Basic Information

Gene Symbol
NCOR1
Assembly
GCA_034510155.1
Location
CM067377.1:102353403-102376086[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-14 7.3e-11 43.3 0.2 2 46 129 174 128 174 0.97

Sequence Information

Coding Sequence
ATGACCACCTGGGTGCCGCGGGCTCATCTCTCATTCATGTGCTTATTACATCGGAAGAACAAGGAGGATCAAGGATCACACGCAGCTCAGTATGGCTTGAGAGAGGAAGAAGTGGCATCTGGTGCTAGGGTCTGCAACTCGTGTCGTTGTAAGGCCGTGAGAAGTCGTTACACGCAGTGTCCTTTACCAACTTGCCCCAATGCCCGTGGTAGGGTGAAAAGACTTCGTCCGCTACCAGGGAGGTGGTCGGAATTGCCACCCGAAGTCCGCGCGCCAATAATTACAGAGTTCCAAATACCACCCACTGTAACAAAATGCTGCTCTGCCTGTTTCAACCGTATCTCTCGACGGTTATCACCTCAAGAAGAAGGTGACTGTGGTAATCAACGCTGGACTGAAGAAGAAACTGAAGGTTTGCGAAGAGGGCTACGTGAATTTGGTCTCAGTTGGAGTAAGGTGGCAGAGCAGGTGGGGCCCACTAGGAGCAGTCAGCAGTGTCggaatttctattttaattatcgaAAAAAGCTTGGCCTGGATTTACTCGTACAAGAGTACAATAAgAACCACTTGGGTGAGGAAAGAAAACCAACTGTCACAGATGAGGAGGAATCTGGATCGAGCACATCATCGTGTGAAGAATTTGTTGGCCCACCCATTAACAGTGACACTGACAGCGCAACTTCACCTACAGttgaAGAAAAGGTCGTAACGGCAGCTACTCCTTCAAATGATCAGCCTTCAAAAATCAAACCAAAGGGTCCTGTTACTACTACAGTAAATTCTGTCACACGAAGTGGAGAAGAAACTGGCACACAACCACCACCAGCCCCCTGCAAGGAGGACTATGATAGTTCAGCTACGGAAACTGCTGATGAAGGTCAAGGGGGAGCAGATGGCGAGTCAGGTGCTTCAACTTCAAGACAGTCTCCAGCAAAAGGCTATATACCACCACAACCTGCAGTTCCCACAGAAAATGGTCCTACAAATGGGCGAGAGAGCTCCTCACCGTCAAATTCTGTTAGATCTGTAAAAGATCTAATGCTTGGTGTTATAGAAATGCAACTAATGAGAAGCCACAGCGGCAGTGGATCAAATGCTTGTGCACCACCAGGAACTAGTGTAGCGCCAACAATATCTTCAATTTTAGGTGGCGTTGATAACCATAGACAGCCACAGCCTGATGTTACTTTTGTCAGAGAGTTTTCTAATAAACAGTTGGCTACTTTATCTGTAGTCAGCTCACATCAGCATTTGCCTCCACCTGCCCCTGCTTTATTGCAGCACACTCAAGCAACTGTTACACTGGTGGAATTACCCAAGGAAGGCTTGGTGGTTGGTCAGGTGCAGCAAGCAATGCGTGAAAATCGTTCAGAACCTGAAGGTGTAACATTGGATTTGAGTTTGAAGAAACATCGGGAATGTAGCCCTAGTCCATTGACACAATCAATATCACGAGGACCATCTCCTATTTCACCCTATAATTTACCACCACCACCAGCACATTCTGCTCATAACAAACATCAGTTACATCATTCATCAGGCCAATCCTACAGTCGAGCAGGTGAACAGTTCTATTCACATCCGGTTGTTGTCTCCACTGAATCCCGAAGTGTTACAAAGTCTCCCTCAGTTTATGTGTCCACTCCCAGACCTACTGCACCTACTGCTAAAATTCCAAAAGTGGCTACCTTGTCATCACCAAAGTTACCACCTGCTGCATCAACAAAAGGAGGATCTATAACACATGGAACACCTGTTTCAGCATCTGGCCAACAACAACGCTATGATAGTGGAGGTCTTTTACGTCAAATGACTCCACCTCAACAACCTCCACACAAAGAAGGAGGATCAATTACTCAGGGCACTCCAGTTTTACATCATCTATATCCACATGACAAACGTGCTGGTGCTgtgtatgaatattataaacgtTTATCACCAAGTGGTAATAGTAACACTGGTGCTGGTGCCTATGTACCACCTCCATATCAAGGTGGGCCTCCTTCTTCAGGATTTACTTATCCTCGACCAGCTTACCCTACAGAACAGCAAATGAGTTCACGTCAGATAATAATGAACGATTACATTACCTCTCAACAAATGCATGGACCTCCTAGAAGGTTGCCAGAAAAAGAGTATTATCAAGGAGGACAATACCCATCCAGCAGACCTCCATCAGCTGAACACCCAACAACTGGAACACCACCTCCTCCTCAAGCTCGTCAGGGTGTAATACAGCGTCATAATGCAACAAGACCTAAGCCACCTTCACCACAGCAGCAACCACGCTCATATCACCATCCTCATCATCCACATTATCCCCCTGGTCATGAAGCACTCTCATCGCTTGTTGATGTAGCTGTTCAACAGCCAAGTCTTCCAGTGCCTAAAGAGGAAAAGCCTGAAGGTTTAGGCAAAGCTGTTCTTGAACATGAGCACAGATACCGCTATGATCAACCGAGACATCAAAGAGAGATGCAGCAGTTACAGATGcaacagcagcaacagcaacaacTGCGTCAAAGAATTGAACAACGACACCATCAGATGACTGTTGCTTTTAGAgagcaacagcaacaacaattaGAAGCTACACGAATGTTGGTGGGTGGCTTTCCACGAGATGCTGGTGCAAGTCCAAATCCATTACCAGCAAATAGGCAACCTCCACAACAGTCTGTTCCAGAGTCAACTAGGGCAAGAACACCTTCTGGCAGAGTGACTGAGACTGCTGCCCCAACTCTCACAGCTGCGAGTCTTATTGATGCCATAATTACGCATCAAATCAATCAGAGCTCAACAGATAATGGACCAAGTTCAGGGTCTGCTGGACAAGGTCCTACAAGGCCTGGAGACAGACTATTCCAGGGCTTCCACCGTGAGCAAGCACCACCACCAACAGCACCTCCTCATGAATCAAATGGTAAAGCATCTCCTCTAAAACCTTCTGCTGCTCATAGTCCCATGCCAACACAAACTCAACAAGCTGTTCCTGAGCAGGGTGGAAAAGCCATTACATTGGCAGAACATATAGACTCTATAATAACAAAGGATTTTAGTCAGGCAGCTCAACAAAGGTTATTTCAACAAGATGTGATAGACTCTCAACAGCAACcacagcagcaacaacaacatagTTTAAAACTTCGGTATGCTTTACAACAACAAGAAGCAGCAGTTGCTCAAGTGCGGGATAAAGAGGAGCGTCAAGTTATCCGTGTTGCAGCACCCAAGTCACCTGAGTGTTGGAATCGTTATTATGCAGAGCAAAAACCATCCCACCTCTCTCCATTGGACTATGTTAAAAATCGTATTGTTGAAGTTATGCGAACGTCTGAGGATGAAAAAGGTCGTGACAGAGAAAGCCCTGGTGAAATGGTGATAGATGAAGGAAAAGCATCAACATCGTCTCCACCTCCATCTGTACCAAATGCTTCGTCATTTGTTCCACCTCCTACAACGACATATTATCCTTTCTCAGCACTTAATGTGATGTCTCCAAATCCTGGACAGCCTCCACCTTCAAATAAGCAGTCAACTCCTGGGTCTCCTGCCCCAGAAAGTGCACCTAGAACTGTAGAGCCAGCACCTCTACTTTCGGACCAGTATGAACCTCTTTCGGATGAGGATTAG
Protein Sequence
MTTWVPRAHLSFMCLLHRKNKEDQGSHAAQYGLREEEVASGARVCNSCRCKAVRSRYTQCPLPTCPNARGRVKRLRPLPGRWSELPPEVRAPIITEFQIPPTVTKCCSACFNRISRRLSPQEEGDCGNQRWTEEETEGLRRGLREFGLSWSKVAEQVGPTRSSQQCRNFYFNYRKKLGLDLLVQEYNKNHLGEERKPTVTDEEESGSSTSSCEEFVGPPINSDTDSATSPTVEEKVVTAATPSNDQPSKIKPKGPVTTTVNSVTRSGEETGTQPPPAPCKEDYDSSATETADEGQGGADGESGASTSRQSPAKGYIPPQPAVPTENGPTNGRESSSPSNSVRSVKDLMLGVIEMQLMRSHSGSGSNACAPPGTSVAPTISSILGGVDNHRQPQPDVTFVREFSNKQLATLSVVSSHQHLPPPAPALLQHTQATVTLVELPKEGLVVGQVQQAMRENRSEPEGVTLDLSLKKHRECSPSPLTQSISRGPSPISPYNLPPPPAHSAHNKHQLHHSSGQSYSRAGEQFYSHPVVVSTESRSVTKSPSVYVSTPRPTAPTAKIPKVATLSSPKLPPAASTKGGSITHGTPVSASGQQQRYDSGGLLRQMTPPQQPPHKEGGSITQGTPVLHHLYPHDKRAGAVYEYYKRLSPSGNSNTGAGAYVPPPYQGGPPSSGFTYPRPAYPTEQQMSSRQIIMNDYITSQQMHGPPRRLPEKEYYQGGQYPSSRPPSAEHPTTGTPPPPQARQGVIQRHNATRPKPPSPQQQPRSYHHPHHPHYPPGHEALSSLVDVAVQQPSLPVPKEEKPEGLGKAVLEHEHRYRYDQPRHQREMQQLQMQQQQQQQLRQRIEQRHHQMTVAFREQQQQQLEATRMLVGGFPRDAGASPNPLPANRQPPQQSVPESTRARTPSGRVTETAAPTLTAASLIDAIITHQINQSSTDNGPSSGSAGQGPTRPGDRLFQGFHREQAPPPTAPPHESNGKASPLKPSAAHSPMPTQTQQAVPEQGGKAITLAEHIDSIITKDFSQAAQQRLFQQDVIDSQQQPQQQQQHSLKLRYALQQQEAAVAQVRDKEERQVIRVAAPKSPECWNRYYAEQKPSHLSPLDYVKNRIVEVMRTSEDEKGRDRESPGEMVIDEGKASTSSPPPSVPNASSFVPPPTTTYYPFSALNVMSPNPGQPPPSNKQSTPGSPAPESAPRTVEPAPLLSDQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-