Basic Information

Insect: Eucriotettix oculatus
Gene Symbol: -
Assembly: GCA_034510155.1
Location: CM067376.1:623255-626077[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 5.6e-05 0.0058 18.3 0.4 2 23 11 32 10 32 0.97

2 28 0.023 2.3 10.1 1.3 3 23 40 60 38 60 0.97

3 28 5.5e-05 0.0057 18.3 1.8 1 23 65 87 65 87 0.99

4 28 2.4e-07 2.5e-05 25.8 0.9 2 23 91 112 90 112 0.97

5 28 0.00025 0.026 16.2 2.9 3 23 164 184 162 184 0.92

6 28 0.00016 0.016 16.9 1.5 2 23 191 212 191 212 0.98

7 28 7.5e-05 0.0077 17.9 1.1 1 23 246 268 246 268 0.98

8 28 0.00011 0.011 17.4 5.7 1 23 274 296 274 296 0.97

9 28 1.6e-06 0.00017 23.1 0.3 1 22 302 323 302 323 0.97

10 28 0.023 2.3 10.1 3.4 1 23 353 375 353 375 0.98

11 28 0.82 84 5.2 4.8 2 23 382 403 382 403 0.96

12 28 0.00047 0.049 15.4 1.1 2 23 438 459 437 460 0.95

13 28 1.5e-05 0.0015 20.1 3.6 1 23 465 487 465 487 0.97

14 28 0.00015 0.015 17.0 1.7 1 23 493 515 493 515 0.99

15 28 0.027 2.8 9.9 2.7 3 21 523 541 521 543 0.94

16 28 0.00039 0.041 15.6 3.2 1 23 549 571 549 571 0.98

17 28 0.76 78 5.3 0.2 2 18 578 594 577 594 0.90

18 28 0.0032 0.33 12.8 3.3 1 23 605 627 605 627 0.97

19 28 0.18 19 7.3 3.2 2 23 634 655 634 655 0.96

20 28 0.36 37 6.3 0.8 3 23 691 711 690 711 0.92

21 28 7.5e-06 0.00077 21.1 0.3 1 23 717 739 717 739 0.98

22 28 0.00033 0.034 15.9 0.3 1 23 745 767 745 767 0.98

23 28 8.8e-06 0.0009 20.8 0.7 2 23 774 795 773 795 0.93

24 28 0.012 1.2 11.0 3.0 3 23 803 823 802 823 0.98

25 28 8.4e-06 0.00087 20.9 1.4 1 23 829 851 829 851 0.98

26 28 6.6e-06 0.00068 21.2 1.3 1 23 857 879 857 879 0.99

27 28 1.2e-07 1.2e-05 26.7 0.8 1 23 885 907 885 907 0.99

28 28 0.0085 0.87 11.4 0.7 1 20 912 931 912 933 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	5.6e-05	0.0058	18.3	0.4	2	23	11	32	10	32	0.97
2	28	0.023	2.3	10.1	1.3	3	23	40	60	38	60	0.97
3	28	5.5e-05	0.0057	18.3	1.8	1	23	65	87	65	87	0.99
4	28	2.4e-07	2.5e-05	25.8	0.9	2	23	91	112	90	112	0.97
5	28	0.00025	0.026	16.2	2.9	3	23	164	184	162	184	0.92
6	28	0.00016	0.016	16.9	1.5	2	23	191	212	191	212	0.98
7	28	7.5e-05	0.0077	17.9	1.1	1	23	246	268	246	268	0.98
8	28	0.00011	0.011	17.4	5.7	1	23	274	296	274	296	0.97
9	28	1.6e-06	0.00017	23.1	0.3	1	22	302	323	302	323	0.97
10	28	0.023	2.3	10.1	3.4	1	23	353	375	353	375	0.98
11	28	0.82	84	5.2	4.8	2	23	382	403	382	403	0.96
12	28	0.00047	0.049	15.4	1.1	2	23	438	459	437	460	0.95
13	28	1.5e-05	0.0015	20.1	3.6	1	23	465	487	465	487	0.97
14	28	0.00015	0.015	17.0	1.7	1	23	493	515	493	515	0.99
15	28	0.027	2.8	9.9	2.7	3	21	523	541	521	543	0.94
16	28	0.00039	0.041	15.6	3.2	1	23	549	571	549	571	0.98
17	28	0.76	78	5.3	0.2	2	18	578	594	577	594	0.90
18	28	0.0032	0.33	12.8	3.3	1	23	605	627	605	627	0.97
19	28	0.18	19	7.3	3.2	2	23	634	655	634	655	0.96
20	28	0.36	37	6.3	0.8	3	23	691	711	690	711	0.92
21	28	7.5e-06	0.00077	21.1	0.3	1	23	717	739	717	739	0.98
22	28	0.00033	0.034	15.9	0.3	1	23	745	767	745	767	0.98
23	28	8.8e-06	0.0009	20.8	0.7	2	23	774	795	773	795	0.93
24	28	0.012	1.2	11.0	3.0	3	23	803	823	802	823	0.98
25	28	8.4e-06	0.00087	20.9	1.4	1	23	829	851	829	851	0.98
26	28	6.6e-06	0.00068	21.2	1.3	1	23	857	879	857	879	0.99
27	28	1.2e-07	1.2e-05	26.7	0.8	1	23	885	907	885	907	0.99
28	28	0.0085	0.87	11.4	0.7	1	20	912	931	912	933	0.94

Sequence Information

Coding Sequence: ATGGACCTGCACGACGAAGAGAAGTGTGTCAAATGTAGCGAATGCGAGATGACGTTCCCAGAATATAGCAGCTTGAAGAGACACTTGAAGGTTCACTCTGCCGACAGGCCATACGGCTGCGTGAAATGCTTCAAGTTATTTCCCGACTTTAGCAGTTACAGGCAACACATGTCGAAGCATGTTGATAAGCCGTACAAGTGCGGTAAATGTTACAAGAGCTTCCAAACTTCGATCGCTTTAAAAATGCACCTTAGAAGTCACTCGGCTCTAAGGTGCGATATTTGTGATAAGACGTTTTCAAAGTCTGTTGGTTTGAAAAGCCACATGAGGACTCACTTGTATGGACAGACTCAAAAATGTGTTGAAAGTTTCACAGATTCTGTCCAATTTGAAAGTTGTGCGGCAGAAAATGTTCGAAAGCCTGGCAGAACCGTTTCTCATTCCGGTAAGAGGCGTGGAACTTTATGTGCCGGTAAAAAGGcacaaaaatgtattacttGTGATAAAACTTTCATAAGGCGttgcaatttaataaatcacatgAAGATCCACTCGCGCCAAAATATTCGAAAGTGCGTCAAGTGTGGTAAAACGTTCAGGGACGGTACCGAATTCAGAAATCACTTGAATTCTCACGCTGCTGTTGAATCGTTCAAATGGGTCGAGTGTACCGTGCAGTTGCCCGGTGGGAGCAGTCTTACAGTTCCCATGAAAGTTAACACCGGAGAGAAAGTGCACCAATGCGTTACATGTTTGAAAGTATTCTCGCTACCTCAATCTCTGATTAGACATATGATGACACACGACCGAATAAAGAAGTATTGTTGTGTCCAGTGCGATAAAGCGTTCTATTACTCGGCCAGTTTGAAGAAACACATGAGACATCATGTGGATGAAAAATTTTACCAATGTGTTACctgtgataaaacatttgtcAGGGCAGCTAGTTTGAGAAACCACATGAGGAGGGTTCGGAAACGTCGCAAGTGTAACGAACCGTTTTCAGGCGctggcaaaattaaaaaaaaaaaaaattctaacacTGATGGAGAATCGTACAAGTGTGTCACTTGCgacaaagaattttttaagaTCAGCAGTTTGATGTGCCATATGAAAATCCACTCGCGCAAAAGGATTCGGAAGTGTGTCAGGTGTTGTAAAACATTTACAGATACTACGGAATTCAGAAATCACGTGAATTCCCACTCCGCCGAACAATCGTTCAAGTGGGTCGAGTGTACCGTAAGGTTGTCCCCTACGAGTACTCTCACGGTCCCCATGAAAGTTTACACCGAAGAGAAAGTCAATCAGTgcgttaaatgtttaaaaattttcccacaAGCTAATTCTCTGATCAGACACATGGAGAGACACCATGAGATACACAAGTATTGTtgtgtcgagtgtgataaaGCGTTCTATTACGCATTCAGTTTGCGGAAACACATGAGACGCCACATGGATGgtaaattgtataaatgtgTCACCTgtggtaaaacattttttaaggcTCTTAAATTGAGGAACCATTTGAAAATCCACTTGAACAAAATGACCCAAATATGTGTAGAGTGTAATGCAACATTTTCAGATTCCAGGAAATTTAACAGTCACATGAAGTGTCACACGGAGGGGAAGTCGCACCAGTGTAATATTTGCGATAAAATCTTTTTCAAGTCTGATATTTTGAGGAAGCACCTCAAAACTCACTTTTGTAAAACCGCTGGAAAGTGCGACACTTGTGATAAAACTTTAACAGGTTCCGGTAATTTTATGAGACGTTCAAGTTCTCCTGCTGACAAGAAAACATACAAATGCATCACTTGTGATGAAAAGTTTTCCAAGTCCTGTAGTTTATTAAACCACATGAAAATCCACTCGCGCAAGATGATTCGAAGGTGTGTCAAGTGCTGCGAAACGTTTACAAACGCCACTGAGTTCAGAAACCACGTGAATTCTCACTCCGCCGAGGAATCTTTCAAGTGGGTCGAGAGTACCGTACGGTTATCTGCTACGAGTAGTATCACAATCCCCATGAAAGTTTACACCGCAGAGAAAATAAACCAGtgcattaaatgttttaaaatcttGTCACAAGCGAAATATTTGAGCAGGCACCTGACGATACACGGCGAAGACAAGAACTATTTTTGTGTGGAGTGCGATAAGGGATTTTACGACTCAAACGGTTTGTTAAGGCACATGAGGGTTCACACCGGCAACATGCCATATGAATGTTTTGTgtgtgggaaaatattttttgacctGGGTGGCTTTGCGAAGCACACGAAGATACACACCGGCGTGAGGAAACAAAAATGCATAGAATGCGACAAAACTTTTTCCGATTCAAGTAGCCTCGCCAAGCACATGCAACTCCACACtggcgaaaaatatttttggtgtcTCGAGTGTAATAAAGATTATGGACGCATAAGTCACCTGAAAGGTCACATGAGGCATCACACAGGTGAAAGACGTTACCACTGTGTCGAGTGTAACAAAGGTTTCGCAAGTTCCAGTTATTTAGTGAGCCACCTGAGGACTCACACAGGGGAAAAGCCATTCAAATGCAAAAAGTGCGTCAAGTCATTTGCAATATTAAGTGGTTTAACGAAGCACATGAGGATGCATACCGGCCTGAGACCGTACGTCTGTGCTGAATGTGATAAAACGTTTGCGGATAACAGTAATTTCAAAAATCACCTGAAGACCCACGGTGGAATGCCGCATAAATGTGTTGACTGTGATAAAGGTTTTATATCTTTGAAAAGATTAGTGAGGCATAAAGATAAATGTAAAGGATCCGCAATGGGATAA
Protein Sequence: MDLHDEEKCVKCSECEMTFPEYSSLKRHLKVHSADRPYGCVKCFKLFPDFSSYRQHMSKHVDKPYKCGKCYKSFQTSIALKMHLRSHSALRCDICDKTFSKSVGLKSHMRTHLYGQTQKCVESFTDSVQFESCAAENVRKPGRTVSHSGKRRGTLCAGKKAQKCITCDKTFIRRCNLINHMKIHSRQNIRKCVKCGKTFRDGTEFRNHLNSHAAVESFKWVECTVQLPGGSSLTVPMKVNTGEKVHQCVTCLKVFSLPQSLIRHMMTHDRIKKYCCVQCDKAFYYSASLKKHMRHHVDEKFYQCVTCDKTFVRAASLRNHMRRVRKRRKCNEPFSGAGKIKKKKNSNTDGESYKCVTCDKEFFKISSLMCHMKIHSRKRIRKCVRCCKTFTDTTEFRNHVNSHSAEQSFKWVECTVRLSPTSTLTVPMKVYTEEKVNQCVKCLKIFPQANSLIRHMERHHEIHKYCCVECDKAFYYAFSLRKHMRRHMDGKLYKCVTCGKTFFKALKLRNHLKIHLNKMTQICVECNATFSDSRKFNSHMKCHTEGKSHQCNICDKIFFKSDILRKHLKTHFCKTAGKCDTCDKTLTGSGNFMRRSSSPADKKTYKCITCDEKFSKSCSLLNHMKIHSRKMIRRCVKCCETFTNATEFRNHVNSHSAEESFKWVESTVRLSATSSITIPMKVYTAEKINQCIKCFKILSQAKYLSRHLTIHGEDKNYFCVECDKGFYDSNGLLRHMRVHTGNMPYECFVCGKIFFDLGGFAKHTKIHTGVRKQKCIECDKTFSDSSSLAKHMQLHTGEKYFWCLECNKDYGRISHLKGHMRHHTGERRYHCVECNKGFASSSYLVSHLRTHTGEKPFKCKKCVKSFAILSGLTKHMRMHTGLRPYVCAECDKTFADNSNFKNHLKTHGGMPHKCVDCDKGFISLKRLVRHKDKCKGSAMG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -