Basic Information

Insect: Euclidia mi
Gene Symbol: -
Assembly: GCA_944738845.2
Location: CALYKX020000196.1:4085543-4093131[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.001 0.29 13.8 3.6 1 23 243 266 243 266 0.94

2 10 0.027 7.5 9.4 0.2 2 23 292 314 291 314 0.96

3 10 0.018 5 9.9 1.3 1 23 336 358 336 358 0.97

4 10 0.073 20 8.0 2.0 1 23 362 384 362 384 0.88

5 10 0.0027 0.75 12.5 0.4 1 23 388 411 388 411 0.93

6 10 0.88 2.4e+02 4.6 7.7 2 23 418 440 417 440 0.96

7 10 0.00019 0.053 16.1 0.2 1 23 447 470 447 470 0.95

8 10 0.00086 0.24 14.1 4.9 1 23 476 498 476 498 0.97

9 10 1.7e-06 0.00048 22.6 2.9 1 23 504 526 504 526 0.98

10 10 0.0001 0.028 17.0 1.2 1 23 532 554 532 555 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.001	0.29	13.8	3.6	1	23	243	266	243	266	0.94
2	10	0.027	7.5	9.4	0.2	2	23	292	314	291	314	0.96
3	10	0.018	5	9.9	1.3	1	23	336	358	336	358	0.97
4	10	0.073	20	8.0	2.0	1	23	362	384	362	384	0.88
5	10	0.0027	0.75	12.5	0.4	1	23	388	411	388	411	0.93
6	10	0.88	2.4e+02	4.6	7.7	2	23	418	440	417	440	0.96
7	10	0.00019	0.053	16.1	0.2	1	23	447	470	447	470	0.95
8	10	0.00086	0.24	14.1	4.9	1	23	476	498	476	498	0.97
9	10	1.7e-06	0.00048	22.6	2.9	1	23	504	526	504	526	0.98
10	10	0.0001	0.028	17.0	1.2	1	23	532	554	532	555	0.95

Sequence Information

Coding Sequence: ATGGAGTTCGATGAAATAGTGGTGAAAGAAAGCCCCGGGCTTTGCCGGTGCTGTCTCTCGGAAGGATGTTACAAGGACTTAGGGTCGGAGTATACTTGGATGAATGAAACCGAAGTGTATGCCGATATGCTATTAGAGTGTTTTGATATTAGCATCACTCAACACAATGAAGGTCCAAATGGACCAAATCGTCTCATCTGTGAAGTGTGCATTACCCGACTACGAGATGCCTGCAATTTTAAGAAGCAAGTGTTGGATTCTGAGAAGAAGTTCATTGATATGATGGGTCGTGGAGAATTCAGGCCTAAGATGCTCATCTATCAGACTCAAATGAAATGTGAAGAAGCGCCTGCTGAGGCCCCCATTGAAGAAGCTGAAGTGGAGTATTTGGATGATGACATGGATTTTGTTGATGACACAGGCGAAGCATTAAAAGATGAGACAGAGCCTACAGTGTCTGACATTACAGTCAGTTCGCTCCCCGTCAAGGGCAAACGTGGCCGTCCCAGGAAGAACCTGGTCAAACCTGAGAAGAAGGCGAAGGTGGCCAAGTTAGAGGACAAGCCCAAGAGCTCCAAGGCTGTTGCTAAAGGTGTGAAACTGCGCGCGGAGGCGTCGAGTAAGTCCTCCATGACGTCAACAAAACGCAACAAACTCATGAAGAGAAACGCTATTATCGTTCTAGAAAACTCCAACGCGCTCCCATTCAAGTGGCACAGACAAAACTATTTATGTTTCTATTGCCATCTCACTTTCAAAGACACTAGCTTGCTCAAAGAACACACAAAAAATGAGCATAGGAAACCCAATATAAAAGCTGCCGTATCTTATTTACGGAGAGACGAAAAAGTAAAAATAGACGTGTCTTGTTTACAATGTCGTATCTGCGACAGTAATTTAGACAGTTTGAACAACCTTACAGAACATTTAAAGGTATCACATAGCAAAATTTTTGATGAGGAGTACGGTTATGGTTTAATACCCTACTATTTGCAGAATGACGTATTCCATTGCGCTATCTGCGAAGAAGAGTTCCAGTATTTCATAAAGTTAAATCAACATATGAACGAACATTTTGGCAATTACATCTGTGAGTTGTGCGGCAAATCGTTTCTTAGTCAGGATCGTCTTAGATGTCATTCATTGACACACGGCTCCGGGTTCCGTTGTAACGAATGTCCGGAAACTTTTGACTCATTGACCCAAAAGAATAATCACGAAGCCAAAGTTCACAATAAGGACAAGCTTCTAAAATGCTTCTTTTGCACGCAAACCTTTGCAAACTACAACCAGAGGAAAAGGCACCATCATACGATGCATGATGTGAAAATACCTGAATACAACTGTCCTGTCTGCGGTAAAACATTTGAGATTATGAGTAAAATGAAAGTTCATTTGAAGGAGGTGCACATAAGAGAGAAGAATTTCTCTTGTACTATGTGTGACCAGAAGTTTTTTTCGCGGACGCATGTTCAGAAAcacatggtgaagcattttggtgagagggtgcaccaatgcgatgtttgcaagaagtcgtatgcgaggaaacagactctgaaggatcacatgaggatacatgacaacgataagagattcatatgttctgtgtgcagtcaagggttcgtgcagaacaatagtatgAGGTTGCATATGAGAGTGCACCACCCTGAAGTTGTGAATTCTTGA
Protein Sequence: MEFDEIVVKESPGLCRCCLSEGCYKDLGSEYTWMNETEVYADMLLECFDISITQHNEGPNGPNRLICEVCITRLRDACNFKKQVLDSEKKFIDMMGRGEFRPKMLIYQTQMKCEEAPAEAPIEEAEVEYLDDDMDFVDDTGEALKDETEPTVSDITVSSLPVKGKRGRPRKNLVKPEKKAKVAKLEDKPKSSKAVAKGVKLRAEASSKSSMTSTKRNKLMKRNAIIVLENSNALPFKWHRQNYLCFYCHLTFKDTSLLKEHTKNEHRKPNIKAAVSYLRRDEKVKIDVSCLQCRICDSNLDSLNNLTEHLKVSHSKIFDEEYGYGLIPYYLQNDVFHCAICEEEFQYFIKLNQHMNEHFGNYICELCGKSFLSQDRLRCHSLTHGSGFRCNECPETFDSLTQKNNHEAKVHNKDKLLKCFFCTQTFANYNQRKRHHHTMHDVKIPEYNCPVCGKTFEIMSKMKVHLKEVHIREKNFSCTMCDQKFFSRTHVQKHMVKHFGERVHQCDVCKKSYARKQTLKDHMRIHDNDKRFICSVCSQGFVQNNSMRLHMRVHHPEVVNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00281759;
90% Identity: iTF_00282805;
80% Identity: -