Basic Information

Insect: Eucriotettix oculatus
Gene Symbol: salm
Assembly: GCA_034510155.1
Location: CM067381.1:50775044-50789338[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 7.9e-06 0.00082 21.0 0.9 1 23 385 407 385 407 0.98

2 9 1.6e-05 0.0016 20.0 2.1 1 23 413 435 413 435 0.98

3 9 0.099 10 8.1 3.8 2 23 707 728 706 728 0.98

4 9 6.8e-08 7e-06 27.5 0.6 1 23 734 756 734 756 0.97

5 9 9.5e-05 0.0098 17.6 2.6 1 23 766 788 766 788 0.98

6 9 0.0041 0.42 12.4 2.1 2 23 1013 1034 1012 1034 0.97

7 9 0.029 3 9.8 1.2 1 15 1040 1054 1040 1055 0.95

8 9 2.2e-06 0.00023 22.7 4.0 3 23 1216 1236 1214 1236 0.96

9 9 1.8e-07 1.8e-05 26.2 0.9 1 23 1242 1264 1242 1264 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	7.9e-06	0.00082	21.0	0.9	1	23	385	407	385	407	0.98
2	9	1.6e-05	0.0016	20.0	2.1	1	23	413	435	413	435	0.98
3	9	0.099	10	8.1	3.8	2	23	707	728	706	728	0.98
4	9	6.8e-08	7e-06	27.5	0.6	1	23	734	756	734	756	0.97
5	9	9.5e-05	0.0098	17.6	2.6	1	23	766	788	766	788	0.98
6	9	0.0041	0.42	12.4	2.1	2	23	1013	1034	1012	1034	0.97
7	9	0.029	3	9.8	1.2	1	15	1040	1054	1040	1055	0.95
8	9	2.2e-06	0.00023	22.7	4.0	3	23	1216	1236	1214	1236	0.96
9	9	1.8e-07	1.8e-05	26.2	0.9	1	23	1242	1264	1242	1264	0.98

Sequence Information

Coding Sequence: ATGGGGCTGCGGGACGCCTCGAGTATTTGCGTGCGAGTGCGTGGGAGGCGGGGCAAAGAGACGCCCACCTGTCATAACCGCCCGCGCACGCGCGCTGTTGCACCATTGTTGTGCAACAATGACAGATGTGCTAAAAAAATACGTTCTGCGGTCCTCGGGGCATTTGCATTTCTGCGGTCGTACTTGGATGATGGAGAAAGGACGTGCGGAAGGAAAGCCGCAGTCCTTCCTGAAGTTGAGGGAAATTGTCTCCGGATCTCCCTCTTATTTTGGCTGCCAAGAATAGCTCCATTTGTTTCCTTCCAACCTTCCGTGACGACGGTTGCCGTGACGGACGAGGAACCTGTGGCCGAGAGTTCAGCCTCCGAAGAGGAAGAAGTGACGCATCCTGACGACTTACTAGACGAACAGAACAACAACACTAGTCCCGACGAGGCGGAGACGCCGCGCGCCGCTTCCGCCGCGTTCCCGTTCCCGCTGCCGGGCCACCACGTAACACTGGAGGCGCTGCAGAACACCAAGGTGGCTGTGGCGCAGTTCGCCGCGACGGCCATGGCGGGCAATGCAGACAACGCGGCGGCGCTGCAGGAGCTGGCCGTGCTGCAGTCGACGCTCTTCACGCTGCAGCACCAGCAGGTGATGCAGCTGTCGCTCATCCAGCAGCTACAACAGCAGCTGCAAATCACGCGCTGTCCCAAGGATACCGCCTCGCCGCCCCCGCAGCCCGCGGACAGCGAGAGCCCCCAGCCGCCCCCGCCTCCGCCCACTACACAGTCTCTACCGGCGTCGCCGCCGGCAGCCGCAGCGGCAAAGCAGCAGCTGAAGCCTCCGTCGCCTCCTCCGCCTCTTCCACCTCCTCCGCCCCCTCCACCACCCCctcaacagcagcagcagcaacagcaactTTCGTTGTGCTCCATATCGTCATCTCTGGCGTCATCCATCATTACAAATCCGGACCCGCCACCACTCAACGAACCGAACACGCTGGAGATGCTACAGCGCCGTGCGCAGGAAGTGTTAGACAACGCCAGCCAGGGATTGCTGGCCAACAACCTCGCCGACGAGCTCGCCTTTCGCAAGGGCGGCAAGTCTAGTTCACTGTCACCCTACGACGCCAAGGCGGGAGGACGTAATGAACCTTTCTTCAAACACCGCTGCCGCTACTGCGGCAAGGTTTTCGGAAGCGACTCGGCCCTGCAGATACATATCAGGTCCCATACAGGTGAGCGCCCCTTCAAGTGCAACGTGTGTGGCAGCAGGTTTACGACAAAAGGAAATCTCAAAGTCCACTTTCAGAGACACACGGCTAAGTTCCCCCACATAAAGATGAACCCTAACCCAGTGCCCGAGCATCTAGACAAGTACCACCCTCCCCTCCTAGCGCAGCTGGGTCCTCATCAGAGCATGTCTCCTGGAATGCCTCCTCATCCACCGCCCCAAGCGCAGCCACCGAGCCACCATCACCCCTTCCATGCGGCGGGTTTCCCGCCTCCGTCGCTATACCGCCCGCCTCATCACGAACTACTGCCACCTCCGCCACAACACCATTTGGCGCCGCCCCTACTTCCTCCGCCACCACCTCACGCTCTTTTCAGTAACGTCGCCAGAAACGAACAAGACGCGCCCGAGAATCTTTCCAAACCGCTTTTGCATCCGTCTCCTTCTCCACCGAGACAGGATAACGAGATGTTTCCTAAGGAAGAGGAGATGCCGCCCCCATCGCGGGAGGACGACGACTGTGATGGGCGACTCAGTCCGAAACGCGAGCCCGAAGAGCACGACGACGTTGATTTGGGAAGGTTCCCGTCCCCACCTCCCTACGACGACTGCAGTCTGGACAGCAAATACAGCCAGGAGGATGACAGCTTCCAGGACCAACCGGAAAACCTTTCTAGCAAAGCTACGTCAGCCTCGCAGAGGTTGTCACCACCCAGCTCCACGTCCTCAGGGAGCGTAGACCCGGCTAAAGACCCAGCCATCTACACGAGCCTGTTGCCTCGTCCCGGCAGCAACGACAACTCTTGGGAGAGTCTTATCGAGGTCACTAAGACCTCGGAGACTTCCAAACTCCAACAACTTGTGGACAACATCGAACACAAATTAACGGACCCAAATCAGTGCGTGATCTGTCATCGTGTACTATCGTGCAAGAGTGCGCTTCAGATGCACTACCGTACACACACGGGCGAGCGGCCATTCAAGTGCAAGATATGTGGCAGGGCTTTCACAACCAAAGGCAACCTCAAGACGCACATGGGCGTACACCGTGCCAAACCACCCGCGAGGGTGCTGCACCAGTGCCCCGTTTGCCACAAAAAGTTTACGAACGCGCTGGTACTCCAGCAACACATTAGGCTGCACACGGGTGAACCTACGGAGCTCACCCCTGAGCAGATCCAAGCCGCCGAGGTTAAAGACTTTCCCCCGACTTTTCCTCTACCAGGAAGCCCCTTCCTTCAGAGTTTCCCCCCACTTCCGCCACCGGGGATCCACCTGGGTCTCAAACATGAGGTCAAAGAGGAGAAACTTGACTACGTTGATGAGGATAACACTAACAGTAGTGGCGAAGGAGGTGGTGGTGTGGGAGGAGGAGGTGGTGGTGGTTCCAACGCAAACGGCCATCagcagaaccagctacaaccaccCTTACCGCCACCTCCTCCAAGCTTCTGCACTTCCCTGGCTGCCCTGGAGAACCAGGTCCGCACCATCACAACAATGGCGTCGCAACTGACGCCTTCCTCTTCGGAGGAAATGAAGTCGCCGCACATAATGCAAAGCGGTGTTCCACAAGTGAACGGCGAAAGGTCGCCGTCGCCTTCCCCCCAGCCTGAGAGCCCGGCGCCATCTGAGTCAGGGTCTCTGGGTGCCCTGGACCTCACACCCCGAGCTAACCCTGCGGGAGTCTTCTCCGGATTTGGGCTCCTGCCCCCAGGCTCTTCGCCGCTCATCACCTCTGCCTTGACCTCTTCAGTTTTAACTTCGACGGCGTTCAGCCCTATCGGATTAACTTCAGTGCGTCCGGGGAATACAACATGCAACATTTGTTTCAAGACATTTGCTTGTAATTCTGCTCTGGAGATTCACTATCGGAGCCACACCAAGGAACGTCCTTTTAAATGTACTGTTTGTGATAGAGGCTTCTCTACAAAGGACAACACAGATGATCAAGGAAACCATGATTGTATCTGTGACCTCTTGGGTCAGTGGCGTATCCAGCGGGACAACAGTGGGGGTGGACCCATTAACAAGCCTAAAGCACAGACAAAGAGAAATGATCCaagtaagaaaaaaagaagTGGAAAGAAGTATACTGCTAGGCTGCCCCCTCTGCTATACAACCCTGGATACGCCGCTGACTGGCACCCTTTCTTGGGAAATATGAAGCAGCACATGTTGACACACAAAATTCGGGACATGCCAgctcatttatttgaaacaaacaaaccCACAATGCCTCCACCTGTGCCAGGCATTAATGTCCCAAATGAGGATTCTACAAGCACAGAGGACCGGTCCATGCCAACTCCCACATCTTTGGAACCTGCTCCAAAACCAGATTTGGGAGTGAAGAGGTCTCCTCCAGAGGGGGAAACAGTATTGCCCATTCCAAAGAGGCAACCAGGCTTGCCAAAACACTTGTGCCATGTTTGCAATAAGAACTTCTCGTCTTCGTCAGCACTGCAGATACACATGCGCACCCATACTGGGGACAAGCCTTTCAGATGTACGATCTGTCAAAAAGCATTCACCACTAAAGGCAATCTGAAGGTACACATGGGTACACATATGTGGAGCAACGGGGCCTCTCGCCGGGGTCGTCGAATGTCCCTGGATCTCCCACCAATACCAATGACACCCAAAGATTCAGAGTTCCTTCAACGCAGACCGGATCTTTTCTATCCATATCTTCCAACACCATTCCTTAATGGCATGCAACAAAAGttgaATGAGATCTCAGTTATCCAAAGTGTGAACAGCAACAGTGGTTTGAGCCCTCCTGGAGGAAAATATGCAAGTTTGCTTGGTTTCGGTGGATATCCAACAGATAAGCCGTTGCTACCTGACCCTACTCGATCACAGCCTGGTTCGCCTCTATCAGACAAGCAACCATCATCAGTTTCTCCTCCACCACCACTATCCATGAGCAGCCACCATGGATCACCTCCTCGACTTGGTGGAGACATTTCACTGTCTGAAAGAAGTATGTGGGACATTCACTATGAACGGAAGCCATCCATGGGGAATGGAGAAGAACCAATGGACGTGTCTCCATCCCCACCAAGCCATGTTAATCCACATCAGCAGACAGCCCCGCGTGGTGAAGGCCTTGCTGCATGA
Protein Sequence: MGLRDASSICVRVRGRRGKETPTCHNRPRTRAVAPLLCNNDRCAKKIRSAVLGAFAFLRSYLDDGERTCGRKAAVLPEVEGNCLRISLLFWLPRIAPFVSFQPSVTTVAVTDEEPVAESSASEEEEVTHPDDLLDEQNNNTSPDEAETPRAASAAFPFPLPGHHVTLEALQNTKVAVAQFAATAMAGNADNAAALQELAVLQSTLFTLQHQQVMQLSLIQQLQQQLQITRCPKDTASPPPQPADSESPQPPPPPPTTQSLPASPPAAAAAKQQLKPPSPPPPLPPPPPPPPPPQQQQQQQQLSLCSISSSLASSIITNPDPPPLNEPNTLEMLQRRAQEVLDNASQGLLANNLADELAFRKGGKSSSLSPYDAKAGGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHIKMNPNPVPEHLDKYHPPLLAQLGPHQSMSPGMPPHPPPQAQPPSHHHPFHAAGFPPPSLYRPPHHELLPPPPQHHLAPPLLPPPPPHALFSNVARNEQDAPENLSKPLLHPSPSPPRQDNEMFPKEEEMPPPSREDDDCDGRLSPKREPEEHDDVDLGRFPSPPPYDDCSLDSKYSQEDDSFQDQPENLSSKATSASQRLSPPSSTSSGSVDPAKDPAIYTSLLPRPGSNDNSWESLIEVTKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPARVLHQCPVCHKKFTNALVLQQHIRLHTGEPTELTPEQIQAAEVKDFPPTFPLPGSPFLQSFPPLPPPGIHLGLKHEVKEEKLDYVDEDNTNSSGEGGGGVGGGGGGGSNANGHQQNQLQPPLPPPPPSFCTSLAALENQVRTITTMASQLTPSSSEEMKSPHIMQSGVPQVNGERSPSPSPQPESPAPSESGSLGALDLTPRANPAGVFSGFGLLPPGSSPLITSALTSSVLTSTAFSPIGLTSVRPGNTTCNICFKTFACNSALEIHYRSHTKERPFKCTVCDRGFSTKDNTDDQGNHDCICDLLGQWRIQRDNSGGGPINKPKAQTKRNDPSKKKRSGKKYTARLPPLLYNPGYAADWHPFLGNMKQHMLTHKIRDMPAHLFETNKPTMPPPVPGINVPNEDSTSTEDRSMPTPTSLEPAPKPDLGVKRSPPEGETVLPIPKRQPGLPKHLCHVCNKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVHMGTHMWSNGASRRGRRMSLDLPPIPMTPKDSEFLQRRPDLFYPYLPTPFLNGMQQKLNEISVIQSVNSNSGLSPPGGKYASLLGFGGYPTDKPLLPDPTRSQPGSPLSDKQPSSVSPPPPLSMSSHHGSPPRLGGDISLSERSMWDIHYERKPSMGNGEEPMDVSPSPPSHVNPHQQTAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01565785;
90% Identity: iTF_01565785;
80% Identity: -