Eocu001298.1
Basic Information
- Insect
- Eucriotettix oculatus
- Gene Symbol
- -
- Assembly
- GCA_034510155.1
- Location
- CM067376.1:18847482-18848681[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.011 13 7.2 1.1 15 38 6 30 3 34 0.80 2 14 0.0011 1.2 10.5 0.6 17 41 36 57 31 59 0.84 3 14 0.028 31 6.0 1.2 17 41 64 85 58 87 0.85 4 14 0.17 1.9e+02 3.5 0.5 17 40 92 112 86 115 0.82 5 14 1.3 1.5e+03 0.6 2.8 1 38 105 138 105 142 0.85 6 14 0.041 46 5.4 2.0 2 39 134 167 133 171 0.80 7 14 0.0019 2 9.8 0.7 17 40 176 196 165 199 0.83 8 14 0.00078 0.87 11.0 0.3 17 41 204 225 197 233 0.86 9 14 0.32 3.5e+02 2.6 0.2 18 40 233 252 229 254 0.84 10 14 0.0038 4.3 8.7 1.7 6 41 250 281 245 283 0.82 11 14 0.07 77 4.7 0.3 19 40 290 308 285 311 0.85 12 14 0.0081 9 7.7 0.6 17 41 316 337 309 339 0.87 13 14 0.0033 3.6 9.0 0.5 18 41 345 365 341 367 0.86 14 14 0.1 1.1e+02 4.2 0.2 17 40 372 392 365 395 0.81
Sequence Information
- Coding Sequence
- ATGTACTCTGCCGAGAAATTGTACAAATGTGTAGAATGTGAGAAAATGTTCTCACAATCCTCAAGTCTAACAACTCatatgaggactcacactggtgaaaagccatacaaatgtgttgagtgtgataaaacattctcacaatCATCAAACTTAACAACACACATGAGGACACACACTGGAGAgaagccatataaatgtgttgagtgtggtaAAGAATTCTCAGATTCCTCAACATTAAGATGTCACATGAATACTCACACTGGagagaagccatacaaatgtgctgAGTGTGGTAAAGATTTCTCAGAATCCTCAAAATATAAAaggcacatgaggattcatactggtgaaaaaccatacaaatgtgtagagtgtgagGTAACATTCACACACAATGCAAACTTGAAAAAACACACAAGGACACACAccggtgaaaagccatacaaatgtgttgagtgtggcAAAGTATTCTCAGATTCCTCTTCATTAAGATGTCATGTGAGGGCACACACTGGTgtgaagccatacaaatgtgttgagtgtggtaAAGATTTCTCAGATTCCTCAACATTAAGAAGGCACCtcaggattcacactggtgagaagccataccAATGTGTCAAGTGTGGTAAAGCATTCTCAGATTCCTCATCATTAAGAAgtcacatgaggactcacactggtgaaagaccacacaaatgtgttgagtgtgataaggTATTCTTGCAATCATCGAACTTAGCaacacacatgaggattcacactggtgagaagccatacaaatgtattGGATGTGTGAAAGAATTCTCAGATTCCTCATCACTAAGAAAtcacatgagaactcacactggtgaaaagccatacaattGTGTTGAGTGTAGCAAAACATTCTCAAATCCATCAACACTAAGAAGCCACATGAGGaatcacactggtgaaaagccattcaaatgtgttgagtgtggcAAAGAATTCTCAAATTTCTCAACATTAAGAACTCATATTAGGACTCATACTGGTGAaagaccatacaaatgtgttgtgtGTGATAAGTTATTTTCACAGTCATCAAATTTAACCAcgcacatgaggactcacactggtgagaaaccatttaaatgtgttgagtgtggcAAAGAATTCTCAGATTTATCAACATTAAGAGGTCACCTGAGTACTCACAATGGTGACAAGTCATAG
- Protein Sequence
- MYSAEKLYKCVECEKMFSQSSSLTTHMRTHTGEKPYKCVECDKTFSQSSNLTTHMRTHTGEKPYKCVECGKEFSDSSTLRCHMNTHTGEKPYKCAECGKDFSESSKYKRHMRIHTGEKPYKCVECEVTFTHNANLKKHTRTHTGEKPYKCVECGKVFSDSSSLRCHVRAHTGVKPYKCVECGKDFSDSSTLRRHLRIHTGEKPYQCVKCGKAFSDSSSLRSHMRTHTGERPHKCVECDKVFLQSSNLATHMRIHTGEKPYKCIGCVKEFSDSSSLRNHMRTHTGEKPYNCVECSKTFSNPSTLRSHMRNHTGEKPFKCVECGKEFSNFSTLRTHIRTHTGERPYKCVVCDKLFSQSSNLTTHMRTHTGEKPFKCVECGKEFSDLSTLRGHLSTHNGDKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00678673;
- 90% Identity
- iTF_00678673;
- 80% Identity
- iTF_00678673;