Eocu003367.2
Basic Information
- Insect
- Eucriotettix oculatus
- Gene Symbol
- bab2
- Assembly
- GCA_034510155.1
- Location
- CM067376.1:71526901-71536132[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.8e-12 1.2e-08 35.9 0.0 1 39 434 473 434 477 0.90 2 4 9.9e-14 6.4e-10 39.9 0.1 1 39 488 526 488 529 0.95 3 4 1.1e-17 7.2e-14 52.5 0.0 1 45 543 588 543 588 0.97 4 4 2.6e-19 1.7e-15 57.7 0.1 1 43 595 638 595 639 0.96
Sequence Information
- Coding Sequence
- ATGGCTGGACAGCACTACTGTCTTCGTTGGAACAATTATCAGTCAAATATGACATCTGTATTTCATCAGTTACTTCGAAATGAAGCATTTGTTGATGTTACACTGGCTTGTAATGATTCATCTCTTAAGGCACATAAGGTAGTCCTGTCTGCTTGttcatcatattttcaaaaactctTAATGGAAAACCCTTGTAAACACCCAACGATCATTATGCCACAGGATGTGTgtttcagtgatttaaaatttattattgaatttgtttatcGAGGAGAAATTGACGTATCTCAAGCAGAGCTACAGAGCCTACTTAAAACTGCAGatcagttgaaaataaaaggTTTGTGTGATGTTCCTGATGGAAAAGATGGACCAGTTACCCCAATGCCTATTCTTTCACGGCGTTCTTTTACAAAACTGCGTCGACTGTCTGGAATTAAACGTCAAAGGCAACCAGAACCAATACGACGAACACTTTTCAAGGATTGTATTGAccagcaacagcaacaacaacatcagCAGCAAATATTACAACCTCCACcacctccacctcctcctcctccacaccaGTTACATATGCACCAACAGCATCATCACTTACAACCTAACCCAATGGCAATCCAGCATCAAATACATCATCAACAGCAACTTGAAATGGCTGAACTTGCAGCACAAAGAAATCCTATTGGCCCAGAATGTGTAACTGTTGCGACTTCAACTGAAGATGATCAGGAAAATATGCCTGTTGTTGTTTTAGAAAGCCGTATTCCTCAACAGCATCAGATGGTTCATAGCAATGGAGGAACACCAGTAATGACAACTCATGGCTTATCTCAATCACAGCAAATGGTTATGGATGGCACAAATCATAGTGGGAGTAGTAATACCACAGATGTCGAAATACCTCCTGAGGCACAACCTCCTGCTCCATCGGCAACTCTGGTGGAAAATATGGACATGCACGAATGCTCCGCCCATGATCGGGGTAGGGTCTTGTTTGCAGATAATTCTGGTGTTGGACGAGATGACCAGGAAAATGTGAAAGTGAAGTTTGAAACATTACGTGCAATGGAACAGGCCGACACTATTGACATTGACAGCCACATGTCAGAAAGGaatgtagGAGATGAAGACCATACTATGCATACGATGATGATAACACCAGAACTCCTAGGCTTGATACCTTCATCATCAGGACATTCagATCTCAGTGGGGATGCAGTGAAAGGAAGCCCAAAAAGTTGGAGTCAAGAAAGCCTGGACATAACGGATGTCAAACCAGGAGGTCCAAAGACATGGACTCAGGAAGACATGGAACTTGCTTTAGATGCTCTACGTAATCACAACATGAGTCTGACCAAAGCATCAGCTACATATGGTATCCCTTCCACTACTCTTTGGCAACGAGCACATCGCCTCGGAATTGATACACCTAAAAAGGAGGGTCCAAGTAAGAGCTGGACTGAAGATAGTCTTAACAGCGCTCTGGAAGCTCTGCGTACTGGCAGCATTTCAGCAAATAAGGCTAGCAAGGCATATGGGATTCCAAGCAGTACCTTGTACAAGATCGCTCGACGTGAAGGTATCAGACTTGCTGCTCCATTCAATGCAGCTCCCACAACTTGGAGTCCTGATGATCTTGAAAGAGCTCTAGAGAGTATCCGATCAGGTCAATCATCAGTGCAACGTGCTTCCACAGAATTTGGAATTCCGACTGGGACTTTATATGGTAGATGCAAACGTGAAGGTATTGAGTTATCTCGTAGCAATCCAACACCTTGGTCAGAGGATGCAATGGGTGAAGCATTGGAAGCAGTCCGCATCGGTCAAATGAGTATTAATCAAGCAGCAATACATTATAACCTACCTTACTCTTCCCTGTATGGCCGATTTAAGCGTGGGAAATATGAGGCCGAAGGACATCAGGAAGTTGGAGGATCTCCACCTCCTCCTCAAATTATGGTTGTACCATATCAGCCGCAACCTCCTCccccacctcctcctccacaccaACAGCAGCATATGCAACAACACCATTCTCCTCAACAACAGCAACCACACCCAATGTATCAGCAACACGCCAGCTGA
- Protein Sequence
- MAGQHYCLRWNNYQSNMTSVFHQLLRNEAFVDVTLACNDSSLKAHKVVLSACSSYFQKLLMENPCKHPTIIMPQDVCFSDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCDVPDGKDGPVTPMPILSRRSFTKLRRLSGIKRQRQPEPIRRTLFKDCIDQQQQQQHQQQILQPPPPPPPPPPHQLHMHQQHHHLQPNPMAIQHQIHHQQQLEMAELAAQRNPIGPECVTVATSTEDDQENMPVVVLESRIPQQHQMVHSNGGTPVMTTHGLSQSQQMVMDGTNHSGSSNTTDVEIPPEAQPPAPSATLVENMDMHECSAHDRGRVLFADNSGVGRDDQENVKVKFETLRAMEQADTIDIDSHMSERNVGDEDHTMHTMMITPELLGLIPSSSGHSDLSGDAVKGSPKSWSQESLDITDVKPGGPKTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKSWTEDSLNSALEALRTGSISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWSPDDLERALESIRSGQSSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYEAEGHQEVGGSPPPPQIMVVPYQPQPPPPPPPPHQQQHMQQHHSPQQQQPHPMYQQHAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00678578; iTF_01565530; iTF_01565709;
- 90% Identity
- iTF_00678578; iTF_01565530; iTF_01565709;
- 80% Identity
- iTF_00678578;