Eocu010917.1
Basic Information
- Insect
- Eucriotettix oculatus
- Gene Symbol
- -
- Assembly
- GCA_034510155.1
- Location
- CM067376.1:263429436-263447924[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-16 1.6e-12 48.2 0.0 2 42 90 131 89 134 0.93 2 2 1.8e-09 1.2e-05 26.2 0.0 4 37 306 339 304 340 0.95
Sequence Information
- Coding Sequence
- ATGCAAACATACATGCATTGTGTCATACAGTGGTTGGCACCTGGATGCTACGATGTGTCTGTGCCATGCGAGTGCAATAACCTGTTCCTAATCCTTCCTCTTATTCTCCTGGCAGGACTGCAGTGGAATCTCCTAGAACATGGATTTCATCACCAAAATATAATGCCACCATCCTGTCTTTATGCTCCATCAAGTCCTTATTTAAACTCATGTCTTCCCAATCCTATGACTCCTGCAAGAAGGCGTCGAGGAACCAACCCACAAGCTGAAGAAAATTTCATTCGTGCATTGGATGCTGTCCGATTTGGTGGTTTGGGATTCTGCAAGGCTGCCCGTATATTTGGGGTGAACAACCGTACACTCTGGTTGGAATACCGCAAGCGTGGGTATCCTATTCTACGACCCAGCATCAGGGTACGGAAGCAGGAACCACCAGATTCCCAATTACAAGAGATGCAGCAGTTGCCTCCCACATCTCCTTTAGGTGTCTTAGAACAAGGAAATGAACTTACCATGCCACAAACATCAGTTTTAAGACATAGATTTTCTGATATGATGGGACAGCATCTGTACCCATGTCGGGACGGACGTATCCGCGGGGCTGGCGAAGCTGGAACGCGTGCAGTACGGTCCCTTCTGTCGAATGGCGGCGATCAACTCGGCTCCGGTTGTGTCCAGCCTCCACCACACGTAGAGCGATCCTGCTCTCCTTTACTGCTCGGCCGACCAAACGTCGTCAAGCACGGGCCATTGGGTGAATTCTCAAGCAGCGAACGAGCGCCACGTGACATCTGGGCGAGAATCCCAGATGTGTTTCAGGAGCAGGTATGGAGGGCCTACCCAAGCTCCCGTGCTAAGGTGGTGAACACTGGCCGGGGCCCTCGGTTGGTCGTGTGCAACAAAGAGGTACCTCCTAACATGCTGCAAGCTCTTCGTGCTGTCTTGCTAGGCCGATACTCCATCAACAGAGCAGCACTAGAATTCAGAGTCTCTCAGTCAACTCTGTGGCGTTATGTAGGAATGCTGCAGGATGCAGAATTCAGACAGTTCATCGCTCTcactacttaa
- Protein Sequence
- MQTYMHCVIQWLAPGCYDVSVPCECNNLFLILPLILLAGLQWNLLEHGFHHQNIMPPSCLYAPSSPYLNSCLPNPMTPARRRRGTNPQAEENFIRALDAVRFGGLGFCKAARIFGVNNRTLWLEYRKRGYPILRPSIRVRKQEPPDSQLQEMQQLPPTSPLGVLEQGNELTMPQTSVLRHRFSDMMGQHLYPCRDGRIRGAGEAGTRAVRSLLSNGGDQLGSGCVQPPPHVERSCSPLLLGRPNVVKHGPLGEFSSSERAPRDIWARIPDVFQEQVWRAYPSSRAKVVNTGRGPRLVVCNKEVPPNMLQALRAVLLGRYSINRAALEFRVSQSTLWRYVGMLQDAEFRQFIALTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -