Eocu019877.1
Basic Information
- Insect
- Eucriotettix oculatus
- Gene Symbol
- -
- Assembly
- GCA_034510155.1
- Location
- CM067377.1:213469158-213472682[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 36 0.0035 0.36 12.7 2.2 1 23 10 32 10 32 0.96 2 36 3e-06 0.00031 22.3 1.8 3 23 95 115 93 115 0.97 3 36 5.1e-05 0.0052 18.4 0.2 2 23 122 143 121 143 0.96 4 36 5.7e-07 5.8e-05 24.6 0.9 1 23 149 171 149 171 0.98 5 36 0.00012 0.012 17.3 0.3 2 23 178 199 177 199 0.97 6 36 1.7e-05 0.0018 19.9 3.6 1 23 204 226 204 226 0.98 7 36 1.4e-06 0.00014 23.4 0.8 2 23 233 254 232 254 0.97 8 36 5.1e-07 5.2e-05 24.7 0.5 1 23 260 282 260 282 0.98 9 36 7.5e-07 7.7e-05 24.2 0.4 2 23 289 310 288 310 0.97 10 36 0.00012 0.012 17.3 2.1 1 23 316 338 316 338 0.98 11 36 1.9e-05 0.0019 19.8 0.1 3 23 346 366 344 366 0.96 12 36 0.00068 0.07 14.9 4.0 1 23 371 393 371 393 0.97 13 36 4.8e-05 0.0049 18.5 0.6 3 23 401 421 399 421 0.96 14 36 2e-06 0.00021 22.8 0.6 1 23 427 449 427 449 0.98 15 36 4.7e-06 0.00048 21.7 0.2 3 23 457 477 455 477 0.96 16 36 6.8e-05 0.007 18.0 1.9 1 23 482 504 482 504 0.98 17 36 0.00026 0.026 16.2 0.7 2 23 511 532 510 532 0.97 18 36 0.00015 0.015 17.0 2.9 1 23 538 560 538 560 0.97 19 36 6.3e-06 0.00065 21.3 0.2 3 23 568 588 566 588 0.96 20 36 4.7e-06 0.00048 21.7 6.6 1 23 594 616 594 616 0.98 21 36 0.00022 0.023 16.4 0.2 2 23 623 644 622 644 0.96 22 36 0.00012 0.013 17.2 2.3 1 23 650 672 650 672 0.97 23 36 2.3e-05 0.0024 19.5 0.1 3 23 680 700 678 700 0.96 24 36 1.3e-07 1.3e-05 26.6 2.2 1 23 706 729 706 729 0.98 25 36 4.1e-06 0.00042 21.9 0.1 2 23 736 757 735 757 0.97 26 36 3.2e-05 0.0033 19.1 4.1 1 23 763 785 763 785 0.98 27 36 0.0023 0.24 13.2 1.6 1 23 838 860 838 860 0.97 28 36 2.5e-05 0.0026 19.4 0.4 1 23 921 943 921 943 0.98 29 36 2.1e-05 0.0022 19.6 0.2 2 23 951 972 950 972 0.96 30 36 3.8e-08 4e-06 28.3 3.1 1 23 978 1000 978 1000 0.99 31 36 1.2e-07 1.2e-05 26.7 0.7 1 23 1006 1028 1006 1028 0.98 32 36 0.0022 0.23 13.3 0.5 2 23 1035 1056 1034 1056 0.96 33 36 1.8e-05 0.0019 19.8 2.6 1 23 1062 1084 1062 1084 0.97 34 36 0.0002 0.021 16.5 0.6 1 23 1090 1113 1090 1113 0.94 35 36 6.2e-05 0.0064 18.2 0.4 3 23 1121 1141 1120 1141 0.98 36 36 0.0045 0.47 12.3 2.8 3 23 1149 1169 1147 1169 0.98
Sequence Information
- Coding Sequence
- ATGCAAACTTATACCCACCACAAACCTTTCCAGTGTATAGAGTGTGGTGCCTGTTTCAGGCGTCCACTCCCATTCAAAAGACACATGCGTTTCCATTTGAGGCGTCAGTTCTCCGATAGTTCAGATGAAGCCGAAATGTTCAGTGAAGTGGGTTTTACTTCCCACATGGAGGTACTTGAAGATTTTCCACCATTTGTGTTTGACGAAGCTGCAAAGGAACAGGATACCACTACGGAAGGTGAACAATGTGTTCGAACTTCCGCGGGTAATAAATCTGTGAACTGCTTACATTGTGATAGGGCATTTAAACACCCATCAGCTCTTGTAAAACATATGCGTGTTCACATAAAGCGTGAACCTTTAAATTGTTTAGAATGTGGAAAAAGTTTGAAGAATTCTGGAGCTCTAACCATGCACATGAAAGTTCATTCCATGGAAACACGCTATACTTGTGAAGAATGTGGGGAAAAGTTCAAGTACTCGGAGAGTCTCCTCAAGCACATGAGGCTACATAGGCAACCTCAGTACTTGTATTGTGAGGAGTGTGACAGATCTTTTAAATTGGCTGGAGCATACAAAATGCATATGAAATCACACACGTGGAAAGCCTATCATTGTGCTGAATGTGGTATGGCTTTTAAACATGTGGATCATCTAACTAAACACATTCGAGTTCATGTCAAACCGGAACCACTAGAGTGCCCTGAAtgtggaaaatgttttaaatttccaagtgttcttcgcCTTCACATGAAAGTACACTGTGTGAGCCCACCCTATTATTGTGCAGAGTGCGACCGAATATTTAAGAGACCTGATTACCTCAACAAACACATGCAAATTCATGAAAAGGCACAATCGACAACATGTGACGAGTGTGGTAAGTCTTTCAAAAATTCTGGTGCTCTCAGTATGCACATGAAGGTTCACTCTTTGCACCATCCTTACCATTGTGGTGAGTGTGGacagacatttaaatattctatttttctgaTCAAACACTTGCGACTCCACAAAGCCCCAAAGTCACTTGACTGTAGTGAATGTGGTAAAACATTCAAACTCCCAGGTGCATTGAGTATGCATATGAAAGTTCATTCTTGGCGGACTTATCACTGTGCAGAGTGTGGGGAGGGATTTAAGCATTGCGAGTATCTGGTAAAGCACTTGCGAGGCCACGATCGGGCGGCGCCATTGGACTGTAGCGAATGTGGCAAATCATTCAGAATTCCACGAGCTCTTCACATGCACATGAAAATACACTCCACATTCAGACCGTTCAGTTGTGCTGAGTGTGACCAAACTTTCAAAAGTTCAGAGTACCTGGCGAAACACATACGATCTCACGAGAAACCTGAATCGTTGGACTGTGTAGAATGTGGGAAGACTTTCAAAGTATCAGGTGCGTTGAGAATGCACATGAAGACTCACGTATGGAGACCTTACCACTGTGCTGAATGTGATCTGATGTTCATACATTCAGAATATCTTGCTAAGCATATTCGCAGTCATGAAAAACCTGAATCCTTAACCTGCGAGTTCTGTGAGAAGACATTTATGTCACCTGGTGCTCTCCGCATGCACAAAAAGACACATTCAGTTTGGCGACCACACCACTGTGCAGAGTGTGGAGAagtgtttaaaaatacatttaagctGCTCAAACACATACGAGTTCATGAGAAACCTGAATCGTTAGATTGTAACATATGTggaaaaacattcaaaaattcTGGCGGTCTGTGGATGCATGTCAAGAGTCATTCCTCACACGAGGCTTACCATTGTCGAAAGTGTGGTCAGTCGTTTAGGTATTCAGACCATCTGACGAAACACATGCGGATTCACAAAATACCAAAATCATTAGAATGCAAGGAATGTGGCAAGACTTTCAAACTTCCAGGTGCATACAGCATGCACGTGAAGTCTCATTCTTCAGGTCGTATTTATCACTGTGGAGAATGTGGAAAGGCTTTCAAAGACTCTTACTTTGTCGTAAAGCACATGAAGTTTCACGAAAATCATGAATCATTAGATTGTGCCGAATGTGGCAAGTCTTTCAAGTTTCCAGGGGCCTTGCGTCTTCACATGACTGTTCACTCACCTTGCCGTCCCTACAGTTGTGAAGAGTGTGGGAAAACGTTTAAACGCCCAGATCACCTGAGCCAACATCAGAAGAGAGTACATGCAAATCAACATTCACTAGAGTGTGGTGATTGCGGTAAAGCTTTTAAGCATGCAGGCGCTCTAGGAACTCATATGAGGGTGCATACAGATGAAAGACCATATCATTGTGTTGAATGTGGAACTTCTTTCAAAACTCAAGGCCACCTAAGTCAACACAAAAGAGTCCATATCTTACCCGAATACATCCAGACTGACATCAGCCACATCACCAGCCGTGTTCAGGTTCAGATCAAGTCGGAGCCACTCGAGGAAGAAACTATTCAACCCATGTCCTTTCATGAAGCACTTTCTCTAACGAGAAACATACGTCCCGCAGAACCATCGTTTGATTGTAACGAATGTAGTGCTACGTTCACAAGTTTTGGCCACCTTTCTGAACACAAGCAAGTTCACAGAAGATCCGAACCCATCACCAGTACACAACAGAGCGGAAATTCTAACTCAGGGGTGTATCTTGATAATTCTCCTATTTACATAAAGTCTGAGCCAATGACCTACCAGGAATACGATGATGTTTATGAAGAACCGAATGATAGGAGGGAAAGTCCAAGTGAACAGTCTTCTTGCCCAGCCTATGACTGCGGGGAATGTGGTAAACTGTTTGAACGATTGGAACACCTGGTTCAGCACATGCAAATTCATGCCGAACCTAGGGCTGGTCTTGTGTGTGGCGAATGTGACAAAGTGTTTAATTCCCACAAGGCGCTAGCTATTCACATGAACATTCACACTGGAAAGAGACCCTACGAATGTGGAGAGTGCGGGAAGACTTTCAAGCGCTCGGACCACCTTAATCAACACAGGCGTACCCACCAGGCTGTGCACCAGTACGAATGCCCCGATTGCGGAAAAATCTTCAAACACGAAGATTCGTTGACGAGACACGTCCAGATGCACAACGGACAGGCTCCCGTAGAATGTTACATTTGCGGACACAGTGTGAAGAATCTTAGAGCACTCACTTCTCACATGAGTTTACACGCAGAATACTCCACATTTGATTGCAACGTGTGCAGGGAAACGTTCAAGCATTTAGATCAATTAACCCGGCACATGCAGCTCCACAACATGGAGAAACCCTACGACTGTAAACAGTGTGGGGAGTATTTTATCCATCCCGACGCACTTCGTAAACACGAACAGCAGGCACACTCGGTGCAGGAGGCGATTTTGTGTCCGGAGTGTGGTAAAGGTTTCAAACATCTGGGAGCTCTCGGAACTCACATGAAATACCACACGTCCCAGAGGCCGTTTGGGTGCAACCAGTGTGGACAAACTTTCTTGCTGCCTCATCACCTCATTCAACACATGCGATCTCACGCGTTAATGCATGCTTAG
- Protein Sequence
- MQTYTHHKPFQCIECGACFRRPLPFKRHMRFHLRRQFSDSSDEAEMFSEVGFTSHMEVLEDFPPFVFDEAAKEQDTTTEGEQCVRTSAGNKSVNCLHCDRAFKHPSALVKHMRVHIKREPLNCLECGKSLKNSGALTMHMKVHSMETRYTCEECGEKFKYSESLLKHMRLHRQPQYLYCEECDRSFKLAGAYKMHMKSHTWKAYHCAECGMAFKHVDHLTKHIRVHVKPEPLECPECGKCFKFPSVLRLHMKVHCVSPPYYCAECDRIFKRPDYLNKHMQIHEKAQSTTCDECGKSFKNSGALSMHMKVHSLHHPYHCGECGQTFKYSIFLIKHLRLHKAPKSLDCSECGKTFKLPGALSMHMKVHSWRTYHCAECGEGFKHCEYLVKHLRGHDRAAPLDCSECGKSFRIPRALHMHMKIHSTFRPFSCAECDQTFKSSEYLAKHIRSHEKPESLDCVECGKTFKVSGALRMHMKTHVWRPYHCAECDLMFIHSEYLAKHIRSHEKPESLTCEFCEKTFMSPGALRMHKKTHSVWRPHHCAECGEVFKNTFKLLKHIRVHEKPESLDCNICGKTFKNSGGLWMHVKSHSSHEAYHCRKCGQSFRYSDHLTKHMRIHKIPKSLECKECGKTFKLPGAYSMHVKSHSSGRIYHCGECGKAFKDSYFVVKHMKFHENHESLDCAECGKSFKFPGALRLHMTVHSPCRPYSCEECGKTFKRPDHLSQHQKRVHANQHSLECGDCGKAFKHAGALGTHMRVHTDERPYHCVECGTSFKTQGHLSQHKRVHILPEYIQTDISHITSRVQVQIKSEPLEEETIQPMSFHEALSLTRNIRPAEPSFDCNECSATFTSFGHLSEHKQVHRRSEPITSTQQSGNSNSGVYLDNSPIYIKSEPMTYQEYDDVYEEPNDRRESPSEQSSCPAYDCGECGKLFERLEHLVQHMQIHAEPRAGLVCGECDKVFNSHKALAIHMNIHTGKRPYECGECGKTFKRSDHLNQHRRTHQAVHQYECPDCGKIFKHEDSLTRHVQMHNGQAPVECYICGHSVKNLRALTSHMSLHAEYSTFDCNVCRETFKHLDQLTRHMQLHNMEKPYDCKQCGEYFIHPDALRKHEQQAHSVQEAILCPECGKGFKHLGALGTHMKYHTSQRPFGCNQCGQTFLLPHHLIQHMRSHALMHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01565757;
- 90% Identity
- iTF_01565757;
- 80% Identity
- -