Ecya033151.1
Basic Information
- Insect
- Eudasyphora cyanicolor
- Gene Symbol
- -
- Assembly
- GCA_963930755.1
- Location
- OZ005736.1:277385604-277389812[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.01 1.2 11.3 4.7 1 20 198 217 198 219 0.93 2 13 0.00014 0.016 17.2 0.3 1 23 315 337 315 337 0.97 3 13 3e-05 0.0034 19.3 1.3 1 23 343 365 343 365 0.98 4 13 1.4e-05 0.0016 20.4 0.6 1 23 375 397 375 397 0.98 5 13 0.089 10 8.4 0.4 3 23 408 430 406 430 0.92 6 13 0.0088 1 11.6 4.1 2 23 438 460 437 460 0.95 7 13 9.2e-07 0.0001 24.1 1.1 3 23 468 488 466 488 0.97 8 13 8.6e-07 9.8e-05 24.2 0.7 1 23 494 516 494 516 0.95 9 13 0.0013 0.15 14.2 1.2 1 23 522 544 522 544 0.98 10 13 1.2e-05 0.0013 20.6 1.8 1 23 550 572 545 572 0.98 11 13 1.5e-06 0.00018 23.4 3.6 1 23 578 600 578 600 0.99 12 13 0.0001 0.011 17.7 0.2 1 23 606 628 606 628 0.99 13 13 1.9e-05 0.0022 19.9 0.3 1 23 634 656 634 656 0.94
Sequence Information
- Coding Sequence
- ATGTCTCCGGACATAGTTCAGACTTCCAGCTGTCGCACTTGCTTGAGTCAGGATACCAAATATCAACTTTCCGATAGCGTAGAGGAGGAGAATGTAATTTTGGATATGTTAAATGGACTGGTGCCGCAGATACACATCGCAGAGCAGAGTCACTTCACCCATTGTATATGCCAAATATGTGTGGATAAATTGCTGATAGGCTATAAGTTCCAACAGTTGTGTATTGAAACTGATAAGCGGCTACATTGTCTAAAGGATAAACTGTTGTGCGGCGCCCCAATTGAGAATGACTTGGAAGCACAACAAATGTGGGATGATCCTTTAAGGGAGGAGGAACAAGTTTCAGTTATGAAATTGGAATTAGATGATGTTGAGAGTAATGGATGTGGTGTAACTGCCGATAATGTGGAAGTAATAATGAAATGTGACAATGATGTGGAGACTGATGCTGGCGTTGGGGGCGAAGGAGAAACTTTAGGAAGTGATACAGATTCTAGcAATGAAAAACTAAGTGTTCTGCGGGAAAGAAAGTTGCGAATATCAAAGAGAATTGGTAAATCTGGAAGtaaaaaaacttcaaatggaactGTTCATCCTTGCAAAGATTGTAATAAAATATTCCGGAGCATGTCACGTTTAAAGAGTCACCACTGTGATCGATTGGAGGAAACAATGGAAAGAACGCGAAGATCTAAGCACAGAGACAGAGAAAAAAAGTTCTCAAATTTAGATAAAGTTCCCCAAAAAGAACTGGCTATAGATAACAACGTAGTATTGTCGCCACAAAGATTTGTAGACGATTTGGAACCATCATGCGATGGAAACGACTACAAAGATGTCTTAGATTTGGGCTATGAAGCATCATCTACGGAGAAAGTTACGCAGACAACAAAAGCAGCAGATATGTTACCCAAAGAAAAACCAAACAAAAATCTCGGCATATTTCCCTGTGATGTTTGTGATATGGTTTTCGACAGAGCATTTCGCCTAAAACGTCATCGTTCAGTACATTCCACTGATAAGCCGTATGCATGTGAAATTTGTAACCGCCGCTTCTTTTCAGCCAAATATTTAAAAGTTCATCAAATGAAGCATATAAATCAGCAATTGTCGACGGATGATTTTCCTTGCCCCTACTGTCCAAGTCGATTCGATAATCTATCATCGCTGAAGATCCATCGTAAGACACACAAAAAGACTCATCTCTCGAAAAGTGATATCTGTGAAATTTGCAAAGACTCCTCCTTCAGGACTACAAAATCTCTAATACAACATATAAAGAGTGAACATCCTGAAGCAGAAAAGCAACAGGTCTGTGATCACTGCCAAGAGTCATTCTTTCTGCACAGTCAACTGGCGAAGCATCTAAAGCAGCGTCATAAAGATAatagaaacttattttgcaatatttgtgAGAAGGACTTCAAATATAAAAGTGCTTTAGAGAAACACATGCGTAGTCACAATGGAGAAAGACCCTATCTTTGTCCGCAATGCGGCAAAACGTTTCGAAGTTCAAGCAATTTAAGTGAACACGTTACGCGGCATTCTGGTCTTCCAAATTACCCCTGTCCCGAGTGTCCCAGACGTTTCAAGTGTGGCTCTGACCTTAGAAAACACGCGACCACTCATTCGAACTTGAAAAAACATGTCTGTGATATTTGTGGATTCCGTTTTACCAGAGCATACTCACTACAGGAACATAAGAGACTGCACACGGGCGAGAGACCTTTTAAATGCGAACAGTGTGGGAAAAGTTTCGCTATCCTCTACCACCTAAAACGTCACACGCGAACGCATACCGGGGAAAAGCCCTATAAATGTACATACTGCGAAAGAGCTTATGCTGTGGGCGGAGATTTGACCAAACACTTGAGAATCCATTTGGGAGAGAAGACCTACTTGTGTACCGAATGTCCTCAGGCTTTTAAATACAATTCGGAATTGCGTAAACATCTTATAGAGCATTATAAAATGAGTAAAAGTCAAGCAAGCGAGAAGCAACAGGATGAAAAGATTGTAGAGGCAGAGGAAGATGAAAAACTTGAAACCAGAACAACGACATAA
- Protein Sequence
- MSPDIVQTSSCRTCLSQDTKYQLSDSVEEENVILDMLNGLVPQIHIAEQSHFTHCICQICVDKLLIGYKFQQLCIETDKRLHCLKDKLLCGAPIENDLEAQQMWDDPLREEEQVSVMKLELDDVESNGCGVTADNVEVIMKCDNDVETDAGVGGEGETLGSDTDSSNEKLSVLRERKLRISKRIGKSGSKKTSNGTVHPCKDCNKIFRSMSRLKSHHCDRLEETMERTRRSKHRDREKKFSNLDKVPQKELAIDNNVVLSPQRFVDDLEPSCDGNDYKDVLDLGYEASSTEKVTQTTKAADMLPKEKPNKNLGIFPCDVCDMVFDRAFRLKRHRSVHSTDKPYACEICNRRFFSAKYLKVHQMKHINQQLSTDDFPCPYCPSRFDNLSSLKIHRKTHKKTHLSKSDICEICKDSSFRTTKSLIQHIKSEHPEAEKQQVCDHCQESFFLHSQLAKHLKQRHKDNRNLFCNICEKDFKYKSALEKHMRSHNGERPYLCPQCGKTFRSSSNLSEHVTRHSGLPNYPCPECPRRFKCGSDLRKHATTHSNLKKHVCDICGFRFTRAYSLQEHKRLHTGERPFKCEQCGKSFAILYHLKRHTRTHTGEKPYKCTYCERAYAVGGDLTKHLRIHLGEKTYLCTECPQAFKYNSELRKHLIEHYKMSKSQASEKQQDEKIVEAEEDEKLETRTTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00679795;
- 90% Identity
- iTF_00679795;
- 80% Identity
- -