Eocu000107.1
Basic Information
- Insect
- Eucriotettix oculatus
- Gene Symbol
- -
- Assembly
- GCA_034510155.1
- Location
- CM067376.1:899498-900721[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.7 1.8e+03 0.3 0.5 14 40 30 53 25 55 0.76 2 12 0.017 19 6.6 3.3 3 40 48 81 46 84 0.89 3 12 0.43 4.8e+02 2.2 0.1 17 38 89 107 82 112 0.81 4 12 0.0028 3.2 9.2 1.0 14 40 114 137 102 140 0.80 5 12 0.027 30 6.0 0.6 17 39 145 164 137 167 0.82 6 12 0.002 2.2 9.7 0.5 5 40 162 193 158 196 0.85 7 12 0.0021 2.3 9.6 0.4 5 39 190 220 186 224 0.86 8 12 0.27 3e+02 2.8 0.7 18 40 231 250 228 253 0.88 9 12 0.2 2.2e+02 3.2 3.5 3 38 245 276 243 281 0.85 10 12 0.036 40 5.6 0.5 6 38 304 332 300 337 0.78 11 12 0.0091 10 7.5 0.2 16 40 341 362 333 366 0.84 12 12 0.0011 1.3 10.4 0.2 17 39 370 389 362 397 0.86
Sequence Information
- Coding Sequence
- ATGGTTGGAACGGTTAAATGTGTTCAGTATCATGAGGCAAGCGATGAATCAAGTACCGGAATTAATCCGGCGAAGATTCCGAGCGGAGAGAAGCGATACAGATGTGTCGAATGTGAtcagttattttcaaaatcggATCATTTAAAAAGGCACATGAGGATCCACACCGGCGAGAAGCCGTACAAGTGCGTAGTCTGTCGTCAATCGTTTTCCCATTCATCCACTTTAATaaaccacatgaggattcacaccggCGAGAAACCGTACCGATGTGATGCCTGTGACAAATCATTCTCAGCGTCATCCGATTTAAGAAAACACAGAAGAATTCACACAGGAGAAAAACCTTACGCATGTGCTgtgtgtaataaaacatttactcaATCGGCTAATTTGATAacccacatgaggattcacaccggtgaaaagccatacaagtGTGATGagtgtaataaaacattctcatcATCATCTGATTTGAGAAAACACGTCAAGATTCActctggtgaaaagccatacaaatgtgacGTTTGTGATAAAACATATTCGGCGTCGTCTGATTTACGGAAACACGTCAGGATACACACCGGCGAAGAGCCGTACAGATGTGTTGTCTGTCGTCAAACGTTTCCCCGCTCCTcgaatttaataaaccatatgAGTATTCATACCGGTGGTGTGAAACCATACCAATGTGGCGAAtgtgataaatcattttcaaaatcagaTCATTTAAAAAGGCACATGAGGATCCACACTGGcgagaagccatacaaatgtttaGTCTGCCATCAATCGTTTTCTCAGTTATCAACTTTAATAAACCACACgaggattcacactggcgaGAAACCATACCAATGTGCTGAATGCGATCAAGCATTCACACAATCGGGTCACCTAAATAAACACATGACGATCCACACCGGTGAAAACCCGTACGAATGCGACACGTGCGACAAGACATTCTCGGCATCGTCGGATTTGATAAAGCATAGAAGAGTTCACACCGGTGAGAAGCCTTACACGTGTGCCGTGTGTGACAAAGCATTTACACAATCGGCTAATTTGATAacccacatgaggattcacactggtgaaaaaccatacagaTGTGATGTGTGTGAGAAAACATTCTCAGTGTCATCTAACTTGAGCAAACACGTCAAGATTCACTCTGGAAAAAGCCACACAAGTCTGTCGCGCGCTATAAAGGATTTGTAA
- Protein Sequence
- MVGTVKCVQYHEASDESSTGINPAKIPSGEKRYRCVECDQLFSKSDHLKRHMRIHTGEKPYKCVVCRQSFSHSSTLINHMRIHTGEKPYRCDACDKSFSASSDLRKHRRIHTGEKPYACAVCNKTFTQSANLITHMRIHTGEKPYKCDECNKTFSSSSDLRKHVKIHSGEKPYKCDVCDKTYSASSDLRKHVRIHTGEEPYRCVVCRQTFPRSSNLINHMSIHTGGVKPYQCGECDKSFSKSDHLKRHMRIHTGEKPYKCLVCHQSFSQLSTLINHTRIHTGEKPYQCAECDQAFTQSGHLNKHMTIHTGENPYECDTCDKTFSASSDLIKHRRVHTGEKPYTCAVCDKAFTQSANLITHMRIHTGEKPYRCDVCEKTFSVSSNLSKHVKIHSGKSHTSLSRAIKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00678694;
- 90% Identity
- iTF_00678694;
- 80% Identity
- iTF_00678694;