Ecya032379.1
Basic Information
- Insect
- Eudasyphora cyanicolor
- Gene Symbol
- -
- Assembly
- GCA_963930755.1
- Location
- OZ005736.1:259963271-259967080[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.011 1.2 11.3 0.8 1 23 134 157 134 157 0.96 2 13 0.0002 0.023 16.7 1.6 2 23 163 185 162 185 0.97 3 13 1e-05 0.0011 20.8 5.6 1 23 194 217 194 217 0.95 4 13 3.6e-06 0.00041 22.2 4.3 2 23 477 498 477 498 0.98 5 13 1.8e-05 0.002 20.0 3.5 1 23 504 527 504 527 0.96 6 13 4.2e-05 0.0048 18.9 1.7 1 23 532 555 532 555 0.98 7 13 1.4e-05 0.0016 20.4 1.5 1 23 566 588 566 588 0.97 8 13 0.0013 0.15 14.1 3.7 1 23 593 616 593 616 0.96 9 13 6e-05 0.0068 18.4 0.8 1 23 622 644 622 644 0.96 10 13 3.8e-05 0.0043 19.0 1.8 1 23 650 672 650 672 0.98 11 13 9.5e-07 0.00011 24.1 1.6 3 23 680 700 679 700 0.99 12 13 9.5e-07 0.00011 24.1 0.3 1 23 706 728 706 728 0.99 13 13 0.0014 0.16 14.1 0.2 1 23 733 756 733 756 0.98
Sequence Information
- Coding Sequence
- ATGGAGGACTACAATACGAATTCCATCTGCCGCATTTGTCTTCAGGCCAACATGAACTTATCAAATATATTCGATCAAATTCAATCATCGGGAGGAGGAGGCGATATCAATACTGCAGCGCAAATCATCACCGAATGCACTAAATACCCAGTTATCCGCAATGATAAGCTGCCCACAAATATATGCATAGCATGTCTGGGAGCGGCTCGCAGCGCCCATAGTTTTAAGCGAAAGACCGAAGAGGCGTATTGTCGCCTAAAAGCATTGTATGATATAACCTGGATTAATAAGGAGGAGAATAAAAAGAGTGAGCCGCCCACCTCCAACATCACCACTACTGCTGTTGCTAGCAGTGGTAGTGTCGCAGATAAGTATACACAAACTGAGAAGAGCACGGTATTCCAGTGTGAGTCCTGTCCACAAAAGTTTTTTGCCGAAAGTGAATTGCGACAACATCGGGCCAAAACTCATGTCTATGATGGTAAAAAGTGTCGAGTTTGTGGCGAAAAATTCAATCATCTTGGTCAACTGAAAGTTCACCTGTCCACGGAACATCCCAACGAAGGTATACGATGTGATTTCAAGTGTCATGTTTGCCAGAGAGAATTTACGCGAAAGGATCACTTAAAACGACATCTGGTTAAAGTCCATAAAATTGAGGATGAAAATCTAAATATTTCAAAGGTATCCCTTGATGAACCTGAAATACAAATCGACAATCAAGACTCCTCCCTCCCAATTGATCTGAACAATTACAGTAGTCATTGGCCTGATTATCAGGATGAAGAAGATGAGCCCGAAGCTGCAGCAACCCAAGAAGAGAATATCGCAGCCACTAATCCATTCTCAAGTGACGAAGAAACAACAGAACATCACAATTTCAACAATATGGACGAAGAAGACGTTAAACATTTTGTTGATACTTTAGCACAACCGGAAATTTCCATAAAAGTTGAAAAAGTCGACTATAATGACAGCAATTCACCTGATAAGAAGCCTCCAAAACTACATGAAGACAATTCAATGGAAGAAAACAACATTAAAGTTCCACCTCTGAAACCCGAAGGAACCGTCGAAGAATATGAAGAAAAAATTGAACCGGGTGAAATTAGCGACGATAACTTCCATGATGAATATCACAGTGATGACCATAGCAGTGAAGAGGAGGAAAGAGACATAACCTACACAGATAATGAAGCTGAAGGGCAGCAAGGGGACAAAAACTACACAGACAATGAAGACGAAGAGGATGATGAGGAGGAGGAGAAAGATGAGGATGCTGACTTCAAACCAATATTAACGTCCTCAGATGTAAAAAGAGCAGATACTAAGAAATCACGAAAAGAAATCCCCGCTTGTTCCTCATCCTCTTCGGTAAAGGTAAGAAGGCCTCGTCGCCGTCATGGTTCCTCGAAAACAGAAGATAATCGTTGCAAAGAATGTGATCGCACCTTCTCGCGGTATAACCACCTGTTGCGACATATGCTGACACATAGCTCTGAAAAACCACACGTCTGCAAATTCTGCTCTAAGGGATTCTCGCGTTCCGATCACTTAGCAAAGCATATACAAAGCATACATTGTGAAAAGAATTATAAGTGTGAACAGTGTGACAGCGCATATGGGCGCAAAGATCACCTACAGCGTCATATAGAAACTCGGCATAACAAAAATCCATCCGCCCCAAAACCACAATACGAATGCGATGTGTGCGAGAAGAAATTCACCACCAAAACCTATTTAATAAGGCACAAACTATTGCATACAGATCGTCTGTACGCCTGCAAACACTGTTCCGAAACTTTCACTGAGAAGGAGCAAATGAAGGAGCACCAGAAACAAAAGCACACACAGCCCCGCAATTTCCTCTGTAGCATCTGCGGGGACTCTTTTCAGCGTAATGAATATCTTAAGATTCATATGAGACGTCATACTGGGGAAAAACCTTACAAGTGTCGGTACTGTGAGAAGGGATTTCCTCGAAGCACGGATTTAAAAATGCACGAAAGatatcATATAGGTCTTAAGCCGAATCTTTGCAATTTGTGTGGCAAAGGTTTCCATCGTCCTTACAATCTTACCATTCACATGCGTACCCATACGGGAGAGAAGCCGTATAGATGTAATCAGTGTCCTCAAGCGTTTGCTCAGAGTAATGACTTGAAGGCTCACATTAGGCGGCATACTGGCGAACGTTTCCGCTGTGATGAGTGTAGCGCTGCCTTTTTGCAACGTTATGGTCTAAATGCCCATTTAAGAACAGTACATGGTATTGTGGTTACATCTTTTACCGGTCGTTTACGTAAAGCTGATCAGACTGGAGATGATACGGAAGCAAcggggaaaaatattttaaccgGGGACGAGGAACAACAGATACCAGGGACCGAACATgtgcaacaaaacgccgataactcAACCACCACCACAACATCACCTATGTATTTGGGCCCACTTCTTTTAAATCCCATACCTATGAGTTCGGCAGCAGGGGCAACGTCCATAGATGGCACGCTTCTACCGCCTCCACATCCAACGCCTACACAACTGTAA
- Protein Sequence
- MEDYNTNSICRICLQANMNLSNIFDQIQSSGGGGDINTAAQIITECTKYPVIRNDKLPTNICIACLGAARSAHSFKRKTEEAYCRLKALYDITWINKEENKKSEPPTSNITTTAVASSGSVADKYTQTEKSTVFQCESCPQKFFAESELRQHRAKTHVYDGKKCRVCGEKFNHLGQLKVHLSTEHPNEGIRCDFKCHVCQREFTRKDHLKRHLVKVHKIEDENLNISKVSLDEPEIQIDNQDSSLPIDLNNYSSHWPDYQDEEDEPEAAATQEENIAATNPFSSDEETTEHHNFNNMDEEDVKHFVDTLAQPEISIKVEKVDYNDSNSPDKKPPKLHEDNSMEENNIKVPPLKPEGTVEEYEEKIEPGEISDDNFHDEYHSDDHSSEEEERDITYTDNEAEGQQGDKNYTDNEDEEDDEEEEKDEDADFKPILTSSDVKRADTKKSRKEIPACSSSSSVKVRRPRRRHGSSKTEDNRCKECDRTFSRYNHLLRHMLTHSSEKPHVCKFCSKGFSRSDHLAKHIQSIHCEKNYKCEQCDSAYGRKDHLQRHIETRHNKNPSAPKPQYECDVCEKKFTTKTYLIRHKLLHTDRLYACKHCSETFTEKEQMKEHQKQKHTQPRNFLCSICGDSFQRNEYLKIHMRRHTGEKPYKCRYCEKGFPRSTDLKMHERYHIGLKPNLCNLCGKGFHRPYNLTIHMRTHTGEKPYRCNQCPQAFAQSNDLKAHIRRHTGERFRCDECSAAFLQRYGLNAHLRTVHGIVVTSFTGRLRKADQTGDDTEATGKNILTGDEEQQIPGTEHVQQNADNSTTTTTSPMYLGPLLLNPIPMSSAAGATSIDGTLLPPPHPTPTQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -