Basic Information

Gene Symbol
-
Assembly
GCA_963930755.1
Location
OZ005735.1:239857575-239863217[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.044 3.1e+02 3.4 0.0 52 68 31 47 14 58 0.74
2 3 0.00028 2 10.5 0.0 23 84 143 213 132 216 0.75
3 3 0.0058 41 6.3 0.0 30 82 392 453 374 458 0.64

Sequence Information

Coding Sequence
ATGGATGAACATCGTTTGATCGAAGAAGTGCGCATGAGACCGGCTTTGTGGAACCTGATGGACGCTGGGATCAAATCACGAGGCTTAGCATCCAAATTGTGGAAGGAGGTGGCACAAACACTTAATGTGGATGATGATAATCGGCGTaaacgtcgtcgtcgttgtttaaCGAAAGACGAACACACTGACGATTCTCACTCTCGCAGTATTTCCgagaataaaatagaaaattcgcGCCTCGCCGATGATGACAGACCTTGTTCTTTGGAAAATGATGATGGTGACGATGAAGATTACGATTTAGACTCTGATCAAATGTTGTTGGAGGAAATTCAAAGTATAGCGTCACCTCAGGAGGGAAATCTGGTTGCGGTCGACACACCCGAGGAGTATGTCCCAAATGAAATAGGAAAAAACCCGCAAGTAACACCAGCTTCCCAGACGAACGAAATGGATGTACATCATTTGATCGAAGAAGTGCGCATGAGACCGGCTTTGTGGAACCTGATGGACGCTGGGATCAACTCACGAGGCTTAGCATCGAAATTGTGGAAGGAGGTGGCACAAACACTTAATGTGGATGATGTCGAACGGTGCAAACGTAGATGGACCAATTTGCGTGATACTTACCATGCTCTTGTCAAACGTTTGGCATGCAAAAGGGAAAGAGACCTAGAGCTGGGGATCGAGGAGCCCCTTGCGCATTACACTAGTAGCTGGCCGCATTTTAACGCATTGCATTTTATGAAAGATAATCGGCGTAAACGTCGTCGTCGATGTTTAACGGAAGACGAATACGAACACACTGACGATTCTCAAACTCACAGCATTTCCGAGATTAAAATAGAAAATTCGCGCCTCGCCGATGACGACAAATCTTATTCTTTGGAAAATAATGATGATGGTGACGATGAAGATAACGATTTAGACTCCGATCAAATGTTGTTGGACGGAATTCAAAGTATAGCGTCACCTCAGGAGGGCAATCTGGTTGCGGTCGATACACCCGAGGAGTATGTCCCAAATGAAATAGGAAAAAACCCGCAAATGACACCAGCTTCCCAGACGACAACTTCTTTTCGTTCAAATGTAAGATCTCGACTCTTTAGGTATCGTGGCTGTAGAACGAACATGAGTAACGTCGCGACTTCAGTTGAACGTCATATACCGAACGAAATGGATGTACATCGTTTGATCGAAGAAGTGCGCATGAGACCGGCTTTGTGGAACCTGATGGACGCTAGGATCAAATCACGAGGCTTAACATCGAAAATGTGGAAGGAGGTGGCACAAACACTTAATGTGGATGATGTCGAACGGTGCAAACGTAAATGGGCACATGTGCGTGATAATTACCATGCTCTTGTCAAACGTTTGGCATGCAAAAGGGAAAGAGACCTAGAGCTGGGGATCGAGGAGCCCCTTGCGCATTACACTAGTAGCTGGTCGCATTTTAAcgcattgcattttataaaagacCATCGGCCTAAACGTCGTCGTGGTTTAACGGAAGACGAATGCGAACACACTGACGATTCTCAATCTCATAGTATTTCCGAGATTAAAATAGAAAATACCCGCCTCGCCGATGAGGACAAACCGTATTCTTTGGAAAATGATGATGGTGACGATGAAGATTACGATTTAGACTCTGATGAAATGTTGTTGGAGGAATTTCAAAGTGTAGCGTCACCTCAGAAGTGCAATCTAGTTGCAGTGGATACACTCGAAGAGAATGTCCAAAATGAAAAAGGAAAAAACCCGCAACTCACACAAGCTTCCCAGACGACAACTACTTTTCATTCAAATGTAACATCCGGAAATTCAGAATATCAACTGATGTTTACTCCCCAGTCGTTAATACAACTACCAGCTACTATAAAAGTGGCGAGAATTTCAGTTGGAAACCCCATCGAGGTACACACAACTTCGCTCAAAGTTAACGACCCAAAGGACTTGAAATCCGCCTCCACTAGCGCCATACCCATCACTCATGCCATTAATACAAAGACAAGTTATGAATCAGTGGCTGAAATTTTAACATTACTCAAATACAATGATAATACATGGAAGATCTGTGacCTGTTTCAGGTCATTGGTTTGTTGACTGGTATCCAAGGAcgtttcacaaaatattgttgtttcctTTGTCTATGGGAAAGTCGCGCTAcatgtcatcgttgcgtcagaACAGAGAGGCCAAAAAGAACTGAGAATTCACCAGGAAAACAGAACATTTCAAATCAACCATTAATTGATCCAAATGACGTTCTTCTTCcaccgctgcacataaaattgggcctTTTTAAGAACTTTGTCAAGGCCCTGGATAAAGATGGTAcagcatttaaatatttgttagcgGGTTTTCCTAAAATTTCATATGCTAAACTCAAAAACGGCATATTTGTTGGCCCTCAAATCAGAAAGCTTTTAAATGAtgaaaatttttcacaatgtCTATTGGAGAAAGAATATGCAGCCTGGAAATCTTTCAAGAGCATCGTGAACAGTTTTCTTGGAAACAATAAGCGTAAAAACTACAGACAAATTGTTGCTGAACTATTGGAAAATTATCATGAATTGGGTGCACGAATGGCACTCAAAATGCATTTTCTTCATTCGCATCTACAAGGTACAGTGAGCGACGAACAAGGGGAGCGTGCTTACCAAGATTTAATGAATATTGAAAGAAATTATCAAGGATTTTGGGACAAAAGCATGCTGGGAGACTATTGCTGGACTCTAATACGTGAAACCGAACCCAATAAATGCAAAGGACGTTCAAATAACGTTATTTacttttga
Protein Sequence
MDEHRLIEEVRMRPALWNLMDAGIKSRGLASKLWKEVAQTLNVDDDNRRKRRRRCLTKDEHTDDSHSRSISENKIENSRLADDDRPCSLENDDGDDEDYDLDSDQMLLEEIQSIASPQEGNLVAVDTPEEYVPNEIGKNPQVTPASQTNEMDVHHLIEEVRMRPALWNLMDAGINSRGLASKLWKEVAQTLNVDDVERCKRRWTNLRDTYHALVKRLACKRERDLELGIEEPLAHYTSSWPHFNALHFMKDNRRKRRRRCLTEDEYEHTDDSQTHSISEIKIENSRLADDDKSYSLENNDDGDDEDNDLDSDQMLLDGIQSIASPQEGNLVAVDTPEEYVPNEIGKNPQMTPASQTTTSFRSNVRSRLFRYRGCRTNMSNVATSVERHIPNEMDVHRLIEEVRMRPALWNLMDARIKSRGLTSKMWKEVAQTLNVDDVERCKRKWAHVRDNYHALVKRLACKRERDLELGIEEPLAHYTSSWSHFNALHFIKDHRPKRRRGLTEDECEHTDDSQSHSISEIKIENTRLADEDKPYSLENDDGDDEDYDLDSDEMLLEEFQSVASPQKCNLVAVDTLEENVQNEKGKNPQLTQASQTTTTFHSNVTSGNSEYQLMFTPQSLIQLPATIKVARISVGNPIEVHTTSLKVNDPKDLKSASTSAIPITHAINTKTSYESVAEILTLLKYNDNTWKICDLFQVIGLLTGIQGRFTKYCCFLCLWESRATCHRCVRTERPKRTENSPGKQNISNQPLIDPNDVLLPPLHIKLGLFKNFVKALDKDGTAFKYLLAGFPKISYAKLKNGIFVGPQIRKLLNDENFSQCLLEKEYAAWKSFKSIVNSFLGNNKRKNYRQIVAELLENYHELGARMALKMHFLHSHLQGTVSDEQGERAYQDLMNIERNYQGFWDKSMLGDYCWTLIRETEPNKCKGRSNNVIYF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-