Ecya034686.1
Basic Information
- Insect
- Eudasyphora cyanicolor
- Gene Symbol
- -
- Assembly
- GCA_963930755.1
- Location
- OZ005737.1:30484192-30488463[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0024 0.27 13.4 3.2 3 23 92 113 90 113 0.94 2 15 0.00012 0.013 17.5 1.5 3 23 121 142 119 142 0.97 3 15 0.066 7.5 8.8 5.4 2 23 155 177 154 177 0.96 4 15 6.1e-05 0.0069 18.4 1.9 1 23 262 284 262 284 0.98 5 15 0.0004 0.045 15.8 2.0 1 21 290 310 290 312 0.90 6 15 0.01 1.2 11.3 1.3 1 23 321 343 321 343 0.98 7 15 0.026 2.9 10.1 2.8 1 19 351 369 351 371 0.93 8 15 0.0019 0.22 13.7 0.8 1 23 412 434 412 434 0.98 9 15 0.0015 0.17 14.0 3.9 1 23 440 462 440 462 0.99 10 15 5.3e-05 0.0061 18.5 2.2 1 23 468 491 468 491 0.95 11 15 0.035 3.9 9.7 8.1 1 23 498 520 498 520 0.99 12 15 0.0005 0.057 15.5 0.8 1 23 585 608 585 608 0.94 13 15 0.00013 0.014 17.4 3.3 1 23 614 636 614 636 0.97 14 15 7.9e-05 0.009 18.0 0.7 2 23 648 669 647 669 0.97 15 15 2.5e-05 0.0028 19.6 1.8 1 23 675 700 675 700 0.97
Sequence Information
- Coding Sequence
- ATGGCAACCGTTGAAATCCTAAGCGATATTCGTTTGCCACCGCATTTCTGCATAATTTGCAAATTACAAATCGAAAGCGACATAGATTTGAGACAGCACTACTATGAGGAACATCaggtaaatttttttgttgacagCAGCTATGCAGAAGAAGAGATATTGCAGGTCAATGAATCCCAAGGAGAACAGGAGAAAAAGCTACTGCTGCAAAATAAAACCAAACAGAGAAAACGGAAAACCGATGGAGTGCCAGCGAAAGAAAAACCACACCTGTGTCCCATATGTAATAAATGTTATGCACAGAAATCTTCCCGTGATCGTCATGTTCGAGAGCTACATGAAGAGCCAGGAAAATTTGGTTGTGACCAGTGTGAGTTAAGATTTTCTAATCAATTTAATTTACGTACGCATCAAAAAAGAATCCATAGCCCTGAAGTTGTCGATAAAACTAGCGGTGCCTTAAAATGTCCCCACTGCTGTCGTTTATTTAAAAAACAGGCTTCCCTAAACAACCACATAACTACGAAGCATATAGACAAACAGAAATCAGCCACAACTAATGCAACGTTGTTGCAATCAGAAAATGAACCACAAATTCTAGCTGAAAATGTAATGGAGCAGCTAAAGCTACTGCAGAGGGCCATAACAGATGACAAATCCGAAATTACCGCAATAGATGATGCCGAAGTGGCAGATGTTTTGATCAAGGATCGTCTAAATCCCTGTGGTTATGTAACAGAATATAAAATACAACGTATCAAAAGGGCAGATGGATTTAAGTACTACGTTTGTGAATTTTGTAGTAAAGAGTTTCGAAAATCTAGCGGATATTTAAGGCACCGTCGTATCCACACAAAAGTGCGCCCTTATATCTGTGTTGTTTGCAAGAAATcttttcccacacaaaatgagctGAAACGTCattgttccatacatattttGGATGAgaatgaaaaattatataaatgtcCAAAATGCTCGGACGGATTTAAGACAATAAGTACATTCGATAAACATCTGAGTTCACACATACCACATTGTCACATCGCTTTTAATTGCAAACAGTGTCCTAAATCCTTTTCATCTTTGAAAATGTATTTCGATCATAATCATAATAAAGTCTTGGTTCCCGAAATGGATATGTTAAAATCACTGCTGCCCTCACCCTTATGTGTCGTCGAAGGCGAGGAGGTAGATTACTTGGTTTGCGAGGAGAAGAAACAAACGAAAGATtttaaatgttccatttgtgataTGACACTAATCTCATTGATGACCCTGAAACAACATGAAAAACGTCATAACACTTTGTGGAAATATCAGTGCCATCTATGCAAAAGATTTTATGCTTCTAGATTGTCCTTAAGCATACACACTAGAACGCATCAAAGCAAACGTAACTTCAAGTGTCTCGAATGCAATAAAATATTCCAAAGGAAATACGAGCTAAAACGTCATAATGCAACGCAACATAACAATTCAAAGAGAAACTATAAGTGTCGTTACTGCCAAAAACTATTTAAAACCAAACAATATTGTCGTAGTCATATGATGACCCATATACAACAGTTAATACAAACAAATGAGGCAAATGAACAAACCGAAACGAATGTGGCTTCCATACAAACACTTGTGCAAAATAATCCTCAAAGGGAAATAAttataaaagaaattaaaattcctaaaaaaccCAAAAAGAATGCACATGCTCTTGAACCCGTACCGGAGGATAAGGATGATCTTAGCCAACGTTACTCCTGCCTAGAGTGTCCTCAAAAGTTTCCTTATCATGCTTGGCTTAAGAAACATATGGCAGAAAAGCATTCCAAGAAAAATCCCTACGCATGTGAAGTTTGCcacaaaacattttcaaaaatgcagTCTTTGAAACGACACAGTTTAACCCACCAAGACACGGAAGTCAAAAACAAAAGCAAAGTCACTTGTCAAGTATGTGGTAAGTTATATtcgaataaaaaaacattaaatttacaCCTGCGACTACACACCGAGGAGCGACCGTTTAAGTGTGaaataaatttgtgtgaaaaatcCTTTAGAACATCTGGGCATTTGATAGAGCATCAGAAATCAAATCATAAATAA
- Protein Sequence
- MATVEILSDIRLPPHFCIICKLQIESDIDLRQHYYEEHQVNFFVDSSYAEEEILQVNESQGEQEKKLLLQNKTKQRKRKTDGVPAKEKPHLCPICNKCYAQKSSRDRHVRELHEEPGKFGCDQCELRFSNQFNLRTHQKRIHSPEVVDKTSGALKCPHCCRLFKKQASLNNHITTKHIDKQKSATTNATLLQSENEPQILAENVMEQLKLLQRAITDDKSEITAIDDAEVADVLIKDRLNPCGYVTEYKIQRIKRADGFKYYVCEFCSKEFRKSSGYLRHRRIHTKVRPYICVVCKKSFPTQNELKRHCSIHILDENEKLYKCPKCSDGFKTISTFDKHLSSHIPHCHIAFNCKQCPKSFSSLKMYFDHNHNKVLVPEMDMLKSLLPSPLCVVEGEEVDYLVCEEKKQTKDFKCSICDMTLISLMTLKQHEKRHNTLWKYQCHLCKRFYASRLSLSIHTRTHQSKRNFKCLECNKIFQRKYELKRHNATQHNNSKRNYKCRYCQKLFKTKQYCRSHMMTHIQQLIQTNEANEQTETNVASIQTLVQNNPQREIIIKEIKIPKKPKKNAHALEPVPEDKDDLSQRYSCLECPQKFPYHAWLKKHMAEKHSKKNPYACEVCHKTFSKMQSLKRHSLTHQDTEVKNKSKVTCQVCGKLYSNKKTLNLHLRLHTEERPFKCEINLCEKSFRTSGHLIEHQKSNHK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -