Eocu000376.1
Basic Information
- Insect
- Eucriotettix oculatus
- Gene Symbol
- -
- Assembly
- GCA_034510155.1
- Location
- CM067376.1:3475405-3476730[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.00033 0.37 12.2 0.8 17 41 8 29 5 31 0.88 2 14 0.02 22 6.5 2.7 17 40 36 56 29 59 0.85 3 14 0.0032 3.5 9.0 0.7 8 41 84 113 78 115 0.81 4 14 0.85 9.4e+02 1.2 1.3 18 38 121 138 116 143 0.80 5 14 0.77 8.5e+02 1.4 1.3 18 41 149 169 132 171 0.66 6 14 2.2 2.4e+03 -0.1 0.7 16 40 175 196 166 199 0.77 7 14 2.6 2.9e+03 -0.3 0.9 13 29 200 216 193 227 0.74 8 14 0.18 2e+02 3.4 0.6 15 41 230 253 217 255 0.77 9 14 0.12 1.3e+02 3.9 0.6 18 40 261 280 254 283 0.83 10 14 0.017 19 6.7 1.3 3 40 275 308 273 311 0.82 11 14 0.1 1.1e+02 4.2 1.6 2 41 302 337 301 339 0.84 12 14 0.023 25 6.3 3.2 13 40 340 364 333 367 0.80 13 14 0.00014 0.15 13.4 0.2 17 40 372 392 366 397 0.89 14 14 0.0069 7.6 7.9 0.6 17 40 400 420 393 428 0.86
Sequence Information
- Coding Sequence
- ATGTACACTGGTGGAGAATCTTACAAATGTGTaaagtgtgataaaacattctctaAATCATCAAACTTAACAGAGCACATGAGGAgtcatactggtgaaaaaccatgcAAATGTGTTCTGTGTGGTACAACATTTTCACAAACCTCAAGCTTAAAAAAACACATGATGACTCACACTGGTGGAAAACCTTACAAGTGCGTGGAGTGTGATACATCATTCTCACAACCCACAAGCTTAAAAgtacacatgagaattcacactggtgaaaaaccttacACATGTGCTGAGTGTGATCGAGCATTTTCACAATCCTCAAACTTAATAGagcacatgaggactcacactggtgataaaccatacaaatgtgttgagtgtgagaAATCATTCTCAAGATTCTCACATTTATCTAGGCACaagaggactcacactggtgtaaagccatataaatgtgttgaatgtggtAAAGACTTTGCAGAATCCTCAATATTAACAGtgcacatgaggactcacactggtgaaaaaccatacagatgtgttgagtgtgataaagcattcacacaatcttcaattttaacagAGCACAtaaggattcacactggtgagaaaccatacaaatgtgttgagtgtgataagaCATTCTCAAAAGCCTCATATTTAACAGCCCACCAGAaaactcacactggtgaaaaaccatatgaatgtgttgagtgtgatagaGCATTCAAACAATCCTCAACATTAACAGagcacatgaggactcacactggtgagaaaccatacatttgtattgagtgtgataaaacatttacacaATCCTCCAGCCTATTTAATCACATGAGGATGCACACCGgcgaaaaaccatacaaatgtgccgAGTGTGATAACACATTCTCACAAGcctcaaatttaacaaaacacaTGAGGATCCACAccggtgagaaaccatacaattgTGATAAATGTGATAGAGCGTTTTCATTATCCTCGGACTTAAGAAAGCACATAAGGACTCACACTGgcgaaaaaccatacaaatgtttaatgtgtgataaatcattctcaCAATCCTCAAGCCTTAAGAAACACATGAGGATgcatactggtgaaaaaccatacaaatgtgctgcgtgtgaaaaaatattctcacaGTCCTCTAACTTAATAgagcacatgaggattcatactggcgagaaaccgtacaaatgtgttgagtgtgataaaacattttcaagatACTCAAATATATCAAGGCACCTAAGGATTCACTCTGGTGGTAAACATAACAAATGTGTTGGTGTGATAAAGCATTCAGATTCTTTGAAGTGA
- Protein Sequence
- MYTGGESYKCVKCDKTFSKSSNLTEHMRSHTGEKPCKCVLCGTTFSQTSSLKKHMMTHTGGKPYKCVECDTSFSQPTSLKVHMRIHTGEKPYTCAECDRAFSQSSNLIEHMRTHTGDKPYKCVECEKSFSRFSHLSRHKRTHTGVKPYKCVECGKDFAESSILTVHMRTHTGEKPYRCVECDKAFTQSSILTEHIRIHTGEKPYKCVECDKTFSKASYLTAHQKTHTGEKPYECVECDRAFKQSSTLTEHMRTHTGEKPYICIECDKTFTQSSSLFNHMRMHTGEKPYKCAECDNTFSQASNLTKHMRIHTGEKPYNCDKCDRAFSLSSDLRKHIRTHTGEKPYKCLMCDKSFSQSSSLKKHMRMHTGEKPYKCAACEKIFSQSSNLIEHMRIHTGEKPYKCVECDKTFSRYSNISRHLRIHSGGKHNKCVGVIKHSDSLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00678665;
- 90% Identity
- iTF_00678665;
- 80% Identity
- iTF_00678665;