAGACATCTTGAATATCATACTCCCAAGAAATTCATTTGTGATATCTGCGGTAAAACTGAGCCGACTATTCACGCCCTCAAGAAGCACGAGAAAAAGGTGCACACGCCCAAAGTGCCCGAACAGTGCACCTATTGTGGCAAATGGTACTCTAGTCAGTGGACGGTGCGACGGCATGTCCTTAATATGCATGTGCGAGCCGATGAAGATCACAGTTGTGAGATTTGTGGATTTGTATCGTCGACGCGCGAGGCGAAAAAGAAACATATGCACTTTAAGCATAATCCCGAAAAGAGACACAAATGTTCGATGTGTGAGAAAGCCTTTAAGACGCCCACTCTATTGAAGGAGCATGTGGCCACCCACACGGGCGTCGATTTGTATAGCTGTAACTACTGTGAGGCCACATTCAAATCGAAGTCCAGACGCTCGACTCATTACAGACGTCATCATCCCGTGGAATTTCCCTGTGAGGTGTATTTGAATAATCATCTTAAGAAAAAACATAATACATCCAAGGGATTTCCCTGTGATCTATGCGGCATAGTCACACGTACTCCCAAGGCCCTACAGAGACACAATCGTAAGATTCACACGCCCCGAGATCCGGAACAATGCAACTATTGTGGAAATTTATATGCCACTCGAGCGACGTTGCAAAAGCACATTTTAAATATGCATGTCCTGGTCGATGAAGAGCATCGTTGCGAGATTTGCGGTTTTGTATCTTCCACCAAGGAGGCCAAACGAAAACACATAGAGTTTCGCCATAATCCCGTAAAGAATCATAAATGTACAATGTGTGAGAAGGCCTTTAAAACACCCACTCTGTTGAAAGAGCATGTGGCTACCCATACGGGCATCGATTTGTATAAATGTGCCTATTGTGAGGCCACATTCAAATCGAAATCGAATCGTTCCACCCACTGTAGACGTCATCATCCCGTAGAATTTTCATGTGAGGCGCACTTAACCAGACATGTTAAATACCATAATCCTTCGAAGACATTTATTTGTGATATATGCGGTAAAGCCGAGACTACGATAACCACCCTGAGGAAGCACAAGGAAAACGTTCACGAACCCAAAGTCCCCGAGCAATGTCGTTATTGTGGCCTATGGTACTCTAGTCGACGCACAGCTCTGCGTCACATAAGAAATATGCATTTGCATGCAAATGAGGAACATCGCTGTGAGATTTGTGGTTTTGTATCGTCTTCGAAACCGGCCAAAAAGCGACACATCGATTTCAAACATAATCCCGAGAAGAAACATAAGTGTACCATGTGCGAGAAGGCTTTTAAAACGCCCACTTTGCTAAAAGAGCATATGGCTACACACACGGGCATCGATTTGTATAAATGTGCTTACTGTGATGCTACATTCAAATCGAAATCCAATCGTTCAACACATTATAGACGCCATCATCCAGTGGAATATAATATGAATATGATCAGACGTTCTCGTCCGACAGCTATAAATAATTATGAGAACACAActtaa
Protein Sequence: MYLSRHLEYHTPKKFICDICGKTEPTIHALKKHEKKVHTPKVPEQCTYCGKWYSSQWTVRRHVLNMHVRADEDHSCEICGFVSSTREAKKKHMHFKHNPEKRHKCSMCEKAFKTPTLLKEHVATHTGVDLYSCNYCEATFKSKSRRSTHYRRHHPVEFPCEVYLNNHLKKKHNTSKGFPCDLCGIVTRTPKALQRHNRKIHTPRDPEQCNYCGNLYATRATLQKHILNMHVLVDEEHRCEICGFVSSTKEAKRKHIEFRHNPVKNHKCTMCEKAFKTPTLLKEHVATHTGIDLYKCAYCEATFKSKSNRSTHCRRHHPVEFSCEAHLTRHVKYHNPSKTFICDICGKAETTITTLRKHKENVHEPKVPEQCRYCGLWYSSRRTALRHIRNMHLHANEEHRCEICGFVSSSKPAKKRHIDFKHNPEKKHKCTMCEKAFKTPTLLKEHMATHTGIDLYKCAYCDATFKSKSNRSTHYRRHHPVEYNMNMIRRSRPTAINNYENTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -