Eocu043753.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eucriotettix oculatus
Gene Symbol
-
Assembly
GCA_034510155.1
Location
JAEMUL010000011.1:517542-521832[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 1e-06 0.00011 23.8 1.0 1 23 127 149 127 149 0.99
2 21 3.5e-07 3.6e-05 25.2 2.2 1 23 155 177 155 177 0.99
3 21 9.4e-05 0.0097 17.6 0.3 1 23 183 205 183 205 0.98
4 21 2e-07 2.1e-05 26.0 4.1 1 23 211 233 211 233 0.99
5 21 0.00034 0.035 15.8 0.2 1 23 239 261 239 261 0.98
6 21 2.4e-09 2.5e-07 32.1 2.6 1 23 267 289 267 289 0.99
7 21 3.5e-07 3.6e-05 25.3 2.0 1 23 295 317 295 317 0.99
8 21 6.2e-06 0.00064 21.3 0.2 1 23 323 345 323 345 0.98
9 21 1.5e-06 0.00015 23.2 3.6 1 23 351 373 351 373 0.99
10 21 8.1e-05 0.0083 17.8 1.8 1 23 379 401 379 401 0.99
11 21 1.9e-08 2e-06 29.2 1.4 1 23 407 429 407 429 0.99
12 21 5.6e-06 0.00058 21.4 1.7 1 23 435 457 435 457 0.98
13 21 1.8e-05 0.0019 19.8 0.2 1 23 463 485 463 485 0.97
14 21 0.00011 0.011 17.4 4.1 1 23 491 513 491 513 0.98
15 21 2.9e-06 0.0003 22.3 1.1 1 23 519 541 519 541 0.98
16 21 4.3e-09 4.5e-07 31.2 1.9 1 23 547 569 547 569 0.99
17 21 2.5e-05 0.0026 19.4 1.9 1 23 575 597 575 597 0.98
18 21 2.6e-05 0.0026 19.4 1.1 1 23 603 625 603 625 0.97
19 21 0.00014 0.014 17.1 2.9 3 23 633 653 631 653 0.95
20 21 3.4e-06 0.00036 22.1 1.3 1 23 659 681 659 681 0.98
21 21 1.6e-08 1.7e-06 29.5 0.6 1 23 687 709 687 709 0.99

Sequence Information

Coding Sequence
ATGCGAACACAGAGGGCTATTGCTTTTAAACGCACACACACTACACCGCAGCAGCTGCAGCTCAAGGTGAGATACTGCAAGATAAATGTCTCTTTATTCTGGACTCCATCCTCCTCACATCGTCACAAGCACGCTctaaaggaggaggaggacgacgacgacgtaggcctaaagacccctgCTTCGCCAAAAAAACCTCCACGAGTCCCAAAACTTCTCAAGAGGCACGTAAGAAGTCTCCGTAGTTCAAGTTCTTCAAAACGAGTGGGGCCGTGCCGGTGGAAGGCTTGGCACCGGTGTGATTTTTTTGTGCGTGAAACATTTTCGTTATTGGGAAACTTTACGAGTCGTGCGATGATCCGCGCCGGCAAAAAGCCTTACGAATGTCCCGAGTGTGAGCAAAAGTTCCCTTCGGCGACTCACGTAACTAGACATATGAGAACTCATACCGGCGAGAAACCATACAAGTGCGTTACTTGTGGTAAATCATTCTCCGAATCGGGTCACCTTAAGTCACACATGAAGATTCACAGCGGGGAAAAGCCGTTTGAATGCGTCGAGTGTGGCTCGTCATTTATTCGTTCAAATCGACTAAAAGTTCACATGCTGAGTCACACTGGCGAAAGGCCGTACCGGTGCTTTGTGTGCGGTAAAACTTTTACTCACTCTACGGGCTTGACAAAGCACATGAGGAGTCACACCGGCGAAAAGCCGTACGAGTGCGTGTTTTGTAGTAAGCTCTTTTCTGTTGGAAGTAATTTAGCAGACCACATGCGGatccacactggtgaaaagccttaCGAATGCTCCGAGTGTGGGAAAACGTTCATCACATCGAGCCACCTGAATAGACACATGAGAagtcacactggtgagaaaccatacaggTGCGTTACCTGTGGTAAATCGTTTTCCGAATCGGATCACCTTAACTCGCACATGAAGATTCACAGCGGGGAAAAACCGTTTGAATGCGTCGAGTGTGGCTTATCGTTTATTCGTTCAAACAAACTAAAAGTTCACATGCTCATTCACACTGGCGAAAGGCCATACCGGTGCTTTGAGTGCGGTAAAACTTTTTCTCATTCTACGGGCTTCACAatgcacatgagaattcacaccgGAGAAAAGCCGTACAAGTGTGTGTTTTGTAGCAAGTCCTTTTCTGTTGGAAGTCATTTAACGGAGCACGTGAGGAtacacactggtgaaaagccttaCGAATGTCCCGAGTGCGGGAGAAAGTTCATTACGTTGAGTCACCTGAATAGACAcgtgaggactcacactggtgagaaaccgtACGTGTGTGTTACTTGTGGTAAATCATTCACTGAATCACGTCACCTTGATACGCACATGAAGATTCACAGCGGGGAGAAGCCGTTTGTATGTCTTGAGTGTGGCTCGTCATTTATTCGTTCAAGTAAACTGAAAATTCACATGCTGGGCCATAGTGGCGAGAGGCCGCACCAGTGCTTTGAGTGTGGTAAAACCTTTTTTCATTCAACGGGCCTGACTGCGCACtcgagaattcacactggtgaaaagccacaCAAGTGTGTGTTGTGTGATAAGTCCTTTTCGGGTGGAAGTAATTTAAGGGAGCACATGAGGatccacactggtgaaaagccttaCCAATGTCCCGAGTGCGGGAGAAAGTTCATCACGTTGAGCCACTTGAATAGGCATATCAGGACGCAcgctggtgagaaaccatacaggTGCGTTACTTGCGGTAAACCGTTCTCTGAATCACGTCACCTTGACACGCACATGAAGCTTCACAGCGGGGAAAAGCCGTTTGTATGCGTCGAGTGTGGCTCGTCATTTATTCGTTCAAGTAAGCTAAAAATTCACATGCTGCACCACAGCGGCGAGAGGCCGCACCTGTGCTTTCAGTGCGGTAAAACGTTTGCTCATACTACGGGCTTAACCGCGCActtgagaattcacactggtggaAAGCCACACAAGTGCTTGTTGTGTGATAAGTCCTTTTCGGGCGGAAGTAATTTGAGGGAGCACATGAGGATCCACACCGGTGAAAAGCCTTACGAGTGTCCCGAGTGCGGGAAAAAATTCTCCACCTCGAGCGGCGTATCCAAACATATGAGGACTCACGCCGGCTACGACAAGCCGCCCAAATGTGGGACGTGA
Protein Sequence
MRTQRAIAFKRTHTTPQQLQLKVRYCKINVSLFWTPSSSHRHKHALKEEEDDDDVGLKTPASPKKPPRVPKLLKRHVRSLRSSSSSKRVGPCRWKAWHRCDFFVRETFSLLGNFTSRAMIRAGKKPYECPECEQKFPSATHVTRHMRTHTGEKPYKCVTCGKSFSESGHLKSHMKIHSGEKPFECVECGSSFIRSNRLKVHMLSHTGERPYRCFVCGKTFTHSTGLTKHMRSHTGEKPYECVFCSKLFSVGSNLADHMRIHTGEKPYECSECGKTFITSSHLNRHMRSHTGEKPYRCVTCGKSFSESDHLNSHMKIHSGEKPFECVECGLSFIRSNKLKVHMLIHTGERPYRCFECGKTFSHSTGFTMHMRIHTGEKPYKCVFCSKSFSVGSHLTEHVRIHTGEKPYECPECGRKFITLSHLNRHVRTHTGEKPYVCVTCGKSFTESRHLDTHMKIHSGEKPFVCLECGSSFIRSSKLKIHMLGHSGERPHQCFECGKTFFHSTGLTAHSRIHTGEKPHKCVLCDKSFSGGSNLREHMRIHTGEKPYQCPECGRKFITLSHLNRHIRTHAGEKPYRCVTCGKPFSESRHLDTHMKLHSGEKPFVCVECGSSFIRSSKLKIHMLHHSGERPHLCFQCGKTFAHTTGLTAHLRIHTGGKPHKCLLCDKSFSGGSNLREHMRIHTGEKPYECPECGKKFSTSSGVSKHMRTHAGYDKPPKCGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-