Eocu010390.2
Basic Information
- Insect
- Eucriotettix oculatus
- Gene Symbol
- bab1_1
- Assembly
- GCA_034510155.1
- Location
- CM067376.1:252030695-252047623[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-18 3.5e-14 53.5 0.0 1 43 28 71 28 73 0.94 2 2 7 4.5e+04 -5.3 2.0 6 12 205 211 202 215 0.51
Sequence Information
- Coding Sequence
- ATGTGGCAAAAATGTTGGAACACAAACCAGAGCTTGGTGCATAACCTTCGATTTCGAGAACGGGGCCCTTTAAAATCGTGGCGGCCAGAGACAATGGCAGAGGCTATTTTCTCAGTACTCCGTGAAGGACTTTCCTTATCGCAAGCTGCTCGGAAATATGATATTCCATATCCAACATTTGTTCTGTATGCAAATCGTGTACATAACATGCTGGGCCCTTCTATAGATGGAGGAGCTGATCTTCGTCCCAAAGGCAGAGGGAGGCCTCAACGTATTCTGCTAGGATCTTGGCCAGAGGAGCACATCAATGGAGTTATACGTGCTGTTGTATTTAGAGATCCTCAACACATTAAGGAGGAGCCTCATCTCAGCTATCCCCGTCTAACTCAACACACCCCGGCTAGACGGAGCCCATTACCAACCAACCTGGTATCCCGATATGTGTCATCACCTCTTGCAATGAGTGGCTTCGGTCAGCATATTAAGGATGATCCAGATATGACATACCCTCACATGGGAATGCAAGAACCCATGCAGAATTATGGAAATATGAATGCACCTCCTCCATGTACAAATGGCCCTGAACCTACTGTATCTCCTGGTGCTGCAGCAGCTGCTGCGGTGGCAGTTGTAGCTCAAGGTCTCAGACAACAGATGTGCAGTATGGTAGCAGCTGCCGCTCATCATCAACATACCGGTGCTAGTGCAGAAGCAGCCGGATTGGTGAGCAGCCTAGGATTGTGTTTACCACCACCTCCTGCTTCAAATGGCGGTGTTATTCGTGGAAGTCCCTTAGTTTCCGATTCACCAAGCCCCCCGCATGCCCCATCCCCACTCGCTAATAGCTTGGGGGTTGGAATCGGCTTACCTTCCAGCATGTCTTACAAACCACCTCCAAGCTTCACCTCTCCTCGACCTGAAACTTTGTTCCAAGAGGACATTGAAGAAATTGTCAAAAGTCCACAAGTCGGTGGTTCACCTGAAAATCTTATAAAGGAACCCAAAGAAACTTCTATATCTATAAAAATGGAATCTGTTGTTGAAGCACAGAATGAATAA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLREGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGADLRPKGRGRPQRILLGSWPEEHINGVIRAVVFRDPQHIKEEPHLSYPRLTQHTPARRSPLPTNLVSRYVSSPLAMSGFGQHIKDDPDMTYPHMGMQEPMQNYGNMNAPPPCTNGPEPTVSPGAAAAAAVAVVAQGLRQQMCSMVAAAAHHQHTGASAEAAGLVSSLGLCLPPPPASNGGVIRGSPLVSDSPSPPHAPSPLANSLGVGIGLPSSMSYKPPPSFTSPRPETLFQEDIEEIVKSPQVGGSPENLIKEPKETSISIKMESVVEAQNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -