Basic Information

Gene Symbol
ct
Assembly
GCA_034510155.1
Location
CM067377.1:22551986-22578048[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5e-27 7.5e-23 81.6 0.0 3 72 413 483 411 488 0.95
2 3 4.9e-32 7.5e-28 97.7 0.0 2 77 874 950 873 952 0.96
3 3 1.1e-30 1.6e-26 93.4 0.0 3 75 1074 1147 1072 1151 0.95

Sequence Information

Coding Sequence
ATGGGCCGGCCACCGACTCCAATCGCGCAACTGCTGGAGGACGTGCAGAGGCTCCAGGCGAACCTGTCGAAGCTCCAGGAGACGTCGGCGGCGCAGGTGTCGCGCCTGGAAGAGCAGCTGGAACATCGACGCCAGCACATCGCTCGCCTGGAGGCGCGCCTGGACCAGCAACGCGACTACGAGGACCTCAAGCGCGAAGTCAGCATGCTCCGGGCCATGGACCTGCCTCTCTCTGCAGACAAGCCTCTGGAGCTGCTGATGCTGGAGAGGACCAAGGCCCTCCAGACGGCCGAGGTCAAGACTCCGGACGTCTCCTCAGGTGTAGCGACTTCTACGTCTACGACCGCCAACTCCACCGCCCCGCACATCCAGCAGCACCATCACCACCCCCATCTGCACCACCACCCGCATCTGTCCGAGCCGCTCCTCGAGCAGCCGCCGCCTCCACCGCCCCCTCCGCCGCCACCAGTCTCCTGCCAGCAGCAACCGCAGCCCCCTCCCTCCGCAGTTCCGTCCACGGCGCAAAGCGCGCCGCCTCCACCtcctcccccgccccctccGCCGCCGCCTCCAGCGTCGACGGCCGCCGCGGCTGCTGCGGCCGCCATGCTGTTCCCGCCCCCGCTGCAGAACGTCGAGACGTTCGGCTCCTTCCTGGGCGAGGAGATCGTGGCGAACTGGCGCCGCTCCCTCGAGCGGACCATCCTGAGCCAGGGGCACGCACCACCCCCGACGCACCTAACCACCGTTCGCTCCCCAGACGCGCCACCGCCCCCGGCATCTTCGCCCGCGCGCACCAGCCCGCCCGTCCCCTGCGTGGGAGCCGCCGCGTCGCCCAGCCTAGTCAACAGCAGCGGCTCGGCGCCCAGCGTCGCGTCACCCGTGGGCGGCGCCGCCCCGACCGACATACCCGGAAACCACCTCCAGCAGCAGCTGCTGAACGGCGGCAACCCGCCACCCAGGACGCCACCCGAAGATGGAGTGGCGATCCCGCCTCCACCGCCGCCCCCCGTGAGCACGCCCGGCGCCGCGGGGACGCCGCTCTATTTCCGCGGAAGCGGAGGCGGCGACGATAACATGAAGAGCCCCTTCCGCTTCGACGACCCGCGCAGCCCCTTTCGGTTCGGCGACGACGGCGCCGTGGGTCGGCTGGGAGAGTCGCTCATCCCCAAAGGTGACCCCATGGAGGCGCGGCTGCAGGAGATGCTGCGATACAACATGGACAAGTACGCCACGCAGAACCTGGACACGCTGCACATCTCGCGGCGGGTGCGGGAACTCCTCTCCGTCAACAACATCGGGCAGCGGCTGTTCGCCAAGTACGTGCTGGGTCTGTCCCAGGGAACAGTGTCCGAGCTCCTCAGCAAGCCCAAGCCCTGGGACAAGCTCACCGAGAAGGGACGCGACTCCTACCGCAAGATGCACGCCTGGGCCTGCGACGACAACGCCGTGCTGCTGCTCAAGTCGCTCATCCCCAAGAAAGGTCTGGGGCGCAGTGCCATAGAGGCCAGAAAGACTCCGACAGGAGCCCTGCACTCTCCGCCAAGCAGGGGCAGTCCAGGCCCTCAACCTCACGAGCTGCACCATGGCCACCACGACTGGTTTTTCCaccaccaccagcagcagcagcagcaggtcCATGGCATACCGCCACACCTCATAGGTAAAGACACTGGAATTCCACCATTTGGTAGGGGGGACCCAGACAACATGACCGAGGAGCGAATAGCACACATCTTGAGTGAAGCAAGCCAAATGATGAAGGGACAAGTTGAAGACAGCCATAGCAATGACAGCAAATCTCCAAACCATGCACAGTGCCCATCTCCCCTGGGAGGGAAGGACAGCTCACTAAATCGTCGTCTCAAGAAGTATGAAAATGATGACATTCCACAGGAGAAGGTGGTTCGCATCTACCAGGAAGAACTTGCTAAGCTGATGGGGAGGAGAATGGATGACAGACCTCGGGACCACTTCCCTAGCTTGCTGTTCCCACACTTCTTTCCTGGAGGGGGCGGAGGAAGCGGGCCAATGGACCGGACTCAGGAGGAGATTCGCATGGCATTGGATGCATACCACCGTGAGTTGGCAAAACTGAACTCGGCATGCCCCAGCACGGCAGGATTGTTAGCATTGCAACAGCAGGCAGCATTgactcaacaacaacaacagcaacaacaacagcagGTTGCCCAGATGAACGGTGTCGCTCAGGACCTGTCCCTCCCCAAACAAGAACCGCGCAAGGACAAGTTAGCCAATGGGGAACTGCCAGACCCCGATAAGAAGGAGGTGCTAGAGTCCGTTGCCGACGTGCTGCGGCACGCGGGCAGTGCGTTCTCGCTCGTTCGGCCCAAGCTGGAGCCAGgaatggGGCAGCCTAGCCAGCCTTCAACTGGGAGCAGCACTGCAGGCAGTCCTTTGAGCAATTCAATTCTTCCTCCAGCCATGACACCCGCAGACGAATTTGTCGGATCAGCTGCAGCCAGTCCATTACAACGAATGGCCTCCATCACCAATTCCCTCATCTCACAACCTAGCACACCTTCTCACCACTCCCCATCACAACGGCCCCTGAAAGCTGTGCTGCCTCCAATCACACAACAGCAGTTTGATATGTATAACAACCTCAATACTGAGGAGATTGTTAAGAAGGTGAAAGAATCTCTCAGCCAGTATTCCATCAGTCAGAGACTATTTGGAGAGTCTGTCTTAGGACTTTCCCAAGGCAGTGTCTCTGATCTCCTGGCGAGGCCAAAACCTTGGCACATGCTAACACAAAAAGGCCGGGAGCCTTTTATCCGTATGAAGATGTTCTTGGAAGACGACAATGCAGTCCACAAACTGGTTGCAAGCCAATACAAGATTGCTCCTGAGAAATTGATGCGCACCGGTAGCTACGCCGGCGGGCCTCGTAAGTCTCcatgcACATCGCTTACTAAGCCTCAACCTACTCAACCAAAGATGCTCCCAACGGAGCCACCAAAGGGTCACGAACTTGGCCCTTCAATGCAGATGCATCCTCAGCCACCACCTACATCTGTACCTcaaccacccccaccacccTTACTGGTGACACCACCAGGACACATGGCTGGGCTCACAGCATCCGACATGAAGAAAAGCCACATGCATCCTTCGCACCATGCACAGCCCAACGCTCTTAGGGCGCTGCAACAGCATATGGCACCCTCTGTTTATGAAATGGCAGCCTTGACTCAGGATCTGGACACTCAAACCATAACGACCAAAATCAAGGAGGCCCTCCTGGCCAACAACATTGGTCAAAAGATTTTTGGAGAAGCAGTCTTGGGACTTTCTCAAGGATCGGTCAGTGAACTACTATCGAAACCTAAGCCGTGGCACATGCTGAGCATCAAGGGTAGGGAACCGTTCATCCGGATGCAGCTGTGGCTGAGCGACGCTCACAACATCGACAGGTTGCAGGCTCTGAAGAATGAGCGACGGGAAGCAAACAAGCGACGTCGTAGCAGCGGTCCCGGCGGCCATCACATGGGTGGCGGAGGAGGAGGCGGCGCGGACAACAGCAGTGACACCTCTTCCAACGACACCTCGGAGTTCTACCATAGTCCCAGCCCAGGACCCGGACCCCCATCAGCTAAGAAACAGCGAGTTCTGTTCTCAGAGGAGCAAAAGGAGGCCCTCAGACTAGCGTTCGCACTGGATAGCTACCCGAACATGGCCACCATCGAGTTCCTGGGAGCCGAGCTGGCGCTGTCCAGCCGGACCATCACCAATTGGTTCCACAATCACAGGATGCGGCTGAAGCAGCAAGTTCCCCACGGCGTGTCGCCCGAAAGTGCCCAGCAGGGTAACAGGGAAGCGTCAGGGGGACAGCAGACTTTCGACCCTGTTCAGTTCAGGCTTCTACTGAACCAGCGGTTACTCGAACTGCAGAAGGAGAGGCTGGGTCTGGGCTCCGTCCCCTTACCCTACCCACCTTACTTCACCGCCAACAACAACCACCTCGCTGCCCTCATGAGCCGGGGCCTCCTACCTTCCGCGGACTGTGACATCGCCGGTTCGCTAAGCAACGCCATCAAGGAACAGCTCAGCGGACTTGACCTGAGCATGGGAGGCCTCAAGAGGGAGCCGGACTTCGAAGACGAGGAGGACGTGGAGAGCAACCTCGGCAGCGAAGATTCGAACCTCTCCAGCGGTAGCCTGAGGGAGGCTGCCGTGAAGAAGGAGTCAGCGGCTATCTTGACACCGGTGCGGACGTCACGGCGAAAACCTGCGGCGCCGCAATGGGTCAACCCGGAATGGCAGGAGGTGACGGGTCCCACTGAGGAGGGTAAAGACAAGCGGGGAGACCAGGAAGTCATAATCAACGGCGTTTGTGTCATGCAGACGGACGACTACGGCATGAAGCTGAGCAAGGATGAAGAGACTGTCCGGGTCGAGCCCACGCCGGTCCTCGACCGTTacgaggacgacgacgacgaccagTGCAGCGAAGCGTCTTCCGATGGCGACGCGGGGAACACCGACGTCGTCCCGACGGACTGCCTCCGTCCCAGAGGAGCCTCGGTGGAAGGGGAATTGAACGACGAGCCGGAGAGGAGGAGCGCAAAATCCGAGCCCCGTTCACCTCAGCATCACGTGGGCGACGATGGCGACGCGTTGGCCGAACCTAGACTCGTGAAGCAGGAGGAGGAGAGCCGAGACTCCAACGAAGACGAAAGAGTGAAAGACTGGGATTCTGGTAACTGTGATCGCGAACATAGTTCTGATGTGCTCGAAAAAATTCAGAAGAGAATAAAAACCGAAGAACAAGACGGGCGatgggaatattaa
Protein Sequence
MGRPPTPIAQLLEDVQRLQANLSKLQETSAAQVSRLEEQLEHRRQHIARLEARLDQQRDYEDLKREVSMLRAMDLPLSADKPLELLMLERTKALQTAEVKTPDVSSGVATSTSTTANSTAPHIQQHHHHPHLHHHPHLSEPLLEQPPPPPPPPPPPVSCQQQPQPPPSAVPSTAQSAPPPPPPPPPPPPPPASTAAAAAAAAMLFPPPLQNVETFGSFLGEEIVANWRRSLERTILSQGHAPPPTHLTTVRSPDAPPPPASSPARTSPPVPCVGAAASPSLVNSSGSAPSVASPVGGAAPTDIPGNHLQQQLLNGGNPPPRTPPEDGVAIPPPPPPPVSTPGAAGTPLYFRGSGGGDDNMKSPFRFDDPRSPFRFGDDGAVGRLGESLIPKGDPMEARLQEMLRYNMDKYATQNLDTLHISRRVRELLSVNNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVLLLKSLIPKKGLGRSAIEARKTPTGALHSPPSRGSPGPQPHELHHGHHDWFFHHHQQQQQQVHGIPPHLIGKDTGIPPFGRGDPDNMTEERIAHILSEASQMMKGQVEDSHSNDSKSPNHAQCPSPLGGKDSSLNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRMDDRPRDHFPSLLFPHFFPGGGGGSGPMDRTQEEIRMALDAYHRELAKLNSACPSTAGLLALQQQAALTQQQQQQQQQQVAQMNGVAQDLSLPKQEPRKDKLANGELPDPDKKEVLESVADVLRHAGSAFSLVRPKLEPGMGQPSQPSTGSSTAGSPLSNSILPPAMTPADEFVGSAAASPLQRMASITNSLISQPSTPSHHSPSQRPLKAVLPPITQQQFDMYNNLNTEEIVKKVKESLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYAGGPRKSPCTSLTKPQPTQPKMLPTEPPKGHELGPSMQMHPQPPPTSVPQPPPPPLLVTPPGHMAGLTASDMKKSHMHPSHHAQPNALRALQQHMAPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGGHHMGGGGGGGADNSSDTSSNDTSEFYHSPSPGPGPPSAKKQRVLFSEEQKEALRLAFALDSYPNMATIEFLGAELALSSRTITNWFHNHRMRLKQQVPHGVSPESAQQGNREASGGQQTFDPVQFRLLLNQRLLELQKERLGLGSVPLPYPPYFTANNNHLAALMSRGLLPSADCDIAGSLSNAIKEQLSGLDLSMGGLKREPDFEDEEDVESNLGSEDSNLSSGSLREAAVKKESAAILTPVRTSRRKPAAPQWVNPEWQEVTGPTEEGKDKRGDQEVIINGVCVMQTDDYGMKLSKDEETVRVEPTPVLDRYEDDDDDQCSEASSDGDAGNTDVVPTDCLRPRGASVEGELNDEPERRSAKSEPRSPQHHVGDDGDALAEPRLVKQEEESRDSNEDERVKDWDSGNCDREHSSDVLEKIQKRIKTEEQDGRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00678391;
90% Identity
iTF_00678391;
80% Identity
iTF_00678391;