Basic Information

Insect: Eucriotettix oculatus
Gene Symbol: -
Assembly: GCA_034510155.1
Location: CM067379.1:1277656-1282613[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.1e-06 0.00011 23.7 0.7 1 23 68 90 68 90 0.99

2 13 2.2e-07 2.2e-05 25.9 0.7 1 23 96 118 96 118 0.99

3 13 3.6e-05 0.0037 18.9 1.9 1 23 124 146 124 146 0.98

4 13 6.3e-08 6.5e-06 27.6 1.4 1 23 152 174 152 174 0.99

5 13 2.9e-07 3e-05 25.5 0.6 1 23 180 202 180 202 0.98

6 13 2.5e-06 0.00025 22.6 0.8 1 20 208 227 208 230 0.94

7 13 5.2e-08 5.3e-06 27.9 0.6 1 23 261 283 261 283 0.99

8 13 4.8e-06 0.00049 21.7 0.9 1 23 289 311 289 311 0.97

9 13 6.2e-06 0.00064 21.3 2.6 1 23 317 339 317 339 0.98

10 13 2.1e-06 0.00022 22.8 0.1 1 23 345 367 345 367 0.99

11 13 1.4e-07 1.5e-05 26.5 1.9 1 23 373 395 373 395 0.98

12 13 0.12 12 7.8 0.2 1 13 401 413 401 415 0.89

13 13 6.8 7e+02 2.3 0.8 2 16 451 465 448 467 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.1e-06	0.00011	23.7	0.7	1	23	68	90	68	90	0.99
2	13	2.2e-07	2.2e-05	25.9	0.7	1	23	96	118	96	118	0.99
3	13	3.6e-05	0.0037	18.9	1.9	1	23	124	146	124	146	0.98
4	13	6.3e-08	6.5e-06	27.6	1.4	1	23	152	174	152	174	0.99
5	13	2.9e-07	3e-05	25.5	0.6	1	23	180	202	180	202	0.98
6	13	2.5e-06	0.00025	22.6	0.8	1	20	208	227	208	230	0.94
7	13	5.2e-08	5.3e-06	27.9	0.6	1	23	261	283	261	283	0.99
8	13	4.8e-06	0.00049	21.7	0.9	1	23	289	311	289	311	0.97
9	13	6.2e-06	0.00064	21.3	2.6	1	23	317	339	317	339	0.98
10	13	2.1e-06	0.00022	22.8	0.1	1	23	345	367	345	367	0.99
11	13	1.4e-07	1.5e-05	26.5	1.9	1	23	373	395	373	395	0.98
12	13	0.12	12	7.8	0.2	1	13	401	413	401	415	0.89
13	13	6.8	7e+02	2.3	0.8	2	16	451	465	448	467	0.86

Sequence Information

Coding Sequence: ATGTTTGATTCGCACTCGGGTAAAACATCACCCCGGTTTGTTGAGCATGACGAAACGTTCACCACTTCGAGCGCTTCTGGAGACTGCGGCGGAATGGTTGGTGCAGGCGGAAAAGCCTCTAAACGCGTTGAGTACGATAAAACTTGCAAAGATTCCTCGGACCTGACGGACCGCGGGAGGATCCGTACAGGTGAGAAGCCAttcaaatgtgtcgagtgtgacaCGAGCTTCACCAAGTTGGCAACCTTAGAGAGGCACATGAAGGTCCACACCGGCGAGAAGCCGTTCAAATGTGCCGAGTGCAATAAAACGTTTGCGAGGTCGTCCGTACTGAACTCTCACATGAGGATCCACACGGGCGTGCGGCCTTTCAAATGTGTCGAGTGCGGCAGGACTTTCTCGATACTGTGCAACCTGGAACGGCACTCGAGGATTCACACAGGCGAGAGGCCATATAAGTGTACCGTGTGCGATAAGACTTTCATCCGTTCCTCCGACCTGAAGATGCACACGAGGATTCACACCGGGGAAAGGCCGTTTAAATGCACCGAGTGTGATAAGACTTTCATCGGTTCCACTGAGCTAAAGAGGCACATAATGGTTCACACGGGCAAGAAGCCGTTTGAGTGTGCGGAATGCGGTAAAACGTTTGCAAGGTATTCTCATCTCAAACTGCACATGTGGATTCATGCCGCAGAAAAGCCGTTTAAGAGCGTCAAGCAACTCGCACGTTTGGCCACCTCGGAGAGACGCGTCAAGGTTCTTGCTGGAgtgaagccttttaaatgtgccGAGTGCGACAGGAGTTTCACGCAGTCGGCCACCTTGGAGAGGCACATGAAGGTTCACACAGGCGAGAAGCCGTTTGCATGCGTGGAGTGTGGTAGAAGTTTCACGCAGCTGTGCAACTTGGAAAGGCACGCCAAGGTCCACACGGGCGAGAAGCCGTTCGAATGCGTCGACTGCGGCAAGACGTTCGCAAGCTGCCACCAGTTGAAGCTGCACGCGAGGGTTCACACCGGCGAGAGACCATACAGGTGCGTCGAGTGCGACAAGAGTTACATAGGTTCCTCCGACCTGAAGATCCACATGGCAACCCATACGGACGAAAAGCCCTTCAGGTGCGTAGAGTGCGACAAGACGTTTGCGAGGCGCTCTCACCTCAAAGTGCACGTGAGGAtccacacaggtgaaaagccctTCAGATGTGTCGGGTGCGACAAGCGGTTCCCCCGACTGCGGGCGGGAGCGCCGTCGGGCGCGCTCGCCGCGGTGGCGTCGTTCCGCTGGGGCGCGCCGCCTTTCTCTCAGGCGCCGCGTCTTCTCTCCGCGGCGCTTTCGCGCTGCTCCTCCTGCGCTCGCTGCCAAGCGGTCTTTCGCTCATCGCGCTTGCTCTCCTCACTCTGGCTGGAGCGCAGTCGAACTGACGATTGGGATGGGCCGAGAGAGGAGCGACGAGACAAAGACAACATAGCAGCCCACCACAGCCACCGAAGGCAACCGCCACCCACTGTGCCCGCGGAAAACAGTGATCGAAGTCCAGCCCCCCCCAACCCGCAAAACTCTCAAGGTCTCCACCACCATCCCCGGGTGGCCGACAACCACTGTTGCCTCCCGTACCGTCCACCCCGATTCAGCCATGACGTTTCGCCCCTGTATTCTACCATCTTCACTCGTTTAGAGGCGCTCAAGCTTCGTTAA
Protein Sequence: MFDSHSGKTSPRFVEHDETFTTSSASGDCGGMVGAGGKASKRVEYDKTCKDSSDLTDRGRIRTGEKPFKCVECDTSFTKLATLERHMKVHTGEKPFKCAECNKTFARSSVLNSHMRIHTGVRPFKCVECGRTFSILCNLERHSRIHTGERPYKCTVCDKTFIRSSDLKMHTRIHTGERPFKCTECDKTFIGSTELKRHIMVHTGKKPFECAECGKTFARYSHLKLHMWIHAAEKPFKSVKQLARLATSERRVKVLAGVKPFKCAECDRSFTQSATLERHMKVHTGEKPFACVECGRSFTQLCNLERHAKVHTGEKPFECVDCGKTFASCHQLKLHARVHTGERPYRCVECDKSYIGSSDLKIHMATHTDEKPFRCVECDKTFARRSHLKVHVRIHTGEKPFRCVGCDKRFPRLRAGAPSGALAAVASFRWGAPPFSQAPRLLSAALSRCSSCARCQAVFRSSRLLSSLWLERSRTDDWDGPREERRDKDNIAAHHSHRRQPPPTVPAENSDRSPAPPNPQNSQGLHHHPRVADNHCCLPYRPPRFSHDVSPLYSTIFTRLEALKLR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -