Emi028191.1
Basic Information
- Insect
- Euclidia mi
- Gene Symbol
- -
- Assembly
- GCA_944738845.2
- Location
- CALYKX020000247.1:647866-670874[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.0087 2.4 10.9 1.9 1 23 306 328 306 328 0.97 2 18 1.9 5.2e+02 3.6 2.1 1 23 335 357 335 357 0.86 3 18 0.00024 0.067 15.8 0.4 2 23 364 385 363 385 0.96 4 18 8.2e-05 0.023 17.3 3.5 1 23 391 413 391 413 0.98 5 18 0.00054 0.15 14.7 2.1 1 23 419 441 419 441 0.96 6 18 0.05 14 8.5 0.1 1 16 447 462 447 464 0.89 7 18 0.05 14 8.5 0.1 1 16 494 509 494 511 0.89 8 18 0.05 14 8.5 0.1 1 16 541 556 541 558 0.89 9 18 0.05 14 8.5 0.1 1 16 588 603 588 605 0.89 10 18 0.05 14 8.5 0.1 1 16 635 650 635 652 0.89 11 18 0.05 14 8.5 0.1 1 16 754 769 754 771 0.89 12 18 0.05 14 8.5 0.1 1 16 897 912 897 914 0.89 13 18 0.05 14 8.5 0.1 1 16 944 959 944 961 0.89 14 18 0.05 14 8.5 0.1 1 16 991 1006 991 1008 0.89 15 18 0.05 14 8.5 0.1 1 16 1038 1053 1038 1055 0.89 16 18 0.05 14 8.5 0.1 1 16 1181 1196 1181 1198 0.89 17 18 0.05 14 8.5 0.1 1 16 1324 1339 1324 1341 0.89 18 18 0.00016 0.045 16.4 1.0 1 23 1555 1578 1555 1578 0.97
Sequence Information
- Coding Sequence
- ATGGCCGAAACGAGTACAATGAACTCCGATAACAAAGTGGAGCAATCCGAGGAGAAGCAGGACATGGAGGTGATCAAGACGGAGGTGGAGCTGATGGTGAAGCGCGAGCCGCTGGAGTGCGTGGTGTGCGTGACGCGCAGCCACGAGTGCTTCGACATGTACCTGACCAACACCGCGGCGTCCGGCGCGACGTTGCACCACTTCCTCACCAAGTTCACTCAGCTCGACTTCGCCGCCTCACAAAACTGCTCCAAGTTCGTATGTAAGACTTGTTATGAACTCATCAATGTGCTGGAGCAGGCAGAGTTGGAATATACGAAACTGAAGGAAACATTTGAAGCAATACTGAGCAAAAACCCACTATTCGAGACACCTATGGTGCAACCAATAAGACTGAACGCAGTGAAGGCAGAGGTAGAAATAGAGAATGATGACTATGTGTGCGACACAGCTAATCATGATGACTCAGATGATGAACCTCTTGCTGCTCAAAGTAAAAAGAAGCGACATAAAGTGGAAAAGAAAAAGAAAAAAGTGACCACAACAGCTAAACGTAAAACAAGAACTAAAAATAATGAAAGTTGGAAGTGTGATGAGTGCAATGAGAAAGGTACGGTGGGAGGTGCGGTGGGTCTGGCCGCTCACAAACTTGCTGTACACACGCTAGAGGATGCTAATGCAATGCTCCAAGATGTCAAAACTGAGGACTCAGCGGAAGGTTCGCAAAGTCCTCTGTTTAACAATGGTTTTGAAAATGGTCTGAAAATAGAGATAGAAGCGCAATTCGATGACGACGATAGTCTTCCAGATGCCACGGACGACTTCCTTGAAGACTCTAAAAGCAGTAAAAAGCTTATGTTACGTAGAAACAAGACTAAATCTATACCGCCTAGAAAGAAAAAAGTTAAAGTCATGCACCAGTGTGACCAGTGTGATGCTAAATATTCTTCTAATGCGCGACTGGAGCAACACAAGCTGAAGCACGACGGCTCGAAGCCGCCCTACATCTGCGAAGTGTGTGGCGCGCATTACAAGCACAAGCGCGCCTGTGACATACACATCGCGCTTCACAAAGGTATAAGCGATTGGAAATGTGAAGAGTGCAATAAATTGTTCCCGTCGAAGAACGCGTTACAGAGGCACAACAACATCCACACGGGCAAGCTGAACTACCAGTGCGACCTGTGCGGGAAGTCGTTCATCCACACGTCGTCCTTCAAGATGCACAAGCTGTCGCACTCGGGAGTCAAACCGCACGCCTGCGACGTGTGCGGGCTCGCGCTCATGACCCGCTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGGGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACTACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACTACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACTACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACTACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACACTACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACACTACCCACATTACACACTACTCTCACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACACTACCCACATTACACACTACTGACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACACTACCCACATTACACACTACTGACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACACTACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACTACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACTACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACTACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACACTACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACACTACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACACTACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACACTACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACACTACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACACTACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACACTACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACACTACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCAAGCGACACAAGCGCGTGCACTCCGGCGAGAAGCGACACGAGTGCGCCGTCTGCGGCAAGCGCTTCTCCGAGAGGTACGCACTACACACAATACCCACATTACACACTACTCACACTACATACACTACTCACACTCGCACCTCTTGAGGTGCGAGTGCAAGATAGTACGTAAGAGAGGAACGCACTACTCACACTTGCACCTCAAGAGAGGTACTCACTACTCACACTCACATCTCAAGAGAGGTACGCACTACTCACACTCGCACCTCAAGAGAGGTACGCACTACTCACTACTCACACTCACATCTCAAGAGAGGTACGCACTACCCACACTCGCACCTCAAGAGAGGTACAACCTAGCGGCACACAGCAAGTCTCACGAGGCGGGAGACGTGGCGCCGCGCGACGCCGCCGTCGCCGCCGCCGCGCCACGACGCAGACTGTTCCGATGTACCTTCTGTGTCGAGCGGTTCGAGAGACGCTACATGCTGGAGCGGCACATGTCGGTGGTGCACGGGCGCACGCTCGAGCGCCCACCCCCCACCCCGCGCAACACCATGAGCAAGCTTCTTAAGGCGCAGGCGCAGCGCCGCGACCACCCGCCACCGCCGCCGCCAGACGCCGACACAAAGGACGAACTCAGCTCAGACTCCCGGACGCCTTCCACACCTATCACACCGCAAAAACTCATCGCGCAGCTAGCGTCGTCGACGTCGGTGATAGCGCAGGGCGCCTGGAGTGGCACCTACGAGTTCGGCGCCGCGCTCAGACACGACTACCCGCACTGA
- Protein Sequence
- MAETSTMNSDNKVEQSEEKQDMEVIKTEVELMVKREPLECVVCVTRSHECFDMYLTNTAASGATLHHFLTKFTQLDFAASQNCSKFVCKTCYELINVLEQAELEYTKLKETFEAILSKNPLFETPMVQPIRLNAVKAEVEIENDDYVCDTANHDDSDDEPLAAQSKKKRHKVEKKKKKVTTTAKRKTRTKNNESWKCDECNEKGTVGGAVGLAAHKLAVHTLEDANAMLQDVKTEDSAEGSQSPLFNNGFENGLKIEIEAQFDDDDSLPDATDDFLEDSKSSKKLMLRRNKTKSIPPRKKKVKVMHQCDQCDAKYSSNARLEQHKLKHDGSKPPYICEVCGAHYKHKRACDIHIALHKGISDWKCEECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHACDVCGLALMTRSHLKRHKRVHSGEKRHECAVCGKRFSERYALHTTHITHYSHYIHYSHSHLKRHKRVHSGEKRHECAVCGKRFSERYALHTTHITHYSHYIHYSHSHLKRHKRVHSGEKRHECAVCGKRFSERYALHTTHITHYSHYIHYSHSHLKRHKRVHSGEKRHECAVCGKRFSERYALHTTHITHYSHYIHYSHSHLKRHKRVHSGEKRHECAVCGKRFSERYALHTLPTLHTTHTTYTTHTRTSSDTSACTPARSDTSAPSAASASPRGTHYTHYPHYTLLSLHTLLTLAPQATQARALRREATRVRRLRQALLRERHKRVHSGEKRHECAVCGKRFSERYALHTLPTLHTTDTTYTTHTRTSSDTSACTPARSDTSAPSAASASPRGTHYTHYPHYTLLTLHTLLTLAPQATQARALRREATRVRRLRQALLREVRTTHTTHITHYSHYIHYSHSHLKRHKRVHSGEKRHECAVCGKRFSERYALHTTHITHYSHYIHYSHSHLKRHKRVHSGEKRHECAVCGKRFSERYALHTTHITHYSHYIHYSHSHLKRHKRVHSGEKRHECAVCGKRFSERYALHTTHITHYSHYIHYSHSHLKRHKRVHSGEKRHECAVCGKRFSERYALHTLPTLHTTHTTYTTHTRTSSDTSACTPARSDTSAPSAASASPRGTHYTHYPHYTLLTLHTLLTLAPQATQARALRREATRVRRLRQALLREVRTTHTTHITHYSHYIHYSHSHLKRHKRVHSGEKRHECAVCGKRFSERYALHTLPTLHTTHTTYTTHTRTSSDTSACTPARSDTSAPSAASASPRGTHYTHYPHYTLLTLHTLLTLAPQATQARALRREATRVRRLRQALLREVRTTHTTHITHYSHYIHYSHSHLKRHKRVHSGEKRHECAVCGKRFSERYALHTLPTLHTTHTTYTTHTRTSSDTSACTPARSDTSAPSAASASPRGTHYTHYPHYTLLTLHTLLTLAPQATQARALRREATRVRRLRQALLREVRTTHNTHITHYSHYIHYSHSHLLRCECKIVRKRGTHYSHLHLKRGTHYSHSHLKRGTHYSHSHLKRGTHYSLLTLTSQERYALPTLAPQERYNLAAHSKSHEAGDVAPRDAAVAAAAPRRRLFRCTFCVERFERRYMLERHMSVVHGRTLERPPPTPRNTMSKLLKAQAQRRDHPPPPPPDADTKDELSSDSRTPSTPITPQKLIAQLASSTSVIAQGAWSGTYEFGAALRHDYPH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -