Basic Information

Gene Symbol
-
Assembly
GCA_963930755.1
Location
OZ005736.1:276749191-276754878[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.082 88 4.8 0.6 3 29 36 67 34 81 0.80
2 11 0.027 29 6.4 0.0 14 32 192 210 179 214 0.86
3 11 3 3.2e+03 -0.1 0.5 18 27 422 431 403 446 0.73
4 11 0.42 4.5e+02 2.6 0.4 3 27 502 531 500 544 0.78
5 11 0.0093 10 7.9 0.1 2 38 598 640 597 641 0.89
6 11 8.1e-05 0.088 14.5 0.1 11 38 745 778 735 779 0.81
7 11 0.24 2.6e+02 3.4 0.1 17 33 1017 1033 1001 1039 0.88
8 11 3.8 4e+03 -0.5 0.0 18 32 1231 1245 1213 1250 0.77
9 11 0.00059 0.63 11.7 0.1 3 38 1306 1348 1304 1348 0.77
10 11 0.0044 4.8 8.9 0.1 1 38 1401 1444 1401 1444 0.90
11 11 0.13 1.4e+02 4.2 0.0 14 33 1529 1548 1520 1551 0.83

Sequence Information

Coding Sequence
ATGCCTTCTCAACGCGATGTAGAAGAGAAGATTAAATCAGAAATAGGCAACAAAGTAAAAGCCGGCATTCTCAAGTTGGCAAAGAATCATACTAATAAACGATTGGTATGGAAAGTTTTTGATTTGATTCGATCTACAAATGGACGCATAGTTGAAAATTACGCTTGCTGCTCTAtatgtgaaaatatattaaaaagctCTTTCGCGAAACCCGCTCTTCTACGTAATCACAATTGCTATATACAGTTTGTACGTGAAACAAAGGTGGAAGTGGATGGTTATAATTCCAACACAATTTTGGAAAAGGAAACTACAGAGGATATTGGAAAAGAAATCTCAAAGAACCGGAAATCTACTACAAAATCTGAAGAAAATGACTCAAAGGCGGCGGAAATGGATACATTAACCGATGATAGCACAGAAGATACAAACAGTTCATTGCCCGAACAAATGAATGTATACAATGAGGCCAATAGTATTCAAGATATTGATAAATATTGTTCGTATGACGACAATGACCCAATATGGTTAAGATTTAAACTTATATCGCTTGATGATGGATCCAATTCGGGTGAAAGGGTGGTTAGCTGCCGTCACTGTAAAATGATCCTAAAATACAATGTTGCAACTAAAGTTCAACTGGACCAACATAAATGTTTTCCCAATGCCTATATAGATAATCCAAAACCCATCAGAGAAAAAGATGTAGAAAATACAATGAAAATTGAAGTCGACGACGACAGCTATTCGATATGTGTGAAAGAAGAATACAATTATGGCAACTTAAGAGAACATTTCCCCAATGAAACATTATTACAAACTACCGAAAACGATGAAGTATATCAAAAACTTGTGGAAGCATGCAACGATGATACTGATTCTAATGAAGCTAGAGAAATGCTCAATGTTATCTATATTAAAAACGAAACGGAAGTAAGAGAAGATAGTAAAACTAATGCTGATGATGCTGGAACCCAAACGGAAGAcacattttcagaaaatataagaTATGCCGATAAAAAAGTTGAAAAAGGAAATGGTTGTGCTGAATTTGAAAATGCCACTGTTACAGAAATGCTAAATACTAGTGAGGGCATTGAACTCAATGAACGCCACGCTTCTCGTGGGCTGGAACAAGACAACACAATTACAGCCTCAGGGTCCAAAGAGCTATTAGAAGTAGAAAAGCATAGTAGTATTCTTGCAAATCCAGTATGGCAAATATTTGCTTTAGTCTTCACAAACGAAGGCAAGCCAGAGCTGTCCTGTCGCCTGTGTAAAAATGTATTGGAATGCGATTATAAGTCTAAACTCTATGTAAAAGAACACAAGTGTTTAAGTGCGGATAAAAgATGCTATCAACAATTTTTACGTCTAAGAAAGGATGAACTGAAGGGCAATAATTCCTTAGCTTCCAGTAAAGAGCAGAATGAAAAAgatgttgaaaataaaataaaatcgggCGTTTATAAAATGGAACATAGCAAAGTGACTACAAATCCCATATGGACACAATTTTCGCTTATTTCAAAGTCGGATGGTACGCTTATCAAAGAAATGGTCTGTTGTCGCCTTTGTAAAGTGGTACTGAAATGCAATGACCAAAATAGCGAAGAATATTTGCAACAACACAAATGTTTGCAGTTGGAAGAAAGCTCAGAGAACAGaaaaaatatcagCAAATTAACTGAAAAGGAATTAAGAACGGAAATGGATAAAAGAAAATCAGAAATAAAGTCCAATATAACCGCAGGTGTTTATACATTGCATATGAATCCAGATGGCAAAAGTTTGGCATGGAAAATATTTGCTAGAATAAAAGCTGCAGATGACACACTTATTGATGATTACGttttttgcaccaaatgtaaacACATATCAACATATGACGGCCATAGAACAGGCAATCTAACACGCCATCCGTGTTTGAATAAGTCAAGTCTTCGCCGCAAACCCTCAGCATTGAATAACGATGTGGAACTGGAATGGGAAACCGCCAACAAACGATCCACAACTAATGTCTGTGAAGTAGAAGAAGAAAACGAAACTAAAACACCTAGCACGGAGCAGATGGGTGAAAACTCAAGGACTGACTTCAGGAAATTTACCACCAAGTCAGTAGAAATTGATAAgagaaaattggaaataaaatcGAATATATCCGCAGGCGTTTATACATTGCGTATGAATCCAGATGGCAAAAGTTTGGCATGGACAATTTTTGCTCGAATTATAGATGCAGATGACACACTTATTGAAGATTATGTTATCTGTACTAAATGTAAGCAAATATCGTCATATGATCGCCATAGAACAACAAATCTAACACGTCATCCGTGTTTGAACAAGTCAAGACTTTGCAACGAAGCCTCAGTATTGAAGACCGAAAATCACAACAAAATAGCCACAGATGCGTCCAATATGTATCTGCACATTAATAAATGTCCAAAGAAAATAACTGCTAAAAGCTCTAAGGAATCAGAACCAGAAGAAACCAAAACAGAAatacataacaaattaaaaacaggaGTTTATAAAATGGTGTTGAAAGAATCTAATAATATAGCTATATGGGAAAAATTTGCTATGGTTAGCAAAGCGGATGGCAGCATTCTTGATGGTTACTATTGCTGCATCAAATGTCTAAAGTTATTTCGAGTCTATAATATTTATCTGAGCAGTTTATACCGGCACGTGAAATCATGTGAAATTGAATTGCAACAAAATCCTCAGCAAGAAATGGAAAATaacattaaaagaaaaataaggaACAACTTACagaaaagaacaaaaacaaaatctaATACAAAAACTCGCAACGAAGAAGAACACATCCAACATGGCTCTCATGAGTTGAAAGATGGCACCGATACAACAGAAATGGATACATTAACGGATAATAGCAAAGAAGATACAAACAGTTCATTGAATGTATACAATGAGGCCAAAAGTATTCAAAATATTGATGAACATTGTTCTTATGATTCAAAATGGCAAAGATTTAAACTTATATCGCGAGATGATGGATCCACTGCGGGTGGAGCGACGGTTAGCTGTCGCCAGTGTAATATGATCATAAAATACAATAGTACAACTAAAGATCAACTCGAGCAACACCAATGTTTTCCCAAGGCCCATATAGATGATCCTAGACCCATCAGAAAAAAAGCAAtggaaaatacagtgaaaaatgaaaTCGATGACAGCTATTCGTTCTGTTGTGTTAAAGAAGAATACAATTATAGCAATTCCCCCAATCAATCGGAATTCACATTACAAAGAATTTCCTCTAACGAAACATTACAAACCACCGTAAACGATAAAGAATATCAAAGACTTGTGGGAACATGTAGCGACACTTATTCCAAAGAAGCTAGAGAGTGGTCCAATGCCACCTATATTAAAAAGGAAATGGAGGCAATTGAAGATATTAAATCAAATATTGATATTGAAGACCAAACGGAAGTGGAGACATGTTCTGAAAATACACAACAAACTGTTCCAGAAAAACTAAATACTAGTGAAGGAATTGAAGCCTGCGAAGTCGACTCGGATGAGTGGCAAGAAAACGACATAAGTACAGCATCAGATGACGATGAGAGGTTACAAGTAGATAAGGGTAGTACTCCTTCAAATCCTATATGGGAAATATTTGCTCTCGTCTTGAGGGATGAAGGCAAGCCAGAGCTGTCCTGCCGCCTATGTAAAATGGTATTAGAATACAATTACAAGTCCAAAAACTATGTTAAGGAACACAGATGTTTAAGTGCGGATAAAagAAAAGGTAAAATGGATGACAACAATTCGTTTGCCGCATGGGAAGAGGAAACTACGGCGGAGTATGAAAAAgatgttgaaaataaaataaatttgggcaTTTATAAAATGAAACATAGTAAAGTGACTACAAATCCCATATGGACACAATTTTCGCTTATTTCAAAGTCGGATGGTACGCTGATAAAGGAAATGGTCTGTTGTCGCCTTTGTAAAGCGGTATTGAAATACAGTGGCCAAAGTAGCGAAGATAATCTGCAACAACACAAATGTTTGACGCTGGAAGAAAGCTCAAGAACCAGgAAATATACCACCAAGTTAGTTGAAAAGGAATTAAGAACGGAAATGGATAatagaaaattagaaataatatcAAATATATCCGCCGGCGTTTATTCACTATTTATAAATCCAGATGGCAAAAGTGTGGCATGGAAAATTTTTGCTCGAATTAAAGATGCAGATGACACACTTATTGAGGATTACGttttttgcaccaaatgtaaGCAAATATCAACATATGATGGCCACAGAACAGGCAATTTAACGCGCCATCCATGTGTGAAGAACCCAAGTCGTCGCAAAGAACCCTCAGCACTGTCTACCGAAACCGCAAACAAAAAGCGATCAATGAATGTCAATAAGAATGACAGCGTATGTAGAACTAAAAGACCTAGAATGGTGGACAATGACAGCAATGAAGATGAAAATATTCCCAATAATGATGATGAACTTTTGCATGCCGCCACTAATGATCCAATATGGCTAAGATTTGAACTTTTTACAATGGATGATGGCTCAACTGTGGACAGAGTGGTTAGCTGTCGTCAGTGTAAAATAATCTTAAAATACGATGGTACAACAAAATTGCAGCTGGAACAGCACAAATGCTTTTCGAAGGCCTCATTGCCAACTAATGCTAAAACCATAGAAAAGGAAATTAATGAAATCGACAACTGTTATTCGATCTGTGTGAAAGAGGAATACATATTagattag
Protein Sequence
MPSQRDVEEKIKSEIGNKVKAGILKLAKNHTNKRLVWKVFDLIRSTNGRIVENYACCSICENILKSSFAKPALLRNHNCYIQFVRETKVEVDGYNSNTILEKETTEDIGKEISKNRKSTTKSEENDSKAAEMDTLTDDSTEDTNSSLPEQMNVYNEANSIQDIDKYCSYDDNDPIWLRFKLISLDDGSNSGERVVSCRHCKMILKYNVATKVQLDQHKCFPNAYIDNPKPIREKDVENTMKIEVDDDSYSICVKEEYNYGNLREHFPNETLLQTTENDEVYQKLVEACNDDTDSNEAREMLNVIYIKNETEVREDSKTNADDAGTQTEDTFSENIRYADKKVEKGNGCAEFENATVTEMLNTSEGIELNERHASRGLEQDNTITASGSKELLEVEKHSSILANPVWQIFALVFTNEGKPELSCRLCKNVLECDYKSKLYVKEHKCLSADKRCYQQFLRLRKDELKGNNSLASSKEQNEKDVENKIKSGVYKMEHSKVTTNPIWTQFSLISKSDGTLIKEMVCCRLCKVVLKCNDQNSEEYLQQHKCLQLEESSENRKNISKLTEKELRTEMDKRKSEIKSNITAGVYTLHMNPDGKSLAWKIFARIKAADDTLIDDYVFCTKCKHISTYDGHRTGNLTRHPCLNKSSLRRKPSALNNDVELEWETANKRSTTNVCEVEEENETKTPSTEQMGENSRTDFRKFTTKSVEIDKRKLEIKSNISAGVYTLRMNPDGKSLAWTIFARIIDADDTLIEDYVICTKCKQISSYDRHRTTNLTRHPCLNKSRLCNEASVLKTENHNKIATDASNMYLHINKCPKKITAKSSKESEPEETKTEIHNKLKTGVYKMVLKESNNIAIWEKFAMVSKADGSILDGYYCCIKCLKLFRVYNIYLSSLYRHVKSCEIELQQNPQQEMENNIKRKIRNNLQKRTKTKSNTKTRNEEEHIQHGSHELKDGTDTTEMDTLTDNSKEDTNSSLNVYNEAKSIQNIDEHCSYDSKWQRFKLISRDDGSTAGGATVSCRQCNMIIKYNSTTKDQLEQHQCFPKAHIDDPRPIRKKAMENTVKNEIDDSYSFCCVKEEYNYSNSPNQSEFTLQRISSNETLQTTVNDKEYQRLVGTCSDTYSKEAREWSNATYIKKEMEAIEDIKSNIDIEDQTEVETCSENTQQTVPEKLNTSEGIEACEVDSDEWQENDISTASDDDERLQVDKGSTPSNPIWEIFALVLRDEGKPELSCRLCKMVLEYNYKSKNYVKEHRCLSADKRKGKMDDNNSFAAWEEETTAEYEKDVENKINLGIYKMKHSKVTTNPIWTQFSLISKSDGTLIKEMVCCRLCKAVLKYSGQSSEDNLQQHKCLTLEESSRTRKYTTKLVEKELRTEMDNRKLEIISNISAGVYSLFINPDGKSVAWKIFARIKDADDTLIEDYVFCTKCKQISTYDGHRTGNLTRHPCVKNPSRRKEPSALSTETANKKRSMNVNKNDSVCRTKRPRMVDNDSNEDENIPNNDDELLHAATNDPIWLRFELFTMDDGSTVDRVVSCRQCKIILKYDGTTKLQLEQHKCFSKASLPTNAKTIEKEINEIDNCYSICVKEEYILD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-