Eocu000202.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eucriotettix oculatus
Gene Symbol
-
Assembly
GCA_034510155.1
Location
CM067376.1:1693494-1713910[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 2.1e-07 2.2e-05 25.9 0.4 2 23 37 58 37 58 0.98
2 29 2.2e-07 2.3e-05 25.8 0.2 1 23 64 86 64 86 0.99
3 29 6.3e-06 0.00065 21.3 2.0 1 23 92 114 92 114 0.99
4 29 1.3e-07 1.3e-05 26.6 1.0 1 23 120 142 120 142 0.99
5 29 2e-07 2.1e-05 26.0 2.5 1 23 148 170 148 170 0.98
6 29 1.1e-05 0.0011 20.6 0.3 1 23 176 198 176 198 0.98
7 29 4.6e-07 4.8e-05 24.9 1.5 1 23 204 226 204 226 0.98
8 29 1.9e-07 1.9e-05 26.1 1.7 1 23 232 254 232 254 0.99
9 29 0.0027 0.28 13.0 4.6 1 23 260 282 260 282 0.98
10 29 2.2e-07 2.3e-05 25.9 4.9 1 23 288 310 288 310 0.99
11 29 3.4e-07 3.5e-05 25.3 1.7 1 23 346 368 346 368 0.99
12 29 2.6e-07 2.7e-05 25.6 3.1 1 23 374 396 374 396 0.99
13 29 1.7e-08 1.8e-06 29.4 0.8 1 23 402 424 402 424 0.99
14 29 0.0001 0.011 17.5 2.8 1 23 430 452 430 452 0.98
15 29 2.1e-08 2.2e-06 29.1 2.9 1 23 458 480 458 480 0.98
16 29 2.2e-06 0.00023 22.7 1.8 1 23 486 508 486 508 0.98
17 29 1.5e-07 1.6e-05 26.4 4.3 1 23 514 536 514 536 0.98
18 29 2.9e-05 0.003 19.2 0.2 1 23 542 564 542 564 0.98
19 29 1e-07 1.1e-05 26.9 0.5 1 23 570 592 570 592 0.99
20 29 1.2e-06 0.00012 23.6 0.3 1 23 598 620 598 620 0.99
21 29 1 1.1e+02 4.9 0.3 13 23 623 633 621 633 0.91
22 29 0.0001 0.011 17.5 2.8 1 23 639 661 639 661 0.98
23 29 3.2e-08 3.3e-06 28.5 1.1 1 23 667 689 667 689 0.99
24 29 2e-07 2.1e-05 26.0 2.5 1 23 695 717 695 717 0.98
25 29 1.1e-05 0.0011 20.6 0.3 1 23 723 745 723 745 0.98
26 29 4.3e-07 4.5e-05 24.9 2.2 1 23 751 773 751 773 0.98
27 29 1.9e-07 1.9e-05 26.1 1.7 1 23 779 801 779 801 0.99
28 29 4.1e-07 4.2e-05 25.0 0.8 1 23 807 829 807 829 0.99
29 29 2.2e-07 2.3e-05 25.9 4.9 1 23 835 857 835 857 0.99

Sequence Information

Coding Sequence
ATGTACTCTGGTGGACAGACTTATGTAAGTGAAGAGCTTGGTATCACAGACCCTCAATATCCAAACTTGACAAACTGTGTGAAGATTCACGCAGACAGGAAACCAcgcaaatgtgttgagtgtgataaaacattcccATCTCCCTCAAGCTTAACAAatcacatgagaattcacactggcgAGAAACCATATGAATGTCTTGAATGTGCTAAAGCATTCTCACAATCCTCAAACTTAAACGtccatatgaggattcattctggtgagaaaccatacaaatgtgttgagtgcgATAAAACATTTGCAAGTTTCTTGCACCTAAGAAACCACAtcaggattcacactggtgagaaaccatacaaatgtgttgagtgcgataaaacattttcagaacCTTCTAACTTACGAAGGCACTTCAGGATTCACACTGGcgagaaaccatataaatgtgatGAGTGCGATAAATCATTCTCAAGTTCCTCTTACCTGATTAAACACACGAGATTTCACaatggtgagaaaccatacaattgtgtcgagtgtgataaaGCATTCTTGACTTCGTCACAGTTAACAATACACATGAGAATCCACACTCGTGAGAAACCTcacaaatgtgtcgagtgtgatatATCATTTTCAGATACTTCTAGCTTAACaagacacatgaggattcacactggtgagaaaccatacaaatgtgtcgagtgtgataaatatttttcaacatctTCTACCTTAACAAGACACTTGAGGATTCACACCGgcgagaaaccatacaaatgtgttgagtgtgataaaacattctcatgTTCCTCAGTTTTAACAAAACACACGAGGTTTCACTCTGGtcagaaaccatacaaatgtgttgagtgtgataaaacgtTCTCAAGTTCCTCACACCTAACACACCAcctgaggattcacactgACATAAGGATGTACTCCGGTGGACAAACGTACAAAAGTGAAGAGCTTGATACTGCAGACGCTCAAGCTTCAAACTTGACAAATCACGCTTCTGAGAAACcgtttaaatgtgttgagtgtgataaaacattctcaagtTTCTCATACCTGAGAAATCACATAAGGATTCACACTggcaagaaaccatacaaatgcgttgaatgtgataaaacattctgtaCTACTTCAGACTTAACAAAACACATAAGGATTCACACTGGTCAGAAACCATAcaagtgtgttgagtgtgataaaacattttcacaatcttCTAACTTAACAATCCAtttgaggattcacactggtgagaaaccttacaaatgtgttgaatgtgataaaacattttcagattaCTCGAGCTTAATATGCCACAGGAGGAtacacactggtgagaaaccatataaatgtgatgagtgtgataaatcattctcaAGTTCCTCTTACTTGACAAAACACATGAGATTTCACACTGGAGAGAAACCTTACAAATGTGTTGTgtgcaataaaatgttttcagaatctTCTAACTTACGAAGGCACTTCAAGATTCACACTGCtgagaaaccatataaatgtgatgagtgtgataaatcattctcaACTTCCTCATGCTTGATAAAACACATGAGATTTCACAATGGTCAGAAACCATACaattgtgttgagtgtgataaagcaTTCTTGACTTTGTCACAGTTAACAATACACATGAGAAtacacactggtgagaaaccatacaaatgtgtcgagtgtgacaTATCATTTTCAGATACTTCTAGCTTAACaagacacatgaggattcacactggtgagaaaccatacaaatgtgtcgagtgtgatatATCATTTTCAGATACTTCAGTCTTAACaagacacatgaggattcacaccgaatcTTCTAGCTTAACGacacacatgaggattcacactggtgagaaaccatacaaatgtgttgaatgtgataaaacattttcagattaCTCGAGCTTAATATGCCACaggaggattcacactggtgagaaaccatataaatgtgacgagtgtgataaatcattctcaGAACCTTCTAACTTACGAAGGCACTTCAGGATTCACACTGGcgagaaaccatataaatgtgatGAGTGCGATAAATCATTCTCAAGTTCCTCTTACCTGATTAAACACACGAGATTTCACAATGGTGAGAAACCCTACAATtgtgtcgagtgtgataaaGCATTCTTGACTTCGTCACAGTTAACAATACACATGAGAATCCACACTCGTGAGAAACCTcacaaatgtgtcgagtgtgatacATCATTTTCAGATACTTCTAGCTTAACaagacacatgaggattcacactggtgagaaaccatacaaatgtgtcgagtgtgataaatatttttcaacatctTCTACCTTAACAAGACACTTGAGGATTCACACCGgcgagaaaccatacaaatgtgttgagtgtgatacatCATTTTCAGTTACTTCTAGCTTAACaagacacatgaggattcacactggtgagaaaccatacaaatgtgttgagtgtgataaaacgtTCTCAAGTTCCTCACACCTAACACACCAcctgaggattcacactgGTCCTCGGGGAGCCGTAAACAAGGAAAGTAGGGATCCTTTACAGCTTCTCAGAGTTGAAGAGTGTGGCCACAGCTGGATAATGGTTTTGGAATCTGGAAAGGAAACAAGATGTAAAGGATTGCCTGGAAGGGTTGAACAGGTGCAAGGAGATTGGCATAGGAAAATCAGGGACCCCGCCTCGGCCATGTTACACAGGACAGGTACGACACCCCGGACAGCCTGGGAAGGTCGCAGGGGCAGAAGAGCCAGGATCCTTGATAGGAAGACAAACAGCGGGACTGATCAGAAGAGTGAGCGGGGTACAAGTCGAACCCCACCACTGCCACCTATGGACCAGGGCCAATGA
Protein Sequence
MYSGGQTYVSEELGITDPQYPNLTNCVKIHADRKPRKCVECDKTFPSPSSLTNHMRIHTGEKPYECLECAKAFSQSSNLNVHMRIHSGEKPYKCVECDKTFASFLHLRNHIRIHTGEKPYKCVECDKTFSEPSNLRRHFRIHTGEKPYKCDECDKSFSSSSYLIKHTRFHNGEKPYNCVECDKAFLTSSQLTIHMRIHTREKPHKCVECDISFSDTSSLTRHMRIHTGEKPYKCVECDKYFSTSSTLTRHLRIHTGEKPYKCVECDKTFSCSSVLTKHTRFHSGQKPYKCVECDKTFSSSSHLTHHLRIHTDIRMYSGGQTYKSEELDTADAQASNLTNHASEKPFKCVECDKTFSSFSYLRNHIRIHTGKKPYKCVECDKTFCTTSDLTKHIRIHTGQKPYKCVECDKTFSQSSNLTIHLRIHTGEKPYKCVECDKTFSDYSSLICHRRIHTGEKPYKCDECDKSFSSSSYLTKHMRFHTGEKPYKCVVCNKMFSESSNLRRHFKIHTAEKPYKCDECDKSFSTSSCLIKHMRFHNGQKPYNCVECDKAFLTLSQLTIHMRIHTGEKPYKCVECDISFSDTSSLTRHMRIHTGEKPYKCVECDISFSDTSVLTRHMRIHTESSSLTTHMRIHTGEKPYKCVECDKTFSDYSSLICHRRIHTGEKPYKCDECDKSFSEPSNLRRHFRIHTGEKPYKCDECDKSFSSSSYLIKHTRFHNGEKPYNCVECDKAFLTSSQLTIHMRIHTREKPHKCVECDTSFSDTSSLTRHMRIHTGEKPYKCVECDKYFSTSSTLTRHLRIHTGEKPYKCVECDTSFSVTSSLTRHMRIHTGEKPYKCVECDKTFSSSSHLTHHLRIHTGPRGAVNKESRDPLQLLRVEECGHSWIMVLESGKETRCKGLPGRVEQVQGDWHRKIRDPASAMLHRTGTTPRTAWEGRRGRRARILDRKTNSGTDQKSERGTSRTPPLPPMDQGQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-