Basic Information

Gene Symbol
ZNF219
Assembly
GCA_034510155.1
Location
CM067377.1:201962788-201966314[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 7.1e-06 0.00073 21.1 0.7 1 23 699 721 699 721 0.97
2 12 0.00073 0.075 14.8 0.2 1 23 727 749 727 749 0.98
3 12 6.2e-07 6.4e-05 24.5 1.2 1 23 755 777 755 777 0.99
4 12 1e-05 0.001 20.7 3.9 1 23 783 805 783 805 0.99
5 12 3.2e-06 0.00033 22.2 1.1 1 20 811 830 811 832 0.94
6 12 0.00023 0.024 16.4 0.8 3 23 841 861 839 861 0.97
7 12 5.2e-05 0.0053 18.4 0.4 2 23 868 889 867 889 0.98
8 12 3.6e-06 0.00037 22.1 1.7 1 23 895 917 895 917 0.99
9 12 0.0066 0.68 11.8 1.0 1 23 923 945 923 945 0.97
10 12 0.00054 0.055 15.2 6.7 1 20 951 970 951 973 0.94
11 12 0.01 1.1 11.2 1.9 1 23 980 1000 980 1000 0.96
12 12 1.5e-06 0.00015 23.3 1.9 1 23 1006 1029 1006 1029 0.99

Sequence Information

Coding Sequence
ATGGAGACTTCTCGACATATGGAAAACAATAGACAAATTCAAACGTGTGTTACCCAGGATAACGAGGCAGTAAACAATTTATCTGCAACTTCGGTCAACTCTTCCAGTTCACAAATTGCTAATACTAGTCACTTTTATTATCGCGGAGTTTCTCAACCGTCCCCAGCATTCAACTCTTTACTCTCCTCTCAACCTCAAAGTTTATACAATGGTGTTTTTCCATCTCAAGCGACATTTCCAAATCAGAACACGTTTGGGTACAATGGCTATAGTTTTGTCGAGCATTCTCCCTGGGTATCGGATAACAGAATTGGAGTTCCTAATAACTCCCAAACAGGGGATAGTTCTCGTGCCAAGAATATGTACACAGAAAAGCCTGGATCATTACCCCAAGGAATATCCCATAGTTGCTGCACAAACAGGATGCTGGAGCATACACCTATGTGTTCTCCTCTTTTATTGGATCAGTTTAAAGCAGCAAGTAAAGATATGGCAGGATGTCAATCAAAGGGAGTTAGTAACGTGGATTCCCAAACTTGGTTCTATGGACCCAGTTTAATTGGGTTCACTAATCAACAGGGCCACATTGAAAACGGCCACTTTAAGCGTAATGATGACTTTCCTTCCTGTTCAGTAAGTCAACTTGGGGCGACACCTCCAGAAAATGTCGATGTACGTCAACATCAAAATGTAGCTGTCAGTAATTCATCCTTCAATTCTGGAAATCATTATTCTGGtaaaagtgtaattaattgTGAGAATGGTTCAAAATGTAGCAGTTTGGAGCAAAAAGATGGaatggagaaatattttaatgttacgaAACTTCGATCTAACGGACATGTTGCGGAACAGAAGCATCACGATGAACATGCAGCAATCTTCAATGGCCCATTAGAAGATGTACTGTACTCTCATGCACCATTACTATTTCATGTCAACAATGAAAgtaatcaaaataaagtaagtGTACATTCATCATACCCATCAAAGTCTCAATCATATGTTCATAGTAATATAGATGATTTGAACAAAACATTTCCAAATGGACCAGATCAACTACCAATGTCACATTTTCAAACCCAGACTCGGTGCAATTTGGATACAAACATGCAGTGTGAAATTATTGAGTCATGTTTGTCATCAGAATGTAAAGTAGGTGGAGGAAATTCTGTGAATGGGAAAGACAGCTCTCACAGCTCAAATGATTCGTGTCAATTGCCCTTGAGCTCAAATAGTTTGTTGCCTTCAGATGCACAATCTATGTTTAATAATCAGCAGTTTACACAGAGGCAAGGAATGCAGTGCCTTCAAACTTGCACAGTTGACATCTGCATGAATTCAAATGGGCCAAACATTGACGATGAAGATAAGGAAAACAGCAATCATGATTCGTCAAGTGTAGCTTGTGAAAGTGACATAATTGTCGAAGAAACTGGTGGCGAGGAAGAGGCTGGTGATGATGTCACAGAATGTGAGAGTGCTGACTTGTTGGAAAATCCTGTGATGAAATGTTTAGTTTGCAATGTTTCTTGCAGTTCACATATTATGAAAATACGTTTTATTCAGATGAATGAAGAAACTCCTTTGACCTCATCAACTCAGATTCCAGTTGTCAAGAAATTGGAGGATGTTTTAGCTCATGAAGTGCAACTggataataatttacatgtaacCGTAATTTGTAGAAGATGTTTGAGTCTGATAAACATTGTTGATAACCTAGAATCGAAATTAACTTCTGCAAAGCATGACATAATCCAGCTCTTTAGAAACAGAAATGTGGGTGAAGTGAAATGGATTCATGACACTAAAGTTTTTGCTATGGGGATTAAAAGTCACTCACAAATTGACATTGACCCAGATAGTAATGATGTGGAGAATACAGATATTACTATTGACATTGACTTAAATCCAAAATCAGAAACATTGAACAAATTCCACCACAAATCAGGTGATTCCGCTACTGATGTGATTCCACAACCACTTGAAGAAATTGGCAATCAGGTGTTGAATATAGGAAACGGTGATACCTTAAAAATATGTGATATGGATATCAAAGTTAATGATGAAcaaaattctgttaaatataaatttatctgtgAAGTTTGTGCCAAATCATTTTCCagtaaggaaaatttaaatgttcataaaCGGCAACACACTCAACAATTTAGCTATTACTGTGATCGTTGTGGTCAAGGTTTCTCTTTGAGACGGGGTCTTGAAAACCATCTTCTTATTCACAGAGGTGAATTCAGGTTTCAATGTGAAATTTGCGGAAAGGGTTTTATTCAGCGTCACAGTCTAGAAGATCATTTGAGACGACACCAAGGAACTTTCAGATTCAAATGTAAGCAATGCAGCCGTGGTTTTATGCATCGAAGTGCCCTCAGGGTTCACATGCGTACCCACACCGGTGAACGGCCATTTATGTGTGAACATTGTGGCCGCTCATTTAGTTCCGCCTCAAACCTTCGAGTACACAAACATATATGTACAGGTGAAAAACCTTATGGGTGTGAAAAATGTGACAAGAAGTTTGCTCTCAAAGCTCAATTAACATCTcacataaaatttcatgaagGTCAGTTTTGTTCGAAATGTGAAATATGTGGTAGAGGTTTTGTCAAAGAATTTGATTATAAAGTACACTTGAGAACTCACTCTGGAGAAAAACCCTATAAATGCTCTGTCTGTGGTAAATGTTATTCCAACATAGGCAATTTGAACCAGCATGCGAAAATGCATAACAAAGAAAAGCCCCACAAGTGTGCCTTGTGTGAGAAAGGCTTTCTCAGGAAAACATTGTTAGTTGCACACATGAACCAGCACTCTGGTGAGAGACCATACAAATGTACTCAATGTGACAAAAGCTTTAGTTCTTCTCATAACTTACTCTCCCACAGTAAATGCCACTCAAAAGGCAGTAAAAAGCACATGTGCCCTGTCTGTGGCAAAGCTATCAATCATAGTTTGAAAGTCCATATGCGCACACACTCGGGGCACAAACCCTACAAATGCACATTGTGTGAGATGGCCTTTACTGTTAAGAGCACCCTAAATAAGCACATGAGAACCAAACACAAAGAAAACATTGTATTGGCAACGGAATAG
Protein Sequence
METSRHMENNRQIQTCVTQDNEAVNNLSATSVNSSSSQIANTSHFYYRGVSQPSPAFNSLLSSQPQSLYNGVFPSQATFPNQNTFGYNGYSFVEHSPWVSDNRIGVPNNSQTGDSSRAKNMYTEKPGSLPQGISHSCCTNRMLEHTPMCSPLLLDQFKAASKDMAGCQSKGVSNVDSQTWFYGPSLIGFTNQQGHIENGHFKRNDDFPSCSVSQLGATPPENVDVRQHQNVAVSNSSFNSGNHYSGKSVINCENGSKCSSLEQKDGMEKYFNVTKLRSNGHVAEQKHHDEHAAIFNGPLEDVLYSHAPLLFHVNNESNQNKVSVHSSYPSKSQSYVHSNIDDLNKTFPNGPDQLPMSHFQTQTRCNLDTNMQCEIIESCLSSECKVGGGNSVNGKDSSHSSNDSCQLPLSSNSLLPSDAQSMFNNQQFTQRQGMQCLQTCTVDICMNSNGPNIDDEDKENSNHDSSSVACESDIIVEETGGEEEAGDDVTECESADLLENPVMKCLVCNVSCSSHIMKIRFIQMNEETPLTSSTQIPVVKKLEDVLAHEVQLDNNLHVTVICRRCLSLINIVDNLESKLTSAKHDIIQLFRNRNVGEVKWIHDTKVFAMGIKSHSQIDIDPDSNDVENTDITIDIDLNPKSETLNKFHHKSGDSATDVIPQPLEEIGNQVLNIGNGDTLKICDMDIKVNDEQNSVKYKFICEVCAKSFSSKENLNVHKRQHTQQFSYYCDRCGQGFSLRRGLENHLLIHRGEFRFQCEICGKGFIQRHSLEDHLRRHQGTFRFKCKQCSRGFMHRSALRVHMRTHTGERPFMCEHCGRSFSSASNLRVHKHICTGEKPYGCEKCDKKFALKAQLTSHIKFHEGQFCSKCEICGRGFVKEFDYKVHLRTHSGEKPYKCSVCGKCYSNIGNLNQHAKMHNKEKPHKCALCEKGFLRKTLLVAHMNQHSGERPYKCTQCDKSFSSSHNLLSHSKCHSKGSKKHMCPVCGKAINHSLKVHMRTHSGHKPYKCTLCEMAFTVKSTLNKHMRTKHKENIVLATE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01565769;
90% Identity
iTF_01565769;
80% Identity
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