Basic Information

Gene Symbol
basR
Assembly
GCA_963930755.1
Location
OZ005734.1:67765019-67767455[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.45 1.3e+03 1.1 0.1 10 43 169 208 168 211 0.73
2 6 7.6e-11 2.3e-07 32.4 0.2 1 45 217 262 217 263 0.95
3 6 4e-06 0.012 17.3 0.0 2 42 272 316 271 320 0.85
4 6 2.7e-13 8.1e-10 40.3 0.0 1 46 326 372 326 372 0.93
5 6 4.1e-07 0.0012 20.5 0.1 2 43 379 421 378 423 0.93
6 6 9.1 2.7e+04 -3.0 0.5 3 11 453 461 452 461 0.86

Sequence Information

Coding Sequence
ATGGAAGAGGATGCCATGGACGACGCATCAATGGACAGCCCGGTCCGGTCCATGTATGCTAGAACGAACCTGGAAAATGCTTTAACATTGAATCGGCAGATGCAACTGCAGTTGCTTACGGTGCGCGATAAAATCGAGAAACTCTTGAAAAACGTCAAAGAGATCTACGAAGGAAACGAGGACCTCATGCGCAACCATCTAATGAAGCAGAAGAGGAAAGGATTTGGAATGCGAGGAGCCTATCTGAAAGGCGGCACATTTTACTTAAAGGGTAATATGTTTTTCAAGGACTTCGACTGTCGCAACTGCCCGGACAATCCTGATTATAAGGCAAGAGTAAATGAAGGTGAGATGTTTCCTATGGATCTTGATCTGAAAGGAAGGCACGTGTGGTCGCTCAAAGACAAGAAGGGGGTAGTGGAGGGTATCAAAGAACAAATAATCGAACATTTGAGAACATTTGGCAAGTCATCGGAATTGCAGACAACCAGGGAAATTAATAGCGAAAAACTGGCAAAGTTGTTACAAATGGTCTCCAGTGACTTTCGCATCGATTGGGATGTTATTTCCAAACATAATTTACAGCATCGACATTCGATCAAAAGTTGCGAAGCCATTTGGAATGTATTTCTACATCCTTCATTAAAACGTTGCAATTGGAGTGAGATGGAGAATCAAAAGCTTTTGGAAGTGTCGAAGAAATATAATTGTCAAAACTGGACTGCTATTGCCAGCGAAATTGGTGGAAGGTCAGACTTTCAGTGCTTTGTACAATATAAAAATTATGTCATTTATATGATGCCAGAAAAGGCTGGCAAATGGTCAAAAGAAGATGACGAACGTTTAGTAGAAGTCATCGATAGAAATACAATAAACGGTCAAATCAATTGGAGCAATGTTATGGTACACTTTCCGCAAAAACCGCGCACAACACTGCAGTCTCGATACACATATTCACTCAATCCTCAAATTAATCGTAAGCCATTTACACCCGAAGAAGATCTCTTGCTTTTGGCTGCCGTTAAAGAATATGGcacaaaattttcttatattcCACGTACCTTATTCCCCAATCGTACCACCGTTCAGTTACGAACACGTTATAGAAACACTCTGGTGCATCGCCACAAACAGAAATCGTGGACCCTGGAAGATGATACAAAACTTATGGATTTCATTACTGAACATGGCACAAAATCTTGGAAGAAATGTGAAGATGTAGTTATGAGTCATTCTCGTATAAGTTGTCGCACAAGATTTTTGGTTATTTCGAAATATTTCGAACAAAATCCTGGAGCCACTTTAGCCGATATTAAAAGAAAGAGGATGAAGCAATGGAATTATGTTAATACAGAAAATTGGACGGAGAAACTTGATGAACTACGTAATGACCCACAAGCGAAATTGGTCAAGAGAGTATTTAGGAAGCCCGTTAggaaaccaaaaattaaaaaaattaagcaagAAGACGAAGTTGAGAAGAAACCAAAAATTAGAAAGAAAATGGGTAGACCGAAAAAACCACCTGAGCAACGGGCGGCACGACGTAAATTAGATCGCAGGAAAAAGGTGTACATTGAACGTTTACGCACGAATGGTGTCCAGATGTATAACAGTGTTAAATATGCATACGACTATCAGTTGGGGGTAGATCCTTCGACAACTAACAgcgcaaaatttaataaattacccTTTGTTCGAGCGGCACTAAAGCTACAAGATCGTGAAGATCAGAAAAATCATCGCTTCAATGATACTGTACCGGCTGTGTTACGAACCCGTATTACAAAAGCTTTAAAAGGACCAAGAGGCAAAGAAGTACAAGCACCTACTGGATTTTCTTTGCCCACCAGTTGGTCGACAGCCATGGCATTTCGTGCTTTATGTATTCACACAGCACGGCCTGACATAGAGACTGTATCCGCGCCCTCATTTGACGACTCAAATGCACATATTAACTTATTTCGTGAACGCTTACGTACCCTTTTTTACAGTACGGCGTTATTAAGTCGACTGCATCCAAAAATGGTCGGTATAGGTGTGCCGCCAGAACCACCAGCACCATCACCGCCTCCAGAGCCAGAGGTTCCAGAGGTGCCAGAGAACAATGAAAACTCTTTGGAAGCTGAGAAACGTAAAGCTACAGATGAAAATGATAATAAACCAAAACGACCAAAAATCGTTAGCAAATCTGTTGTTGATCAAGTTGTGCTAAgtataaaaagagaaaaaaattcgTAG
Protein Sequence
MEEDAMDDASMDSPVRSMYARTNLENALTLNRQMQLQLLTVRDKIEKLLKNVKEIYEGNEDLMRNHLMKQKRKGFGMRGAYLKGGTFYLKGNMFFKDFDCRNCPDNPDYKARVNEGEMFPMDLDLKGRHVWSLKDKKGVVEGIKEQIIEHLRTFGKSSELQTTREINSEKLAKLLQMVSSDFRIDWDVISKHNLQHRHSIKSCEAIWNVFLHPSLKRCNWSEMENQKLLEVSKKYNCQNWTAIASEIGGRSDFQCFVQYKNYVIYMMPEKAGKWSKEDDERLVEVIDRNTINGQINWSNVMVHFPQKPRTTLQSRYTYSLNPQINRKPFTPEEDLLLLAAVKEYGTKFSYIPRTLFPNRTTVQLRTRYRNTLVHRHKQKSWTLEDDTKLMDFITEHGTKSWKKCEDVVMSHSRISCRTRFLVISKYFEQNPGATLADIKRKRMKQWNYVNTENWTEKLDELRNDPQAKLVKRVFRKPVRKPKIKKIKQEDEVEKKPKIRKKMGRPKKPPEQRAARRKLDRRKKVYIERLRTNGVQMYNSVKYAYDYQLGVDPSTTNSAKFNKLPFVRAALKLQDREDQKNHRFNDTVPAVLRTRITKALKGPRGKEVQAPTGFSLPTSWSTAMAFRALCIHTARPDIETVSAPSFDDSNAHINLFRERLRTLFYSTALLSRLHPKMVGIGVPPEPPAPSPPPEPEVPEVPENNENSLEAEKRKATDENDNKPKRPKIVSKSVVDQVVLSIKREKNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-