Eocu000090.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eucriotettix oculatus
Gene Symbol
-
Assembly
GCA_034510155.1
Location
CM067376.1:804475-806157[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 8e-08 8.3e-06 27.3 0.8 1 23 3 25 3 25 0.99
2 20 8.8e-05 0.009 17.7 0.1 3 23 33 53 31 53 0.94
3 20 3.4e-07 3.5e-05 25.3 2.0 1 23 59 81 59 81 0.98
4 20 0.014 1.4 10.8 3.6 1 23 87 109 87 109 0.96
5 20 6e-06 0.00062 21.4 2.9 1 23 115 137 115 137 0.99
6 20 7.5e-07 7.7e-05 24.2 1.0 1 23 143 165 143 165 0.99
7 20 9.4e-07 9.7e-05 23.9 0.1 1 23 171 193 171 193 0.98
8 20 5.9e-07 6.1e-05 24.5 0.2 1 23 199 221 199 221 0.98
9 20 0.00027 0.028 16.1 0.3 1 23 227 249 227 249 0.99
10 20 8.6e-06 0.00088 20.9 0.1 1 23 255 277 255 277 0.99
11 20 2.4e-06 0.00025 22.6 0.9 1 23 283 305 283 305 0.98
12 20 8.3e-05 0.0085 17.8 3.6 1 23 311 333 311 333 0.95
13 20 1.1e-06 0.00012 23.6 0.2 1 23 339 361 339 361 0.99
14 20 8.4e-06 0.00087 20.9 3.7 1 23 367 389 367 389 0.97
15 20 1.8e-07 1.8e-05 26.2 0.7 1 23 395 417 395 417 0.99
16 20 3.9e-06 0.0004 22.0 3.4 1 23 423 445 423 445 0.99
17 20 2.2e-05 0.0023 19.6 0.1 2 23 452 473 451 473 0.96
18 20 0.00066 0.068 14.9 1.4 1 23 479 501 479 501 0.98
19 20 0.00056 0.057 15.2 0.2 1 23 507 529 507 529 0.99
20 20 3e-05 0.0031 19.1 4.0 1 23 535 557 535 557 0.99

Sequence Information

Coding Sequence
ATGCCATACAGATGTGAGGAGTGTGAGAAAACGTTTTCAGACAAGTATGTGTTGATtagacacatgaggattcactcTGGCATCAAGACATGGGCATGTGCAGCGTGCGGTAAATCATTCTACGACCAAAATGATTTGAAGGTTCATTTTCGTATTCACTCGGGGGAAAAGCCGTTCAATTGTGTCGAGTGCGATACAAGCTTCAGACAAAGGAGTCACTTAATGgtgcacatgaggattcacactggtgaaaaaccatacaaatgtgatgAGTGCGAAAAAACTTTCACctgtaaaataagtttaatcGGACACAAGAGGTTTCACGCTGGCGAAAGTCCGTACAGATGTCTCGAGTGCAACGcgcattttacattaaaaagtcAGCTTAATaaacacatgagaattcatagCAGCGAAAACCCTTACAAATGTTCTGAATGCGATACAATATTCTCGTATAAAAGTTCATTACTAAGTCACTTGAGAATTCACAGGGGTAAACAACCATTCACATGTGCGGCGTGTGGTAAAACGTTCCCTCAACAGAGTGCTTTGACGATGCATATTCGGATTCACACAGGAGAAAGGCCATTTatttgtgttgagtgtgatacaaGCTTCATTCAAAGAAGCCAATTAATTGCACACCTGAGGACTCACAACAGCGAAAAATCATACAAATGTGATGCGTGCGAATCAGCGTTCTcggaaaaaaatactttaattaaccacatgaggattcacactggtgaaaaaccttacAAATGTGATGAGTGTGATGCAGCTTTCTCACAGATAGGTGGATTAATCAGGCACAGgagaattcacacaggtgagaaaCCATTCACGTGTGcagagtgtgataaaacattcaccAACCAAACTTCATTTAGGATACATGTTCAGATTCACACTGGAGAAAGGCCATACAGCTGCATTAACTGCAATAAGAATTTCTCTCAGAAAGCATGCTTAAAAaatcacatgaggattcacactggtgaaaaaccttacCAATGTGTGGAGTGTGgtacaaatttttcattgaacAGTTCTTTGATTAAGCACATGATGGTTCACACAGGTGAGAAACCACACAAATGTGAAGAATGTGAGAAAAGATTCACGAGAAAATTGTACCTAACTAGACACATGGCGAATCACTCTCGTGAAATGGTATACAGATGTGATGAGTGCGATATCGGTTTCTCACAGAAAGGCCAATTTAAtaaacacatgaggattcaccgTGGTGAAAATCCTTACAAATGTAATGAATGTGATTCTACTTTCTCGCATAAAAGTTCATTAATCAGTCATAAGAGAATCCACAGCGGTAAAGAGCTACTTATATGCACAGTGTGCGGAAAAATCTTCCCCGATAAAACCGTTTTGAAGAATCACGTCCGGGTTCACACGGGAGAAAAGCCGTATAGCTGCGGCAGGTGCAATATGAATTTCTTGGATCAAAGTCGATTAAGGaagcacatgaggattcacaacagtgaaaaaccttacaaatgtgttgaatgtggtAGAAGTTTCTTACAAAATGGTATTCTAATTAAGCACATGaagattcacactggtgataaGCCTTATAAATGTGCAGTGTGTGGTAAGTCATTCTTTCACCAAAACAGTATCAGAAGGCACTACCAGACTCACGCTGGAGAGTGA
Protein Sequence
MPYRCEECEKTFSDKYVLIRHMRIHSGIKTWACAACGKSFYDQNDLKVHFRIHSGEKPFNCVECDTSFRQRSHLMVHMRIHTGEKPYKCDECEKTFTCKISLIGHKRFHAGESPYRCLECNAHFTLKSQLNKHMRIHSSENPYKCSECDTIFSYKSSLLSHLRIHRGKQPFTCAACGKTFPQQSALTMHIRIHTGERPFICVECDTSFIQRSQLIAHLRTHNSEKSYKCDACESAFSEKNTLINHMRIHTGEKPYKCDECDAAFSQIGGLIRHRRIHTGEKPFTCAECDKTFTNQTSFRIHVQIHTGERPYSCINCNKNFSQKACLKNHMRIHTGEKPYQCVECGTNFSLNSSLIKHMMVHTGEKPHKCEECEKRFTRKLYLTRHMANHSREMVYRCDECDIGFSQKGQFNKHMRIHRGENPYKCNECDSTFSHKSSLISHKRIHSGKELLICTVCGKIFPDKTVLKNHVRVHTGEKPYSCGRCNMNFLDQSRLRKHMRIHNSEKPYKCVECGRSFLQNGILIKHMKIHTGDKPYKCAVCGKSFFHQNSIRRHYQTHAGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-