Eocu016624.1
Basic Information
- Insect
- Eucriotettix oculatus
- Gene Symbol
- -
- Assembly
- GCA_034510155.1
- Location
- CM067377.1:130902210-130914493[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 8.4 8.6e+02 2.0 0.3 1 23 166 189 166 189 0.93 2 18 2.2 2.3e+02 3.8 0.7 1 23 192 215 192 215 0.94 3 18 0.094 9.7 8.2 1.5 2 23 219 241 218 241 0.96 4 18 2.6 2.7e+02 3.6 0.4 1 12 302 313 302 318 0.82 5 18 0.015 1.6 10.6 1.0 3 23 416 437 415 437 0.95 6 18 2.4 2.5e+02 3.7 0.2 2 23 471 493 470 493 0.95 7 18 0.0042 0.43 12.4 0.1 1 23 901 925 901 925 0.92 8 18 0.4 41 6.2 0.4 1 23 939 962 939 962 0.96 9 18 0.002 0.21 13.4 3.6 1 23 1008 1031 1008 1031 0.97 10 18 3.1 3.2e+02 3.4 0.2 3 23 1102 1123 1101 1123 0.94 11 18 0.01 1.1 11.2 1.6 1 23 1131 1154 1131 1154 0.97 12 18 0.0025 0.25 13.1 0.7 1 23 1160 1182 1160 1182 0.96 13 18 4.7e-06 0.00048 21.7 0.7 2 23 1189 1210 1188 1210 0.97 14 18 1.1e-07 1.2e-05 26.8 2.5 1 23 1215 1237 1215 1237 0.98 15 18 0.0012 0.12 14.1 4.7 1 23 1243 1265 1243 1265 0.99 16 18 2.7e-05 0.0028 19.3 4.8 2 23 1272 1293 1271 1293 0.96 17 18 0.00011 0.011 17.4 0.6 2 23 1300 1321 1299 1321 0.95 18 18 0.00036 0.037 15.8 0.2 3 23 1329 1350 1328 1350 0.95
Sequence Information
- Coding Sequence
- ATGACTAATGTTAGAGGGCAAGGAGAAGATCCTGACAGACTCCTTGGCCTTGATGCAGCAAGTTCATCATCTGTCAATAACATTAATCCATACCTCATGAACCCATTGCTGGCAATGGGTTTACCCCAACTAGCAATGTTCATGCAACAAAACCAACAGCACCAACATATCCTTCAATCAAATACTAACCAGTCAGCACCTTCACTTCTAAATCCTTTACTTATGTCTTCTATGTTAACACCAGGTCAAGTTGGTGGTATCAGTTCTGTGTCTGCTTCTGAACAGGCTACTCCAAAATCTTGGGCCCAAAGAAACATTCCAAGTTATCAACAAAGCAATGTCAAGACTGTTGGAACTGTTGCTAGTTCTGCTGCATTGGTCAATTCAAGTTTAGCTGCAACTCCTTTAAGGCCAATGGTACAAGTTCCACGGGAAAACCAATCAGCTGTGATACAGAAAGAGGAATCTGTTTCTACTGGTACATCCAAACATCCTTTTGTATGCGAGCTTTGCCGGCAGTGGTTTTTTGCTAAAGAGAAACTTATAATGCATCTTGTTACAAATCACTCTATGCATTATTGCCGCTTTTGTTCAGAATTATTTAGTAGTCCTGAAGATCGTGATATACATATTGAGAAAATTCATCTTCCATTGCAGTGTGATATGTGTGAATCTTGTTTATCAAATTCACAAACTTTATCAAACCATTATCTCACTGTGCATGATGTTCAAAGCTGTTTATTTTGTGGGGTTTTGGTTAGGCCAAAGTCGTATTATGGAGTACATGTTAGGAAGAAACACTTTCTCCTTACGGAAGATGCTTTGGATGAAGTACTTCACGATTCAAATAATGTTCATATAATTCGCACTTGGGATTCAGAAGAGAGTGGCTCAGTGTGGAATTTTACATGTAACTTGTGTGGCAAAGAACGTAAAAGGACAGAGACATTTGGACACTTCTTTTCTTATCATCGATTATCTTTACCGTGTTTAATTCAACTTTTgtcatctgaaaatatttctgtttctgtCCATGGAACACCAGCACCTGCTTCCAGCCTAATTCCAAATGCATCAGATGAAATTCCTTTGCCCATAAGTGATGCCTCTCACAACTCAGGGAATTCACTTGTCAACAGTACAGAAAATCCGTTCACTACACTGACATGTAGAGTGTGTACAAATCCATTTTCTCAACAAGTGCCAAAACCAGCTCATGATCTCTTTTGTCGTGGATTAAACTTGTGTCGTGTCTGTGACCGGACGTTTTCAACTAAGACAGCCAGAAACAACCATGCATTAAAAGAACATGGAAAACTGCCATGTCGAATTGGGTGTCCtccaaatattgtttcttttactCAGGAAAAAGATCTTATAGTTCATTATTGGCAGGATCATAATGTGACCGTGTGTCTTTACTGCAAAATTCTCTTATCGGACAGGAGTCTTGTAGTTGAACACCTCAAAAAAGAACATTTGTGTTCTCAAGATTGCAGTGCTATGGAAGATTGTGGTCCAAAATTTGGTGCAGAACTGTTCCAATGCAAGACTTCTAATTCTTCATTTCATGTTCAGTGTTCTTTATGTAACATTGATATAACACCTATAATGAAAGATATTGTTCTTCTCTTCAAACATCTCTTTTATCACAAAATCAGTTTGCAAGCAGCATTGGAATTActtgaaagaaatttacttattgatAATGATTGCCCATCCAATGATAGTGATGAAAAAACTGCAACAGAAGCAACAGTTCATGAAGAGTCTGTTACACACATTGATTCATCCAATACAAAAATCTCTTTACAGTCCTTAGAAGCTGTTCTTCCTTTAGAATGTGATTTGTCGGAGCAAACTGAAAAACTTAAGAATTGGAGCAAAAAACAGATAGTATCTCATTCAAATGAAAACTGTAGTAAAGAAAGCATTTCCTCTTCCAAGCCAGGGGATGTCGAATTTGTTACTACAAAGGGTACACATTCTAGGTCTATtcaaaaagaaattctgaagGAAGGACAAGTTCCTACAAAGGCAGGAAAAAATCCTAAGATGAGAGTTGGAAAATCTGAAGATAAAAATGGTGAAAGAAGTAGGTTTTCTAAAACAAGTGAAGAAACCAATTTTGATTCATCCTCTGATGATCCAACATCAGATGAAGATTTTGGAGTTTCTGAAGCGGAAGCAGCTGAAAACGAATACACTGAAGAAGATGATGAGAGTATGGCACTAGaggaacaaaaattgaaaacaaatgtcTTAAATTTAGAAAGTGAGGAACTTGAAGCTGAATTTGATCCTCATGATATTGAGTGTGTGTACACTGATACAAGTGACGATGAATGTGAGGatgtaactaaattttttacatcaatGAATTTAAGTATCAAACAAGAACAGCTTGATGAAGAAATAGACCAAAAAAATTTGCCGTCAATTGCTGAAAAAGTGCATGGAGTCGATGTTCTTGAACAGACTGTGAAAGAGATGTTTGGTGGTGCTGGTCTTACTACTAATAGAAGTCCAAGTGCGGTTCATGTTAAAAATGAACCGGTTACTGATTTTAATGTCAGTGTTGTTGAAATGTTATGTGAGATATGTCAAGGTAGGTTCTTGATGGAGGAAGGTCCAAGAGAATTAGCTCGTCATATGAGCACATCGCATGGATTTTCAGTGTCTACATATGGTGTACGAGAATATCGTTGTTCTGCTGATTGTGGTGAATCATTTGGTTCAGAGCTAATGCTTCAAAAGCACAGGGCAGATGTTCATGATGAACCACCACCCCGTCATCCATTACAACATCCTGATTATAGTTGTCAGTTTTGTGCCTTACGATCTACTTCAAAAGCAGCAATGCGTCAACACTTGTCATCTGCACATTCTGAAGAATGTGTAAAATTATCTCCATTTGCAGATATAGCATATCATTGTAGGCATTGTTCAGAAAAATTCTGGAAAGTTGAAGATAGAAATGACCATCAGGTGCTGAAACACGAGGAccaaattgaaaacttttataaatgttacgTCTGCCAACGAGTCTACTCCAGCaagCTATGTCTCAACCGACATCTCAAACTTGATCATACTAGTCAGCTGAAGTACTCATCGCTGGCTTACAAGTGTAAGCTTTGTCTAATGCTTCTACCAGCAATTGCAATGCTACGGCCTCATTTTCAAGACAGTCATCCTACATCTCTTGTATTTCATTGTCACCGTTGCAATACAACACTCAAAACAAAGAAGACATTAAAGTGCCACATTAAGAATGTACATTCCGAAGAAAGACGAAGAGATTGTGGTCTTTGTGGGAAGGTTTTGTGGAGTAAACGTGCTTATGCTATCCATTTTCGTATGAAACATAGTGCTCAGTCAAAGGTTGGTTTCCGATGCCGAATTTGCCAGCAACGATTTGATTCAAAagatgaaagaaagttgCATTATCAAGTTGACCATGAAGGAGAAAGCCCTTATCATTGTGCTGAATGTGGAAAAGGATTTGCTTCAAAATCTGGGATGTATGGGCATCGTCAACTTCATACAGGTTCAGGAATATCAAAATGTGAATACTGTGGCAAAGAATTCACGcgGAAAGATAGCTATAACGAGCATCTTTTAATTCACAATGGACCAAGACATAAATGTCCTCATTGTCCCAAGGAATTTGTGCAAAGGTCTAATTTGGTCAGACACATAAGAATTCATACAGGGGAGAAACCGTACAAGTGTCTGTACTGTGAAAAGTGTTTTTCTGACAAAGGTGCTTGTAATTCGCACATTCGAGTTCATACGCGGGAAGAAACTTGTAGCTGTCCATATTGCGGCCAAACATTCTCTAAAAAACAGaaacttAAGTACCATATTAGAAAACATACTGGAGAAGGTCTTATGACCTGTGAGATTTGTAGCAAGacATTCACAAACAGCTTTGCATTGAAGGAGCATAGAGTGATTCACAATCGTCAGACTCAAATATTGTGTCAACAATGTGGAAAAGGTTTTAATAGTGAAAAATACCTTCAGCGCCATGTTGCTATTGTACATGAACCATCAAAGCTATATGCTTGTCCTTTGTAA
- Protein Sequence
- MTNVRGQGEDPDRLLGLDAASSSSVNNINPYLMNPLLAMGLPQLAMFMQQNQQHQHILQSNTNQSAPSLLNPLLMSSMLTPGQVGGISSVSASEQATPKSWAQRNIPSYQQSNVKTVGTVASSAALVNSSLAATPLRPMVQVPRENQSAVIQKEESVSTGTSKHPFVCELCRQWFFAKEKLIMHLVTNHSMHYCRFCSELFSSPEDRDIHIEKIHLPLQCDMCESCLSNSQTLSNHYLTVHDVQSCLFCGVLVRPKSYYGVHVRKKHFLLTEDALDEVLHDSNNVHIIRTWDSEESGSVWNFTCNLCGKERKRTETFGHFFSYHRLSLPCLIQLLSSENISVSVHGTPAPASSLIPNASDEIPLPISDASHNSGNSLVNSTENPFTTLTCRVCTNPFSQQVPKPAHDLFCRGLNLCRVCDRTFSTKTARNNHALKEHGKLPCRIGCPPNIVSFTQEKDLIVHYWQDHNVTVCLYCKILLSDRSLVVEHLKKEHLCSQDCSAMEDCGPKFGAELFQCKTSNSSFHVQCSLCNIDITPIMKDIVLLFKHLFYHKISLQAALELLERNLLIDNDCPSNDSDEKTATEATVHEESVTHIDSSNTKISLQSLEAVLPLECDLSEQTEKLKNWSKKQIVSHSNENCSKESISSSKPGDVEFVTTKGTHSRSIQKEILKEGQVPTKAGKNPKMRVGKSEDKNGERSRFSKTSEETNFDSSSDDPTSDEDFGVSEAEAAENEYTEEDDESMALEEQKLKTNVLNLESEELEAEFDPHDIECVYTDTSDDECEDVTKFFTSMNLSIKQEQLDEEIDQKNLPSIAEKVHGVDVLEQTVKEMFGGAGLTTNRSPSAVHVKNEPVTDFNVSVVEMLCEICQGRFLMEEGPRELARHMSTSHGFSVSTYGVREYRCSADCGESFGSELMLQKHRADVHDEPPPRHPLQHPDYSCQFCALRSTSKAAMRQHLSSAHSEECVKLSPFADIAYHCRHCSEKFWKVEDRNDHQVLKHEDQIENFYKCYVCQRVYSSKLCLNRHLKLDHTSQLKYSSLAYKCKLCLMLLPAIAMLRPHFQDSHPTSLVFHCHRCNTTLKTKKTLKCHIKNVHSEERRRDCGLCGKVLWSKRAYAIHFRMKHSAQSKVGFRCRICQQRFDSKDERKLHYQVDHEGESPYHCAECGKGFASKSGMYGHRQLHTGSGISKCEYCGKEFTRKDSYNEHLLIHNGPRHKCPHCPKEFVQRSNLVRHIRIHTGEKPYKCLYCEKCFSDKGACNSHIRVHTREETCSCPYCGQTFSKKQKLKYHIRKHTGEGLMTCEICSKTFTNSFALKEHRVIHNRQTQILCQQCGKGFNSEKYLQRHVAIVHEPSKLYACPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -