Basic Information

Insect: Eucriotettix oculatus
Gene Symbol: su(Hw)
Assembly: GCA_034510155.1
Location: CM067378.1:116441220-116446139[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00027 0.028 16.1 1.0 1 21 49 69 49 70 0.96

2 13 4.5e-06 0.00046 21.8 0.9 1 23 175 198 175 198 0.97

3 13 7.2e-05 0.0075 18.0 0.6 1 23 204 226 204 226 0.99

4 13 1.1e-05 0.0011 20.5 2.9 1 20 232 251 232 253 0.95

5 13 3.6e-08 3.7e-06 28.3 0.5 1 23 264 286 264 286 0.97

6 13 1.2e-05 0.0012 20.4 1.5 1 23 296 318 296 318 0.99

7 13 6.2e-06 0.00064 21.3 1.2 1 23 324 346 324 346 0.99

8 13 0.00098 0.1 14.4 0.4 1 23 352 374 352 374 0.99

9 13 3.1e-06 0.00032 22.2 3.4 1 23 380 402 380 402 0.95

10 13 0.00071 0.073 14.8 2.4 1 23 408 431 408 431 0.96

11 13 4.6e-05 0.0047 18.6 0.4 1 23 437 459 437 459 0.94

12 13 3.2e-06 0.00033 22.2 4.0 1 23 465 487 465 487 0.98

13 13 1.2e-06 0.00012 23.6 2.0 2 23 494 516 494 516 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00027	0.028	16.1	1.0	1	21	49	69	49	70	0.96
2	13	4.5e-06	0.00046	21.8	0.9	1	23	175	198	175	198	0.97
3	13	7.2e-05	0.0075	18.0	0.6	1	23	204	226	204	226	0.99
4	13	1.1e-05	0.0011	20.5	2.9	1	20	232	251	232	253	0.95
5	13	3.6e-08	3.7e-06	28.3	0.5	1	23	264	286	264	286	0.97
6	13	1.2e-05	0.0012	20.4	1.5	1	23	296	318	296	318	0.99
7	13	6.2e-06	0.00064	21.3	1.2	1	23	324	346	324	346	0.99
8	13	0.00098	0.1	14.4	0.4	1	23	352	374	352	374	0.99
9	13	3.1e-06	0.00032	22.2	3.4	1	23	380	402	380	402	0.95
10	13	0.00071	0.073	14.8	2.4	1	23	408	431	408	431	0.96
11	13	4.6e-05	0.0047	18.6	0.4	1	23	437	459	437	459	0.94
12	13	3.2e-06	0.00033	22.2	4.0	1	23	465	487	465	487	0.98
13	13	1.2e-06	0.00012	23.6	2.0	2	23	494	516	494	516	0.97

Sequence Information

Coding Sequence: ATGAATTGTGGAGCAAGTTGTAGGTTATATCTTTACTGTGTTGAAGATGTCTCCACTAAAGTGGAAACGAGGAGGCAGTCTATGCTGAACGAGAGAAACAAGAGACTGAAGGAAGAGGCGGCACCGGCCAAACCTTTGGAGACTCACAAGTGTCCCACATGTCTCAGGTCTTTCAACAGCTTGGCAGGCCTGAAACGGCACCTGAGGTTTTGTCGAGAGGTTTCCACTTTGAGCAAATCTGGCATCTTGGGTATCGGCAGTTCTCAGGAAAACGCTTCTGAATTTGAAGATGATGACCCACCGGAACAAGACCAGGACCTCAAGAGTACGGGAAATACTTCCGGTACAGCGAGCGCAGGTGCAGAGAGCGGCGGCGAGGCGCCTGACGTTGAAGACTTTTCTCCAAATGGACAAGAAATAATGGTGAACAAATTTCATGACATGATGGATGAAACATCTGTGGACCCAGGAAAGTGCCACTGCTGCGGTGAAGATTTAAACACGGCTCATGTGGGCGGCGAGTTCGAGTGTGCGGACTGCTCCAAGAACTTCAAGCTGAAGTCGAGCCTGGAGAGACACAGGCGTGTGGTTCACCTGGAAGGCGAGACTTACACCTGTCCCGTGTGCAGCGCGCGCTGTCCGGACAAGGGCACGCTCGCTCGGCACATGTACACACACACAGGTCTGAAGCCTTACTCCTGTAGCCGCTGCAAGAAAACCTTCAGCCGGAAGTACCACCTGGAGCGCCACGTGTTGCAGACAGGTTGTGACGGACAGACTAGGCCAAATTTCCCCTGCCAGGTCTGCGGCCGCGTGTTCACCCGAAAAGATAACCTGAGGCAGCACCTCCGGGCACACGCGGGGCAAGTGAAGCGCAAGAAGATGTACACTTGCGAACACTGCAATCGCGAGTTCCAAGGGGCGACTTTGCTGCAGATCCACATGCGAACACATACAGGTGAAAAACCTTACCGATGTGACTTCTGCCCGAAACGTTTCCCATCTAGCGGTGCCATGAAGAAGCACAGGAGAATGCACACAGGAGAGCGACCGTATGAATGCAAAGAGTGCATGGCAAAGTTTGCTGCAAAGGAGACTCTGAACCGGCACGTGAGGACACACACCGGCGTGAGGCCACACATCTGCCAATACTGTGGAAAGAGTTTCATCCAGTCGTCTCAGTTACGAGCCCACATCTTCCACCACACCGGTGAAAACGGCTTCACCTGCGTCCACTGCAGCAAGGCCTTTAACCGCAGGTCTCGACTGGTGATGCACGTCAAGTACGTCCACGAGGGAGCCAAACCCTTCGAGTGCGTCCAGTGCTCGAAGACGTTCGTGAGGAAGGAAGACCTGGCTCGCCACACCGTCCTGCACTCCGGAGTCAAAGCGCACAAGTGTCCCATTTGTCAGAAGTGTTTTGCCATGAAATCATCGCTCAAGATCCACCTTTTGACACATACAAAGGAACCGCCCAGATCCTGCGACGAATGTGGCCGCGCCTTCATCAGACAGGACTGCCTGCTGCGTCACATGCGTACGAAGCACAGGGACATGTTCGAGGAGATCCTGGCCGAGACCGAGAAGAAGAAGCTCCAGCTGCAACTGCTGGCCAACGCAGACAACAGCACGGACAGAGTTTCCGCCCAACCTGACCCTCTGTCCCTGAGCGAGGGCGTCCTGGCAGACTCCATCAAGGAACTGCTCACGTTGCTGGTGGACGAGGCCACGCTGAAGGCCTTCGGTTGGCCTGAAACCAGGGTGGACACGCTGCTGGAGGCGGTCATCAACCGTTGCGGCCACCAGCCGGTTTTCTCTGAAGACCTGTCTTACACGGACCGCCTGCGGGAGAATGCAAAGCTGCTGTTCACCGTAGTGATAGACGATTCCGCGGTAAAGACGCTGCTCAATAACCAGACCGTGGATGAAGTTATCCTCCACGTTCTGCGGCTGGCCAAGTCTTAA
Protein Sequence: MNCGASCRLYLYCVEDVSTKVETRRQSMLNERNKRLKEEAAPAKPLETHKCPTCLRSFNSLAGLKRHLRFCREVSTLSKSGILGIGSSQENASEFEDDDPPEQDQDLKSTGNTSGTASAGAESGGEAPDVEDFSPNGQEIMVNKFHDMMDETSVDPGKCHCCGEDLNTAHVGGEFECADCSKNFKLKSSLERHRRVVHLEGETYTCPVCSARCPDKGTLARHMYTHTGLKPYSCSRCKKTFSRKYHLERHVLQTGCDGQTRPNFPCQVCGRVFTRKDNLRQHLRAHAGQVKRKKMYTCEHCNREFQGATLLQIHMRTHTGEKPYRCDFCPKRFPSSGAMKKHRRMHTGERPYECKECMAKFAAKETLNRHVRTHTGVRPHICQYCGKSFIQSSQLRAHIFHHTGENGFTCVHCSKAFNRRSRLVMHVKYVHEGAKPFECVQCSKTFVRKEDLARHTVLHSGVKAHKCPICQKCFAMKSSLKIHLLTHTKEPPRSCDECGRAFIRQDCLLRHMRTKHRDMFEEILAETEKKKLQLQLLANADNSTDRVSAQPDPLSLSEGVLADSIKELLTLLVDEATLKAFGWPETRVDTLLEAVINRCGHQPVFSEDLSYTDRLRENAKLLFTVVIDDSAVKTLLNNQTVDEVILHVLRLAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01565765;
90% Identity: iTF_01565765;
80% Identity: -