Basic Information

Gene Symbol
Cdc5l
Assembly
GCA_034510155.1
Location
CM067382.1:35618944-35629359[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-17 9.5e-14 52.5 1.8 2 46 9 54 8 54 0.97
2 2 3.1e-12 1.1e-08 36.3 0.1 1 45 60 103 60 104 0.93

Sequence Information

Coding Sequence
ATGCCGCGAATAATGATCAAAGGAGGAGTTTGGAGAAATACAGAGgATGAAATTCTCAAAGCAGCTGTGATGAAATATGGAAAGAACCAATGGTCCCGTATAGCATCTCTATTGCACCGGAAGTCAGCAAAGCAGTGTAAAGCTCGTTGGTATGAGTGGTTGGATCCCAGTATAAAAAAGACAGAATGGAGTAGAGAGGAAGATGAAAAATTGCTGCATCTGGCCAAACTGATGCCTACACAGTGGAGGACTATTGCTCCCATTATTGGGAGAACAGCTGCTCAGTGTCTTGAGAGATATGAATATCTATTGGATCAAGCACAGAAGAAAGAAGATGGGGAAGATGCAGCAGATGACCCACGAAAATTGAAACCCGGAGAGATAGATCCTAACCCAGAAACAAAACCTGCACGCCCTGACCCAAAGGATATGGATGAGGATGaaCTGGAAATGCTGTCAGAGGCCAGAGCACGTCTTGCAAACACCCAAGGAAAGAAGGCCAAGAGGAAAGCAAGAGAGAAACAGCTGGAAGAAGCTAGGAGACTTGCAGCATTGCAGAAACGGCGGGAGCTTCGGGCAGCTGGTATTGAGTTAGCAGccagaaagaagaagaagagaggtGTAGATTATAATGCTGAAATACCATTTGAAAAGAAACCAGCACCAGGGTTTTATGACACAACCAACGAGGAATTGGATCCTACAGGGCCTGACTTCTCACGTCTGCGGCAGCAACACTTGGATGGAGAATTGCGTACTGAAAGAGAGGAGagGGAAAGAAGAAAGGATAAGCAGAAACTTAAACAGCGTAAAGAAAACGACATACCTGTTGCAATGCTCCAAAACCAAGAACCAGCAAAGAAGCGAAGCAAATTAGTTCTCCCAGATCCTCAAATATCTGATCAggAATTACAACAAGTTGTAAAGTTGGGACGGGCCAGTGAAGCAGCTCGAGAGGTGGCCACAGAAAGCGGACAGCAACCATCAGATACTTTGTTAGCCGATTACTCCCTCACCCCAACTGGTGTCACAAGGACTCCACGAACTCCAGCACCCACTACTGACAGAATCCTGCAAGAGGCACAGAACATGATGGCTTTAACCCACGTTGACACTCCACTGAAGGGTGGTCTTAACACCCCTTTACACAATTCTGACTTCAGTGGAATTACACCCCAGAGGGTCACAATACAGACACCAAACACTGTGTTAGCAACCCCATTCCGGAGTCAGCGTTGTGATGtAAGAACTCCAGGATCATCTGTTGGGGGTTTCAATACGCCCAACTCTGAGGTTGCTCTTGTCAGCAGTTCCCGAAACAATCCTACACCTGTCCGTGATAAGCTCAGTATCAATCCTGAAGACAATTTGGATGTGGGTGACACTCCTCAAGCTTTCAACAGCTACCAGCGACAGTTAAAGGAGCAGCTACGACAAGGACTCAGTACACTGCCCACACCTCGAAATGATTATGAAATTGTTGTGCCTGAAGAGGAGGAAGCCGAGATTGTACCAGAAATGGGAATTACTGTTGAAGATCAGGCAGATGTAGATGCCAGATATGCAGCAGAATTGAAAGCCAAAAAGGAAGAAGAGCTCAAAAACAGATCTCAAGCAGTTCAGCGAGATCTGCCGAGACCTCAGGAAATAAATGCAAATGTACTGAGACCAACTCACACAGATCCTCCTCTCACAGAACTTCAGAggGCCGAGGAGCTGATCAAGAGTGAGATGTTGACAATGCTGCACTATGACTCTGTGTACTCACCAGTTCCAATTGTGGAGCCCAAGAGACGTGGGCAAGTAATGAGCCAGGCACAGCATTTGGCATATCTTGAACAGCATCCATACATAAACTATGGTCAGGATCAGATAACACAGGCTAGAGATATGTTGAAACAGGAGATGGAAGTGGTTAAGCAGGGTATGGGCCATGGAGAGCTATCACTTGAGTCTTACACACACGTGTGGGAGGAGTGTCTGGCACAGGTACTTTTCTTGCCTACACAAAACCGTTACACTAGACCAAACCTTGCCAGCAAAAAGGATCGTCTAGAGTCTCTGGAGAAGAGACtggaacagaataggggacaTATGACTCGAGAAGCTAAGAGGGCTGCTAAGAtggagaaaaaactgaaaatacttACTGGAGGTTATCAGTCTCGAGCCCAGGCACTGATCAAGCAGCTGCATGACCTGTATGAGCAGATGGAGCAGTTTCACCTTGAACTCTCCACTTTCAAGTTTCTCCAGCAGCAAGAAATGGCTGCAATCCCACGTAGACTTGAGTCCCTAACTGAGGATGTCAACAGGCAGACAGAGAGGGAGAAGATTTTGCAGAAGAAGTTTGGAGAATTGCAGGAACAGTTTGAGCAACTTCAACAGGCTTAA
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEDGEDAADDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIELAARKKKKRGVDYNAEIPFEKKPAPGFYDTTNEELDPTGPDFSRLRQQHLDGELRTEREERERRKDKQKLKQRKENDIPVAMLQNQEPAKKRSKLVLPDPQISDQELQQVVKLGRASEAAREVATESGQQPSDTLLADYSLTPTGVTRTPRTPAPTTDRILQEAQNMMALTHVDTPLKGGLNTPLHNSDFSGITPQRVTIQTPNTVLATPFRSQRCDVRTPGSSVGGFNTPNSEVALVSSSRNNPTPVRDKLSINPEDNLDVGDTPQAFNSYQRQLKEQLRQGLSTLPTPRNDYEIVVPEEEEAEIVPEMGITVEDQADVDARYAAELKAKKEEELKNRSQAVQRDLPRPQEINANVLRPTHTDPPLTELQRAEELIKSEMLTMLHYDSVYSPVPIVEPKRRGQVMSQAQHLAYLEQHPYINYGQDQITQARDMLKQEMEVVKQGMGHGELSLESYTHVWEECLAQVLFLPTQNRYTRPNLASKKDRLESLEKRLEQNRGHMTREAKRAAKMEKKLKILTGGYQSRAQALIKQLHDLYEQMEQFHLELSTFKFLQQQEMAAIPRRLESLTEDVNRQTEREKILQKKFGELQEQFEQLQQA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01566897;
90% Identity
iTF_01565541;
80% Identity
-