Eocu038766.1
Basic Information
- Insect
- Eucriotettix oculatus
- Gene Symbol
- ZNF341
- Assembly
- GCA_034510155.1
- Location
- CM067381.1:70469261-70475031[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.5e-05 0.0016 20.1 1.2 2 23 137 158 136 158 0.97 2 12 2.3e-07 2.4e-05 25.8 0.5 1 23 164 186 164 186 0.98 3 12 0.0093 0.96 11.3 0.1 1 23 238 260 238 260 0.97 4 12 0.083 8.5 8.3 1.0 5 23 272 290 266 290 0.88 5 12 2.6e-05 0.0026 19.4 1.4 1 23 296 318 296 318 0.98 6 12 0.014 1.4 10.8 1.4 1 23 334 358 334 358 0.89 7 12 0.00015 0.015 17.0 0.3 1 23 360 382 360 382 0.91 8 12 2.4e-06 0.00025 22.6 1.1 1 23 388 410 388 410 0.95 9 12 0.00026 0.026 16.2 1.5 1 23 416 438 416 438 0.96 10 12 9.7e-05 0.0099 17.6 2.7 1 23 444 471 444 471 0.97 11 12 2.8e-05 0.0028 19.3 4.2 2 23 478 499 477 499 0.97 12 12 8e-05 0.0082 17.8 7.2 1 21 505 525 505 526 0.96
Sequence Information
- Coding Sequence
- ATGATGCATTATGAAGAAGTACCTCTTGATAATGACACGGTGCTCTTAGATTATGATAGTGGTCAGCCAATGAAGTCATGTAggTCCATATTGCCAAATGTGGAGTTTGTTAATACAGATATAGAGTTTATTGAATGTGAAGTGGAGATGCAGAGGTGCCAAAATGAGTCAGATATTATTGTAGAGTATGCAGATCATCAGACAACCCAAAATAATATCACTGTTATAGAAGAAGATGCTATAGTTCTCAATGTTGAGACCAATGATGCCCTTACTTTGGCCCAGGGATGTGAAAAGCTTCTTTCCCAGCAACCAGTAacttatttaacagaaattgaAGATGAGCAACATGCTATGGAAGAAGATAGAGACGACCAACATACACTTGTGAACAAATTGACCAAACTGCAATGTGAATTCTGTGAAAAAGTATTCACCAAAAATTTTGATCTGCAACAACATGTACGGAGTCATACAGGAGAAAAACCTTTCCAGTGTGTTGTTTGCGGACGTGCCTTTTCTCAGAAATCTAATGTGAAAAAGCACATGGCTTCCCATAAGGTTTGGCCTGCTACTTGTAAATCCACTATTCCTGGTCCTCCACGTCAGCTGGATAAAAGCAAAGAATGTGGAAACTCTTCTGTCTCAAAGAAGGTGCTTAGTATTGGAGGTGAAACTGGGGGGACAGAAGCTTCATTATTGGAACATTCTTATGCCTGTCAGTTTTGTGATGCCGTCTTCCCTGCATATTTGGAATTGAAAAGTCACATGAAGGAGCATTCTGACCAAAAGgtttataaatgtattcaaaaGAACTGCAAGAAAACTTTTTCTGATTTGGATGCATTCTTGGGTCACACAAATCAGCACTCCAGCGGTGTTCAGTACCGGTGTCATATTTGTAACAAGAAGTTTTCAGACCTAGAAGCATTAGGTGTGCATCAGTATTCACATAATTCATCATGTAAAAAACCAGCTAAAGAATCTGGAACAAAAGGGTTCTTGTGTTCCAAATGTAAACGTAAGTTCGCAACACAGTTGGCCTTGGATCATCATTTGGAAACTGCTAGTCATCATTTTCCATGCCCATACTGTGGCAAAGTATTTACATGGGAAAGATACCTGAGGAGACATTTACCGACTCATGTCAACTACAAGTCATTCCTATGTTCGCAATGTGGAAAATCCTTCAGGACTGAACAGTACCTCAAAGCTCACCTACTGACACACAGTGCAGAAAGACCTTACGCATGCCAACACTGCTCAGCTACATTTAACCGGAAAGATAAGCTTGCTCGTCATGCTTTGAATCACCAATCAGTGAAAAGGTTCAAGTGTCCATTCCACAATTATTTAGGTTGTTCAAGAGAATTTAATAGACAAGATAAACTTAAGAGACACATTCTGACCCACAGTGCGTCAAAACCTTTAACTtgcaaaaaatgtaacaaaacatTCCATAGGCCATCCCTTTTGAAGGAACATGAGAAGACACATCGATTGGATTTTGATTTTAAGTGTCAGCACTGTGGAAAGGTATTCAAGAACAAATTTCATATGACATCTCACATGTGCAACTGGACAATAAAAGATCCGGTTGGCCAAGCCAAAGATCTTGTGGATAACATAAATTCTTCTCAAGGGAGACAGTGCAAGATATCAGGTCAAAAGCGAACCCAGAAGAAGTTGCGAAACACAAAATCGAAGAATGGTGGAAGTAAGGCTACTGACAAACCAGATGCGGATGACAGTAATTCAGAAAACTTGAATCCGCCACCCAGTGGTCCCTTCCTTCAGGGGGACAATGTCCCTACTATAGAAATTATAGTAGTCCCTGTTTCTGTAGGAGAAACacaaaacagtgaaataaattcaaaggaaCATTCAGTTTATCACGTCATGTTTCCGTCAAATGCCAACGCCTCCGATATTTCTCCGCCTGAAGAAAGTGTTTTAACATCAGACAAGATTTTGCAGCAACTGGACTCTGTTATTACTGGTAATCCACTAGATAAAGCATGTAACCATGAAGTTGACATGACTGAAATATGTGATGAGGCAAATGCAAGGAATTAG
- Protein Sequence
- MMHYEEVPLDNDTVLLDYDSGQPMKSCRSILPNVEFVNTDIEFIECEVEMQRCQNESDIIVEYADHQTTQNNITVIEEDAIVLNVETNDALTLAQGCEKLLSQQPVTYLTEIEDEQHAMEEDRDDQHTLVNKLTKLQCEFCEKVFTKNFDLQQHVRSHTGEKPFQCVVCGRAFSQKSNVKKHMASHKVWPATCKSTIPGPPRQLDKSKECGNSSVSKKVLSIGGETGGTEASLLEHSYACQFCDAVFPAYLELKSHMKEHSDQKVYKCIQKNCKKTFSDLDAFLGHTNQHSSGVQYRCHICNKKFSDLEALGVHQYSHNSSCKKPAKESGTKGFLCSKCKRKFATQLALDHHLETASHHFPCPYCGKVFTWERYLRRHLPTHVNYKSFLCSQCGKSFRTEQYLKAHLLTHSAERPYACQHCSATFNRKDKLARHALNHQSVKRFKCPFHNYLGCSREFNRQDKLKRHILTHSASKPLTCKKCNKTFHRPSLLKEHEKTHRLDFDFKCQHCGKVFKNKFHMTSHMCNWTIKDPVGQAKDLVDNINSSQGRQCKISGQKRTQKKLRNTKSKNGGSKATDKPDADDSNSENLNPPPSGPFLQGDNVPTIEIIVVPVSVGETQNSEINSKEHSVYHVMFPSNANASDISPPEESVLTSDKILQQLDSVITGNPLDKACNHEVDMTEICDEANARN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -