Basic Information

Insect: Eucriotettix oculatus
Gene Symbol: ARB_02921
Assembly: GCA_034510155.1
Location: CM067382.1:49241760-49255279[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.4e-05 0.0045 18.6 1.4 1 23 314 336 314 336 0.97

2 15 0.00017 0.018 16.8 1.7 3 23 344 364 343 364 0.99

3 15 0.00064 0.066 15.0 0.1 1 23 497 519 497 519 0.98

4 15 0.036 3.8 9.5 0.3 1 23 525 548 525 548 0.96

5 15 5.8e-05 0.006 18.3 3.3 1 23 566 588 566 588 0.97

6 15 2.7e-05 0.0027 19.3 0.9 1 23 600 622 600 622 0.97

7 15 0.0063 0.65 11.9 0.2 1 23 628 651 628 651 0.96

8 15 0.0022 0.23 13.3 2.2 3 20 660 677 659 680 0.93

9 15 0.00087 0.089 14.6 3.1 3 23 688 708 686 708 0.97

10 15 0.016 1.6 10.6 0.1 2 23 714 735 713 735 0.96

11 15 0.00025 0.026 16.3 0.6 1 23 744 766 744 766 0.98

12 15 0.0063 0.64 11.9 0.2 3 23 774 794 772 794 0.97

13 15 2.6e-05 0.0027 19.3 0.2 1 23 800 822 800 823 0.95

14 15 0.64 66 5.5 1.9 3 23 840 860 838 860 0.97

15 15 0.0052 0.53 12.1 0.5 1 20 1006 1025 1006 1028 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.4e-05	0.0045	18.6	1.4	1	23	314	336	314	336	0.97
2	15	0.00017	0.018	16.8	1.7	3	23	344	364	343	364	0.99
3	15	0.00064	0.066	15.0	0.1	1	23	497	519	497	519	0.98
4	15	0.036	3.8	9.5	0.3	1	23	525	548	525	548	0.96
5	15	5.8e-05	0.006	18.3	3.3	1	23	566	588	566	588	0.97
6	15	2.7e-05	0.0027	19.3	0.9	1	23	600	622	600	622	0.97
7	15	0.0063	0.65	11.9	0.2	1	23	628	651	628	651	0.96
8	15	0.0022	0.23	13.3	2.2	3	20	660	677	659	680	0.93
9	15	0.00087	0.089	14.6	3.1	3	23	688	708	686	708	0.97
10	15	0.016	1.6	10.6	0.1	2	23	714	735	713	735	0.96
11	15	0.00025	0.026	16.3	0.6	1	23	744	766	744	766	0.98
12	15	0.0063	0.64	11.9	0.2	3	23	774	794	772	794	0.97
13	15	2.6e-05	0.0027	19.3	0.2	1	23	800	822	800	823	0.95
14	15	0.64	66	5.5	1.9	3	23	840	860	838	860	0.97
15	15	0.0052	0.53	12.1	0.5	1	20	1006	1025	1006	1028	0.94

Sequence Information

Coding Sequence: ATGGGTCTGGGAGGAGGTTTCCTCATGACCCTATATGTTAATAAGTCTGTGATTACTCTGAATGCCAGAGAATCAGCACCAGCTGCTGCTAGAAATGAGCTCTACCTAGATGACGATTTGAGCACACGTATAGGTAGCCTAGCTGTGGGAGTGCCTGGAGAGTTGAAGGGTTACTGGGAAGCGCACAAGAAATATGGGCTGTTACCCTGGGATGAAGTTGTGGCACCGGCTCTGAAGGTGTGCGAGGAAGGATACAACATGACTAAACATCAGGCTGACTCTCTTACCATGAATTCAAATGTTCCAAATGACACCACATTAAGGGTTAGCTGGGACAGGCCAGTTGCTGTGGACCTTCATGGGAAAGAGACAATGTACAGTGTTCCACCACCAGGGAGTGGTATTCTTCTTGGTTTTATTCTTAACATCCTCAATGGCTACAATTTCACACCAAAGGATATCCAGGATGTCAATTCCACTATTCTCACATATCACCGTATTGTTGAAGCCTTTAAGTATGCTTATGGGCAGAGGACCGAAATTGATGAGCTGATGCTTAAAATGACTGAATCTGTGGGCAAGTACACCACAATCCCAGCTGTTCATCAGCGGTGGGATGATGTTGATGTCCCAGATAACTGTGATGGAGAAGTCATTTGTGGTATAACCAATGACTGTATCATATTTCCTCAGACTAATAATACAGCTGAGGTACGGCCTAGCCAACCAGAATTCATAGAGTATGCCTTCCCAGACCAGGGTATCTTAGACATTCAGGAGGTGGAGGTTGTTTGTGAATCATCATGGAACAACAATGGAATTGGAGCCAATGAAGAATGTGACCAGCTTGAGGAAGATGTGAAGTACAGCATCAAGTATGAGGGGGAGGAAATAGACATTCCTCTCCCAGAAGAAGACTCTTACTCTTCCATGAGGCCTTATCCATGTGACTTCTGCAGTCGGCGGTTTCGTAAGAAAGTAAACCTTATGAACCACATGGTGTCACACCAGACAGATAGACCCCATGGATGCAACATGTGTGGGGCCCGTTACAGGCGTAAATGTGACCTCATCAATCACATGAAGATTCATGCTTATGCACCAGGACGTGACTTGAGCAGtgaagaggaggaagaggaagaagaacCTGATCAGGAGCCTGAACCAGAGGAAGACATGTTAGATGAAgatgatgaattattttctgacatgGATGGGGAATATAAGGTGCGTCGGAAAAAGGATGAGAGCAGCAAAGGAGGAAAGCGCCGGAACTATGGTGGCAGTGCAAGTGGATACCATTCCAAAAGGAAATCAAGCGAGTCCAACATGATCAGTGGAAGTACGTCCCACAGTTATGTTGATGAAGACATGAGACTCTTAAAGCAGCCAGCACCTGTTTTTGCTGACAGGGACCAGTCGCCTGAACCTCGCCAGGAAAGGGAACCATTACCTCCACGATGGCCTGTTGTAGATGAAAGCAGGCCATATGTGTGCCAACACTGTGGAGTTGGCTTTGCTCGCGAGAAAGCCCTTGGATCGCATGCCAGAATACATGCTGGGGATAGTCCCTTTGAGTGTAATACATGTGGTGAGATGTTTTGGGATGTAAACTTGCTGCGTGAGCATTCCAAGACAAAGCATCCAAGCAGGTACGACTTTGAACCTTCTTATGATGAACAGCGCTGTCCTGATTTCCACTGTGAGGTCTGTGGAATGGTATTCCACCGTCAGGATCTGCTCAAGAGGCACAGCAGGATCCATGTAAAACCCGAGCCGGATGATGAAGATGGAAACCATGAGTGCCAGGAGTGTGGTCAAAACTTCACCAGCCGTTCTGAACTCCTCACTCATGCTGAGACTCATGGTCGGTACCAGCCTCACCGTTGCATGTTGTGTGGGGAACGTTTTATTGACCCAGCTGCCGTAGCCACCCATGTGAAGCGCCGACATGCCCGCAGTATTCCTCCTAATGCCTGTACCTTGTGTGGCAAGACATGTCGAGACAGACGGTCATTGCAGAAGCACACATGGGTGCATTCTGCAGAGAGGAGCTTTGGTTGTCAGAACTGTGGCAAACGTTTTCACAGCCGGGCCAGACTAAAGCGGCATATGGTGTCACACCGGGATAAAGCAGTGACATGTGTTGAATGTGGTGAAGAATTTCCTGATGGTCGTGCACTTATAAACCATAGACACAGCCACAACAGGGATAGTTTAGGCCGGCAATTCTCATGCCTACAGTGTGGGAAGACTTTTGGTTCCCGTAGCAGTCAGCAGATCCATGCAAGAATACATACTGGTGAAAGACCCTATGGATGCCGCTTCTGTTGGAAGGCCTTTGCAGATGGGGGGACTTTACGGAAGCACGAAAGGATCCACACTGGAGAGAAACCATACGCCTGTCCTGTTTGCCCAAGGGCATTCAATCAGAGAGTTGTCCTCAGAGAACACATCCGATCTCACCATTCAGGTGCCGAGATGAGGTCTGCAAATGCTAATATTCCCTACTTTGGGTGCAAAGTCTGTGCTGCATCATTCAGCTGCTCAGAAGACCTGTGTGCCCATCTGATAAAGCACAGTGATGAAAATACTGCCAAACACAGACTGCCAAAAGTTGGGCCAAGGAAGTACAAGAGGAGACGCAAGTTCAGTTTACGTGAACTTCCATCATCCAACCCTGGACAAGAATCACCCGTTGAAGCCACAGACGACGACTCAGATGCTGATACTTCAAGACCAAAGGCAGTGAAGCAAAACAACTTGTTGAACAACATAGAAACATCCAAGGGCCGCCCCCGGACGAAGAATGTTAGTTATCACAATGTGAAAATGGCAAAGTTGGAGCCTGCAAAGTTCCCACATGTGCCCAAGCCTGGTCCTGGCAGGCCGAAAGGTGTTAAAAATGGTGCAAAGCACAAAGCTGAGGCCAGACCACCTGTGACTGAGAATGATGTTCTTGCTCTGAAGGTTGAGCACATTCAAGATGAGGAGAATACGGGCATCAAGGTAGAGTACACCTGCGAGATGTGCAGTGAAACGTTCCACAAGCGGTCGGAACTCCTAGTCCATGTCCCTATTCACATATGA
Protein Sequence: MGLGGGFLMTLYVNKSVITLNARESAPAAARNELYLDDDLSTRIGSLAVGVPGELKGYWEAHKKYGLLPWDEVVAPALKVCEEGYNMTKHQADSLTMNSNVPNDTTLRVSWDRPVAVDLHGKETMYSVPPPGSGILLGFILNILNGYNFTPKDIQDVNSTILTYHRIVEAFKYAYGQRTEIDELMLKMTESVGKYTTIPAVHQRWDDVDVPDNCDGEVICGITNDCIIFPQTNNTAEVRPSQPEFIEYAFPDQGILDIQEVEVVCESSWNNNGIGANEECDQLEEDVKYSIKYEGEEIDIPLPEEDSYSSMRPYPCDFCSRRFRKKVNLMNHMVSHQTDRPHGCNMCGARYRRKCDLINHMKIHAYAPGRDLSSEEEEEEEEPDQEPEPEEDMLDEDDELFSDMDGEYKVRRKKDESSKGGKRRNYGGSASGYHSKRKSSESNMISGSTSHSYVDEDMRLLKQPAPVFADRDQSPEPRQEREPLPPRWPVVDESRPYVCQHCGVGFAREKALGSHARIHAGDSPFECNTCGEMFWDVNLLREHSKTKHPSRYDFEPSYDEQRCPDFHCEVCGMVFHRQDLLKRHSRIHVKPEPDDEDGNHECQECGQNFTSRSELLTHAETHGRYQPHRCMLCGERFIDPAAVATHVKRRHARSIPPNACTLCGKTCRDRRSLQKHTWVHSAERSFGCQNCGKRFHSRARLKRHMVSHRDKAVTCVECGEEFPDGRALINHRHSHNRDSLGRQFSCLQCGKTFGSRSSQQIHARIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACPVCPRAFNQRVVLREHIRSHHSGAEMRSANANIPYFGCKVCAASFSCSEDLCAHLIKHSDENTAKHRLPKVGPRKYKRRRKFSLRELPSSNPGQESPVEATDDDSDADTSRPKAVKQNNLLNNIETSKGRPRTKNVSYHNVKMAKLEPAKFPHVPKPGPGRPKGVKNGAKHKAEARPPVTENDVLALKVEHIQDEENTGIKVEYTCEMCSETFHKRSELLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01565777;
90% Identity: -
80% Identity: -